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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100813g1.3595.mrna |
| Orig protein id | gnl|cribi|Naga_100813g1.3595 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:99019..100418 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5091 ID=rna5091|Name=rna5091|organism=Nannochloropsis gaditana|type=mRNA|length=2240bp
CAGCTAGTCAAGTCGATCATGTGCAATTTATAGTATTTCAAAACAGAAAG
GAGATGGATTTTGTCGTCCGATGACATGAATCGTCAATGGCACCGCATAC
ATCTATATTTCAAAGGTTCAAGGACTGACACCACTCGGTAGCAGAAAGAA
GCGAGACGAAGAGGCTAGTTGGTGTCAATAGCAACGAAGAATTTTGGGAT
CGAATTCTCACACTTCGAACCCTATAAATAAATTTACTTATTATAGGACA
AGCAACACACATGCCAAGCCTTTTTCTGAAATTCTGTCTCTGGTTTATTT
TTTGGATCGACGTGTTGCCGCAGCAAGTTCAGGGTTACCATCCTCCTTAC
CGCCCATTTTGCGCCCGAGTCTCAGGAGATCAAAAACAGCCATTCTGTTG
TCGGGAGCAATGTACCCTTCGAAAAGCATCGCAGTCGATACCCTCTTCTG
ACTTTACTCGCAGAAGTATCCGCACAAGCCCTACATACGACACTGTGGCC
CATACCAATCCCTCGATTCGCCCTTCTCCTATCTCTCCTCCAAAGGCTCA
AGGCATGATCTCATCAAACAAGCATACCCTGAAGTCACACCACCCTTGGC
ACCCGTACATTGAAGTCTTGCGTCCTCAAAACGTTCTGCCATCTGCTTTC
CTAGTCCTGATAGGAGCTTGGATCACGACGCGGGATTTGCGACTGGTGCT
GAGCCCCCTGGTGGCACAAATGGCCATCACCTCTGCCCTCGTGGCTGTCG
GCTCCTGTGTCCTCAACGACTACTTCGACCGGGGAGTCGACCGTATCAAC
CATCCAGAGCGCACCCTCGTTCAGGGCCAAATTCGACCCATTTATGCCCT
TCTTCTCGCTCTATCCTGCCTGACAACAGCCCTTCTTTTGGGTAACATTG
ACCTGTCCTGCACGATCCACCGCGCATTTGCTTCCGTACCAGTGGCGGGG
CAACCCTCAACGTCATACCTCTCTCCTCCTCCCATGCGGTGGGCCACTGC
AAGGACCCTAACGCCACACTCGTACACTGAAAGTACCAGGCGATTGCTCC
GTCGCATTGTTCAAACTGCCGTGGCAGCCGTGGTCCTCTACACTCCTGTT
TTCAAACCGTTTCCCTTCCTTAAAAACGGCGTTGTCGCGCTTGTAATCGC
CGCTTCAGTTGCTTTAGGCGGGCTCGCGGCGGCTACGACCGCAACCTTGT
CCTCCCTCCCGTCCTCCCTCCCTCCTTCCCTTCTCGCAGCGGTCATCACC
GTGTCTTGCCACATTTTCCACCGGGAGATTCTAATGGACATCGACGACAT
CGCAGGGGACCACGCCGGGGGCATCCTGACCTTACCCCGCCTCCTCGGGA
AGCCCCTTTCTCTCTCTCTGGGCGGGGTTTTGGTGGCCGTGAGCACGTGG
GTGAGTGCCCGCCTGGTCGTCATTCAACACGCTTTGACATTTTCTTCGCT
TTTCTCCCTTTTCAATGGGCCTGGCTTGCTGGCTTTCAGGGCCGCCTGGG
GCGCGGCCGGCCCACACGGCACGGCGGGAGGGGCGCTGGGTGGCTGGGTG
GCCCTGGGAAGTATCTGCGTGGCAGGGGTGGTTGTATGCTTGTACGACTG
GCGGGTCGTGTGGAGGGGTGGATTTCGGGGAAGAGATGTGGAGCGAGGAG
TGAAATGGGCACCCTTGGCGATGCTGACAGTGCTCCTTGTGCTGGGCGCG
GTGTAGGCAAGGGGTTAGGAAGGGAAGGAGAGAGGGAGGAAGCTACCAGC
ACTGATGGACATATTGCGGTATGTTGTTGTTAAACTATGGTGTACATGCT
CCGGGGGATGAGGTACGTGTAAGAATGTCAATCTATTGGTACGCCGTGAC
CGGAGCTATTCACGCTGGCCTAGATTGGTTTGCCAGACGAGGGGGATGTC
GATTATCCGCCAGCAGAGCTTGGCATGTAAGATAGCATTAATGTAAGCAT
ATGTACATTCAAAGATGTGGGGGCACACACGTGCTCGCGCTTAGTTTAAG
CTGCGCTGGAATGCGGTACATTTCTAGCATGTAAGCCCTTTGACTCAAGG
GACGGTTGGCAACGCCAAGCGCTTCTGGGTCCATAGCCCCCTTATACATG
CCTGAGTATCAAAATAGCACAATAATGACCTCAACGACCGTGACCAAAGA
AAAGGAACACGAGCATCGTACTTGGGGATGACGATAATGCACAATCTCCT
