EWM25596.1, cds5078 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|585107392|gb|EWM25596.1| (prenyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 965.296 bits (2494), Expect = 0.000e+0 Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0 Query: 1 MPSLFLKFCLWFIFWIDVLPQQVQGYHPPYRPFCARVSGDQKQPFCCREQCTLRKASQSIPSSDFTRRSIRTSPTYDTVAHTNPSIRPSPISPPKAQGMISSNKHTLKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVSARLVVIQHALTFSSLFSLFNGPGLLAFRAAWGAAGPHGTAGGALGGWVALGSICVAGVVVCLYDWRVVWRGGFRGRDVERGVKWAPLAMLTVLLVLGAV 481 MPSLFLKFCLWFIFWIDVLPQQVQGYHPPYRPFCARVSGDQKQPFCCREQCTLRKASQSIPSSDFTRRSIRTSPTYDTVAHTNPSIRPSPISPPKAQGMISSNKHTLKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVSARLVVIQHALTFSSLFSLFNGPGLLAFRAAWGAAGPHGTAGGALGGWVALGSICVAGVVVCLYDWRVVWRGGFRGRDVERGVKWAPLAMLTVLLVLGAV Sbjct: 1 MPSLFLKFCLWFIFWIDVLPQQVQGYHPPYRPFCARVSGDQKQPFCCREQCTLRKASQSIPSSDFTRRSIRTSPTYDTVAHTNPSIRPSPISPPKAQGMISSNKHTLKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVSARLVVIQHALTFSSLFSLFNGPGLLAFRAAWGAAGPHGTAGGALGGWVALGSICVAGVVVCLYDWRVVWRGGFRGRDVERGVKWAPLAMLTVLLVLGAV 481
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|299470386|emb|CBN80147.2| (Prenyltransferase, UbiA family, Putative 4-hydroxybenzoate octaprenyltransferase (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 108.227 bits (269), Expect = 3.532e-23 Identity = 85/278 (30.58%), Postives = 129/278 (46.40%), Query Frame = 0 Query: 99 MISSNKHTLKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVA 376 M + + K Y E+LRP N+ S LV GA + + + P V A +A V+VGSCVLND+FD +DR+N PER LV G++ P++AL + ++ L A+ S S+++P L+ + +VA + YTP+ KP P +KN + A V +AA A + + S+L PS+L + I HRE+LMDI D+ GD G+ TLP L+G+ +L L++ Sbjct: 1 MATPDSSKEKKSPNLSAYWEILRPNNIPASFGLVAAGALVASHTAVALFEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAAV-----------------------ASASFVNPAA---------------------LQATIVASVALTLAYTPLLKPIPLVKN-----FVVAMVIAAAIAAGGLAAGAGVASTLTPSVLTFFV-----IGHREVLMDIADVEGDREAGVRTLPVLMGRQAALVFATALLS 224
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|926777684|ref|XP_013897316.1| (Digeranylgeranylglyceryl phosphate synthase [Monoraphidium neglectum] >gi|761966615|gb|KIY98296.1| Digeranylgeranylglyceryl phosphate synthase [Monoraphidium neglectum]) HSP 1 Score: 98.9821 bits (245), Expect = 2.035e-19 Identity = 82/252 (32.54%), Postives = 117/252 (46.43%), Query Frame = 0 Query: 114 HPYIEVLRPQNVLPSAFLVLIGAWITT-RDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGK 364 +++ R N+LPS LV++GAW + RDL + +P V M++ S +AV SCV NDYFD VDR N P + L G + ALLL+ +SV A + ++ P LR I+ + A +LYTPVFK +KN VA+VIA + A A A + + LP +L A + REI+MD+ D+ GD A GI TLP ++G+ Sbjct: 15 QALVQLARVHNLLPSFLLVMVGAWAGSGRDLAALRAPGVWLMSLLSGGIAVSSCVFNDYFDVQVDRANAPHKPLASGVLPLDIALLLS-----------------------SSVYCAVLITACFMEPSQ---------------------LRSIIALSAGATLLYTPVFKKLTAIKNATVAVVIALAPLG--GALAAGAGEAGVMRLLPATLFA-----FSGVMFREIVMDLTDLEGDRAAGIKTLPVMIGQ 215
