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Properties
| Property Name | Value |
|---|
| Product | prenyltransferase |
| Orig transcript id | gnl|cribi|Naga_100813g4.3597.mrna |
| Orig protein id | gnl|cribi|Naga_100813g4.3597 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:96852..99506 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5090 ID=rna5090|Name=rna5090|organism=Nannochloropsis gaditana|type=mRNA|length=1169bp
CCTCCCTCCCTTCCTCCTTCCTTCCCTCTTTCCCTCCCAGGTCCGGAAGA
ACAGTGAGGCCACGACGGACGAGGAGCGCTATCGTCTGCAGACTATCGGG
CATTATCATCTTGGCGACTTTGTGAACCGCTTTGTCCGAGGCTCCCTGGT
GATGCAGCCTAAGGAAGGCGAGGTAGGGAGGGAGGATGGGAGGGGGGACG
GGAAGGAGGGAGTGGTTGAGAACGGGCGAGTCATTTTTAAGCACGTTGTG
GACCGGAAAAGGGGGGATATTCACACGACGATAAGCAGGGGGGGAAATTG
GTTCTTGGATGTGTGTGAAAATCACTGCTCATCGTCCCTTCCTCGGTTCA
CCCTGTCCTACAGAGGGAGGGTGGGAAGGAGGGCGGGAAGGAGGGCGGGA
AGGAGGGCGGGAAGGACGAGGAGGAGGCCATGGCCGGGACCGAAAATCCT
CTGGGAGGAGAAAAGGGAGAAGAAAAGGACGAGAAAGTGGGGGATAAGGA
GAAAGAGGGCCGCCGCAGCGGCGGGGAAGTAGCACGTGGGCATGTGCAGG
ACCTGGGGCTGATGTTCGGGACGCAACAGGGGATGATTGGATCCATCCTA
CCCATTTCCGAGGAGGATTACCGCTTCTTCGTGGCCCTGACCAAGTGTTT
GAACAAGGTGGTGAAAGGCGTGGGTGGACTTTCGCATGAAGAATATCGCC
GATTTTTAACGGACAAGGCCATTTCAGATACGCAAGGATTCGTCGATGGG
GACTTGATCGAGTCGTTCCTGGAGCTCCCGACGCAGCGGATGGAGGAGGT
GGTGGAGCTGATGCGGGTTGAGGGAGTGGGCGGAGAGAGCAAGACTGATG
CTGCCCTTTGCGACCAGGCGGGAGGGGGGAAGGGAGAGGGGAAGATGGAA
GTGGTGGGGTTGCAAGAGCATGCCGGAAAGGAGGAGGAAAAGAAAGATGG
GGTGCTCTCATTGGATGAGGTGTATCGACGCGTGGAGGACATGACGCGAT
TGCATTGAAAGGGGTGGTCTGAGACTAGGAGGGCTGGTCGATCCCTTCAA
AAATCTCGGGGGGGAAAAAAATATAGAGGCGTTGAGGCGGGTTGAATAAG
TCATGTAGAATGCGGCGTTTTCCACGATATATGCGAAGGAACCCATGTCA
AAAGATTGCCATATTTTTA back to topprotein sequence of rna5090 >rna5090-protein ID=rna5090-protein|Name=rna5090|organism=Nannochloropsis gaditana|type=polypeptide|length=481bp
MPSLFLKFCLWFIFWIDVLPQQVQGYHPPYRPFCARVSGDQKQPFCCREQ
CTLRKASQSIPSSDFTRRSIRTSPTYDTVAHTNPSIRPSPISPPKAQGMI
SSNKHTLKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPL
VAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLA
LSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTL
TPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASV
ALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGD
HAGGILTLPRLLGKPLSLSLGGVLVAVSTWVSARLVVIQHALTFSSLFSL
FNGPGLLAFRAAWGAAGPHGTAGGALGGWVALGSICVAGVVVCLYDWRVV
WRGGFRGRDVERGVKWAPLAMLTVLLVLGAV back to topmRNA from alignment at CM002465.1:96852..99506+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5090 ID=rna5090|Name=rna5090|organism=Nannochloropsis gaditana|type=mRNA|length=2655bp|location=Sequence derived from alignment at CM002465.1:96852..99506+ (Nannochloropsis gaditana)
CAGCTAGTCAAGTCGATCATGTGCAATTTATAGTATTTCAAAACAGAAAG
GAGATGGATTTTGTCGTCCGATGACATGAATCGTCAATGGCACCGCATAC
ATCTATATTTCAAAGGTTCAAGGACTGACACCACTCGGTAGCAGAAAGAA
GCGAGACGAAGAGGCTAGTTGGTGTCAATAGCAACGAAGAATTTTGGGAT
CGAATTCTCACACTTCGAACCCTATAAATAAATTTACTTATTATAGGACA
AGCAACACACATGCCAAGCCTTTTTCTGAAATTCTGTCTCTGGTTTATTT
TTTGGATCGACGTGTTGCCGCAGCAAGTTCAGGGTTACCATCCTCCTTAC
CGCCCATTTTGCGCCCGAGTCTCAGGAGATCAAAAACAGCCATTCTGTTG
TCGGGAGCAATGTACCCTTCGAAAAGCATCGCAGTCGATACCCTCTTCTG
ACTTTACTCGCAGAAGTATCCGCACAAGCCCTACATACGACACTGTGGCC
CATACCAATCCCTCGATTCGCCCTTCTCCTATCTCTCCTCCAAAGGCTCA
AGGCATGATCTCATCAAACAAGCATACCCTGAAGTCACACCACCCTTGGC
ACCCGTACATTGAAGTCTTGCGTCCTCAAAACGTTCTGCCATCTGCTTTC
CTAGTCCTGATAGGAGCTTGGATCACGACGCGGGATTTGCGACTGGTGCT
GAGCCCCCTGGTGGCACAAATGGGTAAGTAACAGAATATACTGATCGAAT
CATGAGATGGTGTGTAGCTTTGTTAGATATGATTTCGGACAACGCGTTCT
TCGAAGGGAAAAATGCTTTCGTGTACGCTAGGTGCGGCCGACTTGTAGCA
ACTTCCTTGTGCTTAAAAATGCAAGATTGACAAAAAATTGTCTTCAAAGA
ATGCGTCAAGTAATGCATGTGTCGAAGGGAAAACCCCTGAATGGATAAAT
ACATGAGCAAGCTATGACCACGAGTTATCAATGTCGGCGAGTGAGTGATT
GTTCTACTTTTTAAAAATGCCTCAGATGATTCGAACGACAATGTGGATGT
CTGTGAAGAGATGGCTTGAGGCTAATAAAACAGCCATACAAATCCACCCA
TTTTTCATCTCCCCACAATTCCTTTTTCCTACCCACAGCCATCACCTCTG
CCCTCGTGGCTGTCGGCTCCTGTGTCCTCAACGACTACTTCGACCGGGGA
GTCGACCGTATCAACCATCCAGAGCGCACCCTCGTTCAGGGCCAAATTCG
ACCCATTTatgcccttcttctcgctctATCCTGCCTGACAACAGCCCTTC
TTTTGGGTAACATTGACCTGTCCTGCACGATCCACCGCGCATTTGCTTCC
GTACCAGTGGCGGGGCAACCCTCAACGTCAtacctctctcctcctcccat
gcgGTGGGCCACTGCAAGGACCCTAACGCCACACTCGTACACTGAAAGTA
CCAGGCGATTGCTCCGTCGCATTGTTCAAACTGCCGTGGCAGCCGTGGTC
CTCTACACTCCTGTTTTCAAACCGTTTCCCTTCCTTAAAAACGGCGTTGT
CGCGCTTGTAATCGCCGCTTCAGTTGCTTTAGGCGGGCTCGCGGCGGCTA
CGACCGcaaccttgtcctccctcccgtcctccctccctccttcccttctc