TCTTCCATCACCCTGCGTCTCGGTCCTTCCTCTTGTCCCT back to topprotein sequence of rna5091 >rna5091-protein ID=rna5091-protein|Name=rna5091|organism=Nannochloropsis gaditana|type=polypeptide|length=136bp
GNLREGGGGRGQEKGRKRCVSRGQGRRCRVSLPPGAFLRLWAVPNDLSSL
SGVPSFPLLFFHLPCRFPLSRAEVSLFNVDENSCNSFAFCFFLLLLPPSL
LPSLRTWPSACSRIGWTVGHSRTSKWRKGKRSTGGP back to topmRNA from alignment at CM002465.1:99019..100418- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5091 ID=rna5091|Name=rna5091|organism=Nannochloropsis gaditana|type=mRNA|length=1400bp|location=Sequence derived from alignment at CM002465.1:99019..100418- (Nannochloropsis gaditana)
GGGAACCTGAGGGAGGGGGGAGGGGGGCGGGGGCAGGAGAAGGGTCGAAA
GAGATGCGTCAGTCGTGGGCAAGGAAGAAGGTGTAGGGTTTCCTTACCTC
CGGGCGCCTTCCTCCGTCTCTGGGCGGTCCCCAATGATCTCTCCTCTTTG
TCCGGCGTTCCCTCTTTTCCCCTCCTTTTCTTCCACCTGCCCTGCCGTTT
TCCCCTCTCTCGGGCGGAAGTGAGTCTTTTCAACGTTGATGAGAATTCTT
GCAACTCATTTGCATTTTGCTTTTTCCTTCTTCTCCTCCCTCCCTCCCTC
CTTCCCTCCCTCAGGACCTGGCCATCCGCCTGCTCCCGTATCGGGTGGAC
AGTGGGGCACAGTCGTACAAGCAAGTGGAGGAAGGGCAAGAGATCGACTG
GGGGGCCCTAGCCAAAGGGAGGCACGTGTACAAGGAGCGGCTGCAACGCG
GAGAAGTCACGGCTTTACCCACAGGAAGCGTGCCAGTCGCGTCCTACAAG
GTAACGGCCGCCGCAGCGTGATAGTTGGTTGGGGGGGGTGAACAGGGATG
TACGAATAGCTTTTTCTTGGAAGAAGGTTTTTGACTCAAGACTTGGAGGG
GCGAAAACGGAGGAAAATGAACAGGAAGCTTTGATTTAGAAAATGTGAAC
ACCAGCCATATGGATTCGATGACATCGGTCGAAAAGGAGAAGAATGACCC
CTGCAGTATAGAAACCGCAAAAGCCGCCATAGCGCCCCATGTGTCGTGTG
ACATCGCGGGTGTGTAGTTCATAATTATGTCTCTCTCTTTCTTGAGGGGA
TGGAATGATAAGGTGTCAATAATGTGCGTTGGGAAAGACGTGGAGAGCAA
GGAGCTGTCGAAACGTACAGCGGCCGGGGGGAAGTCTCTGCGAACCCTGG
TAGGGCCCGCCGAGGGACAAGAGGAAGGACCGAGACGCAGGGTGATGGAA
GAAGGAGATTGTGCATTATCGTCATCCCCAAGTACGATGCTCGTGTTCCT
TTTCTTTGGTCACGGTCGTTGAGGTCATTATTGTGCTATTTTGATACTCA
GGCATGTATAAGGGGGCTATGGACCCAGAAGCGCTTGGCGTTGCCAACCG
TCCCTTGAGTCAAAGGGCTTACATGCTAGAAATGTACCGCATTCCAGCGC
AGCTTAAACTAAGCGCGAGCACGTGTGTGCCCCCACATCTTTGAATGTAC
ATATGCTTACATTAATGCTATCTTACATGCCAAGCTCTGCTGGCGGATAA
TCGACATCCCCCTCGTCTGGCAAACCAATCTAGGCCAGCGTGAATAGCTC
CGGTCACGGCGTACCAATAGATTGACATTCTTACACGTACCTCATCCCCC
GGAGCATGTACACCATAGTTTAACAACAACATACCGCAATATGTCCATCA
back to topCoding sequence (CDS) from alignment at CM002465.1:99019..100418- >rna5091 ID=rna5091|Name=rna5091|organism=Nannochloropsis gaditana|type=CDS|length=411bp|location=Sequence derived from alignment at CM002465.1:99019..100418- (Nannochloropsis gaditana)
GGGAACCTGAGGGAGGGGGGAGGGGGGCGGGGGCAGGAGAAGGGTCGAAA
GAGATGCGTCAGTCGTGGGCAAGGAAGAAGGTGTAGGGTTTCCTTACCTC
CGGGCGCCTTCCTCCGTCTCTGGGCGGTCCCCAATGATCTCTCCTCTTTG
TCCGGCGTTCCCTCTTTTCCCCTCCTTTTCTTCCACCTGCCCTGCCGTTT
TCCCCTCTCTCGGGCGGAAGTGAGTCTTTTCAACGTTGATGAGAATTCTT
GCAACTCATTTGCATTTTGCTTTTTCCTTCTTCTCCTCCCTCCCTCCCTC
CTTCCCTCCCTCAGGACCTGGCCATCCGCCTGCTCCCGTATCGGGTGGAC
AGTGGGGCACAGTCGTACAAGCAAGTGGAGGAAGGGCAAGAGATCGACTG
GGGGGCCCTAG back to top
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