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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101029g2.3278.mrna |
| Orig protein id | gnl|cribi|Naga_101029g2.3278 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:102678..104510 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5094 ID=rna5094|Name=rna5094|organism=Nannochloropsis gaditana|type=mRNA|length=201bp
ATGTGTGCAGGGATACCCCGTGGTGGCCTTGGTGGGCTATACCAACAGCG
GAAAGTCGACACTCCTGAACCGGCTCACGCAGGCGGGGGCGCTCGCCGAG
GACCTACTCTTTGCCACGCTGGACCCTACCACACGGCTCTTTCCCGTCCA
TACTCCTCACGGACACTGTGGGGTTCATCCAGAAGCTTCCGACACAACTG
A back to topprotein sequence of rna5094 >rna5094-protein ID=rna5094-protein|Name=rna5094|organism=Nannochloropsis gaditana|type=polypeptide|length=156bp
MPSLLPLSCLMLLSLLGSCAFFLPARPSSSLISRSLFITSSPSLPTSSSA
LHARKKRPKEQDWMEVLAESGGMEEKEEGIWPAAPAPWEASFVGTSLDPL
MLDPDDFDEEELGMMAMLNQEEEEEDLPVLEVEQVLDLSLGNMEYREDEV
CKSITV back to topmRNA from alignment at CM002465.1:102678..104510- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5094 ID=rna5094|Name=rna5094|organism=Nannochloropsis gaditana|type=mRNA|length=1833bp|location=Sequence derived from alignment at CM002465.1:102678..104510- (Nannochloropsis gaditana)
CTACTTCCGCCCGCCTCGCGTGTCAAGCGACACGGCAACGTTTTGGTATT
ATTTCATCGAGCATTGAAGTACTCGCACGGGTATCTGGGCGCGACACTTT
CTGCACTTTGTGTGCAAAAGACTGGCAAGTCGACTGTGTTGGACCCTCGG
AACGCGAATAAGGCTCCCCACTCGGACTCGAAGGGTGTTACAACTCACTT
TTCACGGGAACACTGTAAACCCTTGTCCAATTTTCCCCACCCCGTCCAGA
ACACCAGCATCTACACAATAAATAAACTTTAAAACCTCCTCGTGTGGCCT
CGGGTTCTGTGGACAAGGCTTGAAGCACTCCGCAAACCCCTCCGCTGTCA
CAAGCTCTGACAAAAGGTGGGCTTGGAGGGATGAGTACCGTGTGTAGAAT
CGTACCGCGCTTCCATACCCTCTCTTTCCTCTTGTGGGCTGGCTTTCTTT
TGCGATCTCGGGCTCGACGCTTATTTACTGCGGCATATTTGGTTTCATGA
TCTTATTTTTGATCCCTCCCGGCGATGGAGGTGGACAGCCTACCTCGTCC
TGGTAGACGTGCATCTCATTTAATCACCTCTGCCCTCCTTGATTCGTCCT
TCTCTTTCATTCTACTCCAGCTGCGTGAATTGAAGGCGCCATGCCGTCCC
TCCTACCGTTGTCCTGCCTCATGCTCCTTTCCCTGCTGGGCTCATGTGCC
TTCTTTCTGCCTGCACGTCCCTCTTCCTCCTTAATTTCTCGCTCCCTCTT
CATCACCTCATCACCCTCCCTCCCCACATCTTCATCTGCCTTACATGCTC
GCAAAAAACGGCCCAAAGAGCAAGATTGGTGCGTCGCCGGGATGCAGGAT
GTTTCCCGACGTGTCACACCTTCTCACCTTCGCCCTCCCGCCCTCCTTTC
CTCCCTCCCTCCCTCCCACCCTCCCTCTTTCCCTCCCTCCCTCCCGCTTC
ACACTCAGGATGGAAGTCCTGGCGGAATCGGGGGGTATGGAAGAGAAGGA
GGAGGGCATTTGGCCGGCCGCCCCGGCCCCCTGGGAGGCATCCTTCGTCG
GGACCTCATTAGATCCGTTGATGCTGGACCCCGGTAGGGAGGGAGGGAGG
GGGGAAGCGAGGGAGGGGGGGGGGGGAGGAAAAGGAGTGGTTGTCGATTT
AGGTTCCTGACTACTGGGCTCTTTCTTCACGGGGTGGCAGATGACTTTGA
TGAAGAGGAGTTGGGGATGATGGCCATGTTGAACCAGGTAAGAAGGAAGG
GGGAAGGAAAGGACGGGGGGGAGGGCGGGGTGGAGGTCCCGCTTTCATTC
CCTCACCTCGCTCGCATGCTCGGTGATGAACAGGAAGAGGAGGAGGAGGA
CCTTCCGGTGCTGGAGGTAGAGCAAGTCCTAGACTTGTCCTTAGGCAACA
TGGAGTACCGGGAGGACGAGGTATGTAAATCTATTACTGTGTAGGGAGGG