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|551663810|ref|XP_005834669.1| (hypothetical protein GUITHDRAFT_49490, partial [Guillardia theta CCMP2712] >gi|428178815|gb|EKX47689.1| hypothetical protein GUITHDRAFT_49490, partial [Guillardia theta CCMP2712]) HSP 1 Score: 95.5153 bits (236), Expect = 4.942e-19 Identity = 77/243 (31.69%), Postives = 109/243 (44.86%), Query Frame = 0 Query: 121 RPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLG 363 RPQN+ L L G+ +R L + PLV +A+ SA V VGS ++NDYFD + + +G + P ALL A ++ L + +C + +F LR +V ++ LYTP+ K FLKN VVA VIA ++ LGGLA + S+L PSL + C I +E+LMDI D+ GD GI T+P +LG Sbjct: 4 RPQNIPAELGLSLAGSLFASRSLACLADPLVWLVALFSASVGVGSMLINDYFDYRSGADAYKSNPMAEGTVHPEQALLAA-----SSWYLMSFFFACILLESFQ--------------------------------------LRALVSVSLLLTFLYTPLLKGVLFLKNLVVAFVIAQAIVLGGLAVGDV----RMQSTLLPSL-----YMFCLILWQEVLMDIRDVRGDAEAGIRTIPVVLG 194
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|1097598446|emb|SFS74957.1| (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Halostagnicola kamekurae]) HSP 1 Score: 88.9669 bits (219), Expect = 4.345e-16 Identity = 73/259 (28.19%), Postives = 118/259 (45.56%), Query Frame = 0 Query: 107 LKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSC-VLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGK 364 + + +E+ RP NV+ ++ L IGA++ L +P+ A+ + +AVG+ +NDYFDR +DRIN PER + +G + P AL + L L + LS T+ P + A I + A++ YT VFK P + N +VA ++ ++ GG A + L ++ LLAAV T++ REI+ D++D+ GD A G+ TLP +G+ Sbjct: 1 MTAAETARGLLELTRPVNVIAASVLTCIGAFVAGG---LTEAPVAVGSAVAATGLAVGAGNAINDYFDREIDRINQPERAIPRGAVSPNGAL-----AFSVVLFLAAVGLSLTL--------------------PTLAIA--------------------IAGVNLLALIAYTEVFKGLPGIGNALVAYLVGSTFLFGG------AAVGELEAASVLCLLAAVATLT-----REIIKDVEDVDGDRAEGLNTLPIAIGE 200
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|910245888|ref|WP_050050551.1| (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Halostagnicola sp. A56] >gi|635283161|gb|KDE59564.1| prenyltransferase [Halostagnicola sp. A56]) HSP 1 Score: 85.8853 bits (211), Expect = 3.941e-15 Identity = 74/259 (28.57%), Postives = 119/259 (45.95%), Query Frame = 0 Query: 107 LKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGS-CVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGK 364 + + +E+ RP NV+ ++ L IGA++ L +P+ A+ + +AVG+ +NDYFDR +DRIN PER + +G + P AL + L L + LS T+ P + A A LL A++ YT VFK P + N +VA ++ ++ GG A + L ++ LLAA+ T++ REI+ D++D+ GD A G+ TLP +G+ Sbjct: 1 MTAAETARGILELTRPVNVIAASVLTCIGAFVAGG---LTEAPVAVGSAVAATGLAVGAGNAINDYFDREIDRINQPERAIPRGAVSPNGAL-----AFSVVLFLVAVGLSLTL--------------------PTLAIAIAGV-----------NLL---------ALIAYTEVFKGLPGVGNALVAYLVGSTFLFGG------AAVGDLEAASVLCLLAAIATLT-----REIIKDVEDVDGDRAEGLNTLPIAIGE 200
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|493714490|ref|WP_006664061.1| (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Natrialba aegyptia] >gi|445656167|gb|ELZ09007.1| prenyltransferase [Natrialba aegyptia DSM 13077]) HSP 1 Score: 82.0333 bits (201), Expect = 8.759e-14 Identity = 75/273 (27.47%), Postives = 122/273 (44.69%), Query Frame = 0 Query: 118 EVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVSARLVVIQH 390 E+ RP NVL ++ L IGA++ + V +A T V G+ + NDYFDR +DRIN PER + +G + P AL +L L + + L+ T+ R ++V +AG + A+V YT FK P L N +VA ++ ++ G A + + ++ LAA+ T++ REI+ D++D+ GD G+ TLP +G+ +L + L+A+ S V+ H Sbjct: 12 ELTRPVNVLAASVLTFIGAFVAG-GVTAETPETVTAVAATGLAVGAGNAI-NDYFDREIDRINQPERAIPRGAVSPRGALAFSL-----VLFVAAVALALTLPR--SAVAIAG--------------------------------------INLVALVAYTEFFKGLPGLGNALVAYLVGSTFLFG------AAAVGEIGPAVVLCALAAIATLT-----REIIKDVEDVEGDREEGLNTLPIAIGERRALYVAAGLLAIGVLASPLPYVLGH 226