gcAGCGGTCATCACCGTGTCTTGCCACATTTTCCACCGGGAGATTCTAAT
GGACATCGACGACATCGCAGGGGACCACGCCGGGGGCATCCTGACCTtac
cccgcctcctcgggaagcccctttctctctctctgggCGGGGTTTTGGTG
GCCGTGAGCACGTGGGTGAGTGCCCGCCTGGTCGTCATTCAACACGCTTT
GACATTTTCTtcgcttttctcccttttcaatGGGCCTGGCTTGCTGGCTT
TCAGGGCCGCCTGGGGCGCGGCCGGCCCACACGgcacggcgggaggggcg
ctgGGTGGCTGGGTGGCCCTGGGAAGTATCTGCGTGGCAGGGGTGGTTGT
ATGCTTGTACGACTGGCGGGTCGTGTGGAGGGGTGGATTTCGGGGAAGAG
ATGTGGAGCGAGGAGTGAAATGGGCACCCTTGGCGATGCTGACAGTGCTC
CTTGTGCTGGGCGCGGTGTAGGCAAGGGGttaggaagggaaggagagagg
gaggaagctaCCAGCACTGATGGACATATTGCGGTATGTTGTTGTTAAAC
TATGGTGTACATGCTCCGGGGGATGAGGTACGTGTAAGAATGTCAATCTA
TTGGTACGCCGTGACCGGAGCTATTCACGCTGGCCTAGATTGGTTTGCCA
GACGAGGGGGATGTCGATTATCCGCCAGCAGAGCTTGGCATGTAAGATAG
CATTAATGTAAGCATATGTACATTCAAAGATGTGGGGGCACACACGTGCT
CGCGCTTAGTTTAAGCTGCGCTGGAATGCGGTACATTTCTAGCATGTAAG
CCCTTTGACTCAAGGGACGGTTGGCAACGCCAAGCGCTTCTGGGTCCATA
GCCCCCTTATACATGCCTGAGTATCAAAATAGCACAATAATGACCTCAAC
GACCGTGACCAAAGAAAAGGAACACGAGCATCGTACTTGGGGATGACGAT
AATGCACaatctccttcttccatcaCCCTGCGTCTcggtccttcctcttg
tcccT back to topCoding sequence (CDS) from alignment at CM002465.1:96852..99506+ >rna5090 ID=rna5090|Name=rna5090|organism=Nannochloropsis gaditana|type=CDS|length=2892bp|location=Sequence derived from alignment at CM002465.1:96852..99506+ (Nannochloropsis gaditana)
ATGCCAAGCCTTTTTCTGAAATTCTGTCTCTGGTTTATTTTTTGGATCGA
CGTGTTGCCGCAGCAAGTTCAGGGTTACCATCCTCCTTACCGCCCATTTT
GCGCCCGAGTCTCAGGAGATCAAAAACAGCCATTCTGTTGTCGGGAGCAA
TGTACCCTTCGAAAAGCATCGCAGTCGATACCCTCTTCTGACTTTACTCG
CAGAAGTATCCGCACAAGCCCTACATACGACACTGTGGCCCATACCAATC
CCTCGATTCGCCCTTCTCCTATCTCTCCTCCAAAGGCTCAAGGCATGATC
TCATCAAACAAGCATACCCTGAAGTCACACCACCCTTGGCACCCGTACAT
TGAAGTCTTGCGTCCTCAAAACGTTCTGCCATCTGCTTTCCTAGTCCTGA
TAGGAGCTTGGATCACGACGCGGGATTTGCGACTGGTGCTGAGCCCCCTG
GTGGCACAAATGGCCATCACCTCTGCCCTCGTGGCTGTCGGCTCCTGTGT
CCTCAACGACTACTTCGACCGGGGAGTCGACCGTATCAACCATCCAGAGC
GCACCCTCGTTCAGGGCCAAATTCGACCCATTTatgcccttcttctcgct
ctATCCTGCCTGACAACAGCCCTTCTTTTGGGTAACATTGACCTGTCCTG
CACGATCCACCGCGCATTTGCTTCCGTACCAGTGGCGGGGCAACCCTCAA
CGTCAtacctctctcctcctcccatgcgGTGGGCCACTGCAAGGACCCTA
ACGCCACACTCGTACACTGAAAGTACCAGGCGATTGCTCCGTCGCATTGT
TCAAACTGCCGTGGCAGCCGTGGTCCTCTACACTCCTGTTTTCAAACCGT