AGGGAGGGAAAGGAAAGAAAGAAGGAAGCAAGGAGGCATTGCCGGAGATT
GTGAGTGGTTCTGCTGTGTTTCTCCTTCCAGCGGGCCGGCAGAGGGCGCC
CTGAGACCCCAATAGAGGTGTACTGTGTTCCAAAATCCGTTACACTTGCG
TGGACGAAACCGTTCGAGGTTTTGGGAAATACCGGTCGGAGAATCTGGCC
CGGGCTATGACCCTTGTTTCCCTTGTGTACTTTTTTGGGCCCTGGACACT
GGCAGGATTGGGAGGGCGAGGAAAACAGCGAAAAATACCGACAGGCGCGG
AACCGGGCGAAAGCCTCCTCCCTCCATGACACCGTGGTGGAGCACGCGGG
GAGGTTCTACGAGCATTACAACGGGCGGTAGGA back to topCoding sequence (CDS) from alignment at CM002465.1:102678..104510- >rna5094 ID=rna5094|Name=rna5094|organism=Nannochloropsis gaditana|type=CDS|length=1884bp|location=Sequence derived from alignment at CM002465.1:102678..104510- (Nannochloropsis gaditana)
GAAGAGGAGGAGGAGGACCTTCCGGTGCTGGAGGTAGAGCAAGTCCTAGA
CTTGTCCTTAGGCAACATGGAGTACCGGGAGGACGAGGTATGTAAATCTA
TTACTGTGTAGATGACTTTGATGAAGAGGAGTTGGGGATGATGGCCATGT
TGAACCAGGATGGAAGTCCTGGCGGAATCGGGGGGTATGGAAGAGAAGGA
GGAGGGCATTTGGCCGGCCGCCCCGGCCCCCTGGGAGGCATCCTTCGTCG
GGACCTCATTAGATCCGTTGATGCTGGACCCCGATGCCGTCCCTCCTACC
GTTGTCCTGCCTCATGCTCCTTTCCCTGCTGGGCTCATGTGCCTTCTTTC
TGCCTGCACGTCCCTCTTCCTCCTTAATTTCTCGCTCCCTCTTCATCACC
TCATCACCCTCCCTCCCCACATCTTCATCTGCCTTACATGCTCGCAAAAA
ACGGCCCAAAGAGCAAGATTGGAAGAGGAGGAGGAGGACCTTCCGGTGCT
GGAGGTAGAGCAAGTCCTAGACTTGTCCTTAGGCAACATGGAGTACCGGG
AGGACGAGGTATGTAAATCTATTACTGTGTAGATGACTTTGATGAAGAGG
AGTTGGGGATGATGGCCATGTTGAACCAGGATGGAAGTCCTGGCGGAATC
GGGGGGTATGGAAGAGAAGGAGGAGGGCATTTGGCCGGCCGCCCCGGCCC
CCTGGGAGGCATCCTTCGTCGGGACCTCATTAGATCCGTTGATGCTGGAC
CCCGATGCCGTCCCTCCTACCGTTGTCCTGCCTCATGCTCCTTTCCCTGC
TGGGCTCATGTGCCTTCTTTCTGCCTGCACGTCCCTCTTCCTCCTTAATT
TCTCGCTCCCTCTTCATCACCTCATCACCCTCCCTCCCCACATCTTCATC
TGCCTTACATGCTCGCAAAAAACGGCCCAAAGAGCAAGATTGGAAGAGGA
GGAGGAGGACCTTCCGGTGCTGGAGGTAGAGCAAGTCCTAGACTTGTCCT
TAGGCAACATGGAGTACCGGGAGGACGAGGTATGTAAATCTATTACTGTG
TAGATGACTTTGATGAAGAGGAGTTGGGGATGATGGCCATGTTGAACCAG
GATGGAAGTCCTGGCGGAATCGGGGGGTATGGAAGAGAAGGAGGAGGGCA
TTTGGCCGGCCGCCCCGGCCCCCTGGGAGGCATCCTTCGTCGGGACCTCA
TTAGATCCGTTGATGCTGGACCCCGATGCCGTCCCTCCTACCGTTGTCCT
GCCTCATGCTCCTTTCCCTGCTGGGCTCATGTGCCTTCTTTCTGCCTGCA
CGTCCCTCTTCCTCCTTAATTTCTCGCTCCCTCTTCATCACCTCATCACC
CTCCCTCCCCACATCTTCATCTGCCTTACATGCTCGCAAAAAACGGCCCA
AAGAGCAAGATTGGAAGAGGAGGAGGAGGACCTTCCGGTGCTGGAGGTAG
AGCAAGTCCTAGACTTGTCCTTAGGCAACATGGAGTACCGGGAGGACGAG
GTATGTAAATCTATTACTGTGTAGATGACTTTGATGAAGAGGAGTTGGGG
ATGATGGCCATGTTGAACCAGGATGGAAGTCCTGGCGGAATCGGGGGGTA
TGGAAGAGAAGGAGGAGGGCATTTGGCCGGCCGCCCCGGCCCCCTGGGAG
GCATCCTTCGTCGGGACCTCATTAGATCCGTTGATGCTGGACCCCGATGC
CGTCCCTCCTACCGTTGTCCTGCCTCATGCTCCTTTCCCTGCTGGGCTCA
TGTGCCTTCTTTCTGCCTGCACGTCCCTCTTCCTCCTTAATTTCTCGCTC
CCTCTTCATCACCTCATCACCCTCCCTCCCCACATCTTCATCTGCCTTAC
ATGCTCGCAAAAAACGGCCCAAAGAGCAAGATTG back to top
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