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|1197980575|ref|WP_086889632.1| (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Natrialbaceae archaeon JW/NM-HA 15] >gi|1196601806|gb|ARS91263.1| geranylgeranylglycerol-phosphate geranylgeranyltransferase [Natrialbaceae archaeon JW/NM-HA 15]) HSP 1 Score: 80.8777 bits (198), Expect = 2.245e-13 Identity = 73/267 (27.34%), Postives = 122/267 (45.69%), Query Frame = 0 Query: 117 IEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSC-VLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVS 382 +E+ RP NV+ ++ L IGA++ + PL A+ + +AVG+ +NDYFDR +DRIN PER + +G + P AL+ ++ A + L+ T+ PV L I + A+V YT FK P L N +VA ++ ++ G A + + ++ ++LAAV TV+ REI+ D++D++GD G+ TLP +G+ +L + V++ S Sbjct: 12 LELTRPVNVIAASVLTFIGAFVAGG---VTEYPLEVGAAVAATGLAVGAGNAINDYFDREIDRINQPERAIPRGAVSPRGALVFSIVLFVAA-----VGLALTL-------PV---------------------------------LALAIAGINLVALVAYTEFFKGLPGLGNALVAYLVGSTFLFG------AAAVGDVWPAVTLAILAAVATVT-----REIVKDVEDVSGDREEGLNTLPIAVGERRALVIAAVVLVAGVLAS 219
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|1134715971|ref|WP_076607738.1| (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Natronorubrum thiooxidans] >gi|1131881097|emb|SIR71559.1| geranylgeranylglycerol-phosphate geranylgeranyltransferase [Natronorubrum thiooxidans]) HSP 1 Score: 80.4925 bits (197), Expect = 2.991e-13 Identity = 74/267 (27.72%), Postives = 121/267 (45.32%), Query Frame = 0 Query: 117 IEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSC-VLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVS 382 +E+ RP NV+ ++ L IGA++ + +P AI + VAVG+ +NDYFDR +DRIN PER + +G + P AL+ + L +G + L+ T L + A L +YTE FK P L N +VA ++ ++ G A + ++ ++ +L+A+ T++ REI+ D++DIAGD G+ TLP +G+ +L L L+ V+ S Sbjct: 11 LELTRPVNVIAASVLTFIGAFVAGG---VTTAPFAVVAAIAATGVAVGAGNAINDYFDREIDRINQPERAIPRGAVSPRGALVFSF-----VLFVGAVGLAIT------------------LPGAAIAIAAINLLALVAYTE----------------------FFKGLPGLGNALVAYLVGSTFLFG------AAAVGNMGPAVVLFVLSAIATLT-----REIIKDVEDIAGDREEGLNTLPIAIGERRALQLAAGLLVVAVLAS 218
BLAST of EWM25596.1 vs. NCBI_GenBank
Match: gi|493159224|ref|WP_006167205.1| (geranylgeranylglycerol-phosphate geranylgeranyltransferase [Natrialba chahannaoensis] >gi|445646921|gb|ELY99902.1| prenyltransferase [Natrialba chahannaoensis JCM 10990]) HSP 1 Score: 80.1073 bits (196), Expect = 4.544e-13 Identity = 77/267 (28.84%), Postives = 118/267 (44.19%), Query Frame = 0 Query: 117 IEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGS-CVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLVAVSTWVS 382 +E+ RP NVL ++ L IGA++ L PL A+ + +AVG+ +NDYFDR +DRIN P+R + +G + P AL+ ++ A+ L A TL + + LL A+V YT FK P L N +VA ++ ++ G A + + ++ LAAV T+S REI+ D++DI GD G+ TLP +G+ SL + L+ V S Sbjct: 11 LELTRPVNVLAASVLTFIGAFVAGG---LGSYPLQTGAAVAATGLAVGAGNAINDYFDREIDRINQPDRAIPRGAVSPRGALVFSIVLFAAAVGL------------------------------------ALTLPLEALAIAGINLL---------ALVAYTEYFKGLPGLGNALVAYLVGSTFLFG------AAAVGEIGPAVVLFALAAVATLS-----REIIKDVEDIEGDREEGLNTLPIAIGERQSLYVATALLVVGVVAS 218 The following BLAST results are available for this feature:
BLAST of EWM25596.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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