TTCCCTTCCTTAAAAACGGCGTTGTCGCGCTTGTAATCGCCGCTTCAGTT
GCTTTAGGCGGGCTCGCGGCGGCTACGACCGcaaccttgtcctccctccc
gtcctccctccctccttcccttctcgcAGCGGTCATCACCGTGTCTTGCC
ACATTTTCCACCGGGAGATTCTAATGGACATCGACGACATCGCAGGGGAC
CACGCCGGGGGCATCCTGACCTtaccccgcctcctcgggaagcccctttc
tctctctctgggCGGGGTTTTGGTGGCCGTGAGCACGTGGGTGAGTGCCC
GCCTGGTCGTCATTCAACACGCTTTGACATTTTCTtcgcttttctccctt
ttcaatGGGCCTGGCTTGCTGGCTTTCAGGGCCGCCTGGGGCGCGGCCGG
CCCACACGgcacggcgggaggggcgctgGGTGGCTGGGTGGCCCTGGGAA
GTATCTGCGTGGCAGGGGTGGTTGTATGCTTGTACGACTGGCGGGTCGTG
TGGAGGGGTGGATTTCGGGGAAGAGATGTGGAGCGAGGAGTGAAATGGGC
ACCCTTGGCGATGCTGACAGTGCTCCTTGTGCTGGGCGCGGTGTAGATGC
CAAGCCTTTTTCTGAAATTCTGTCTCTGGTTTATTTTTTGGATCGACGTG
TTGCCGCAGCAAGTTCAGGGTTACCATCCTCCTTACCGCCCATTTTGCGC
CCGAGTCTCAGGAGATCAAAAACAGCCATTCTGTTGTCGGGAGCAATGTA
CCCTTCGAAAAGCATCGCAGTCGATACCCTCTTCTGACTTTACTCGCAGA
AGTATCCGCACAAGCCCTACATACGACACTGTGGCCCATACCAATCCCTC
GATTCGCCCTTCTCCTATCTCTCCTCCAAAGGCTCAAGGCATGATCTCAT
CAAACAAGCATACCCTGAAGTCACACCACCCTTGGCACCCGTACATTGAA
GTCTTGCGTCCTCAAAACGTTCTGCCATCTGCTTTCCTAGTCCTGATAGG
AGCTTGGATCACGACGCGGGATTTGCGACTGGTGCTGAGCCCCCTGGTGG
CACAAATGGCCATCACCTCTGCCCTCGTGGCTGTCGGCTCCTGTGTCCTC
AACGACTACTTCGACCGGGGAGTCGACCGTATCAACCATCCAGAGCGCAC
CCTCGTTCAGGGCCAAATTCGACCCATTTatgcccttcttctcgctctAT
CCTGCCTGACAACAGCCCTTCTTTTGGGTAACATTGACCTGTCCTGCACG
ATCCACCGCGCATTTGCTTCCGTACCAGTGGCGGGGCAACCCTCAACGTC
AtacctctctcctcctcccatgcgGTGGGCCACTGCAAGGACCCTAACGC
CACACTCGTACACTGAAAGTACCAGGCGATTGCTCCGTCGCATTGTTCAA
ACTGCCGTGGCAGCCGTGGTCCTCTACACTCCTGTTTTCAAACCGTTTCC
CTTCCTTAAAAACGGCGTTGTCGCGCTTGTAATCGCCGCTTCAGTTGCTT
TAGGCGGGCTCGCGGCGGCTACGACCGcaaccttgtcctccctcccgtcc
tccctccctccttcccttctcgcAGCGGTCATCACCGTGTCTTGCCACAT
TTTCCACCGGGAGATTCTAATGGACATCGACGACATCGCAGGGGACCACG
CCGGGGGCATCCTGACCTtaccccgcctcctcgggaagcccctttctctc
tctctgggCGGGGTTTTGGTGGCCGTGAGCACGTGGGTGAGTGCCCGCCT
GGTCGTCATTCAACACGCTTTGACATTTTCTtcgcttttctcccttttca
atGGGCCTGGCTTGCTGGCTTTCAGGGCCGCCTGGGGCGCGGCCGGCCCA
CACGgcacggcgggaggggcgctgGGTGGCTGGGTGGCCCTGGGAAGTAT
CTGCGTGGCAGGGGTGGTTGTATGCTTGTACGACTGGCGGGTCGTGTGGA
GGGGTGGATTTCGGGGAAGAGATGTGGAGCGAGGAGTGAAATGGGCACCC
TTGGCGATGCTGACAGTGCTCCTTGTGCTGGGCGCGGTGTAG back to top
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