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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100096g18.983.mrna |
| Orig protein id | gnl|cribi|Naga_100096g18.983 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1277166..1278462 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna509 ID=rna509|Name=rna509|organism=Nannochloropsis gaditana|type=mRNA|length=2010bp
GCTGGCGACTTATATATGAGTTGTGGCCTTTTATGAGTCTCGGTGGCGCG
TTTCGTGGTCAGGCAGACAAGCCTCTTGAGCAGGGTCCAGTGTGCACGAC
CCTCATGCCTTACTTTGTTCCATGCACTCCGTCGCTCTTCTTTGTCCGTA
CTCAATCACCCAGGCGAATAGTACAGCCGTGTTGCCGCCCTTACTTTTTG
TCCGTCAGGCGCTCGACCGCTCGTCCGTCAGTTGGCCCGGGCTTGCAATT
TCCGTCAAGTTTGTTCTGCTCCCTGTCCTTCAAACGCACTATCAGCAGTC
ATTGTCGGGCACCATCAGCATCCTCCGCACCCAGTAGCAAGTAACATCCT
GAGAAAGCTCTGTCCTCGTCATGCCTGAGACCGTGGCAGAGAAGGTACAG
GACCTGGTAATGGCATGCCTGTTCACCCTAATTGCCGTGGTCGCCTTGGT
GAAATGTCGTAGGGTCATCATTTTGGAGGGCGCAGAGACTGCCATCAAAA
CCTTCTACTTCCTTATTTTTGGCGCCGCTGCCTTACGAGCCGTGTGGTTT
TTCATACCCTCCGACGTCCTGGAGCCTTCCTACGCGCCCGCCGAAGTTTG
GGCCTTCCAAACTCCTCATTGGGCGGGTACGCTGGTGTCGGAAATACTCC
TCTCAGGGGGAACCTTGTGCCTATTCGCCATTTTTGTCTTGATCATCATT
TATTGGGCAGATTTGTTGAAGAAGGTTTTCAAACCGGTGCGAAAACATGA
ACCCATGACGACTTTTCTGAGCATCATGGGTAGCCTCGCTGCCTTTGAAG
TTGCGAATTTCGCGCTGTTTCTGGCCGGCATCTACTCTTCCCAGGTCATG
ACGCTGTTGGACTCGATCATGCTAGCCCTCGTCTCCATGGCGTGCGTGGT
GGAAATCTCCATTTTCTCGCACCGTTTTCGGACGGTGTTGACGACCCTGG
GTGCCATCAACCAAGTGCCCACGGACTCCCAGGTACGGACCATTATCTGG
ATCACCGTCTTCGGGAACGTCTTCTTTGTCCTCCGGGCGATGGTCGAGCT
TTTTCTGGCCGCCACCTTCATTGCCTTGTGGCGCGCCCACAAGCCCCTGA
GCTCCCTGGCCACCCCCCGGAACCACTTTTGGGACGTGTACGTGCTGATC
AAGCACAGCTTGGAGCTGATGATCCTCTTCTTGATGCTGTACACCCTCCA
GTCGCGGAGGACGGCGCACCACCACCACGTGCCCCCGGCCCATCCTGTCT
CGCACCCACAAGGCATAGGAGCTGGAAGCAGTCTGAGGAGTGCGGCAGGG
GGGGGAGGGGGGTCGGGCTCAGGGGCCTCGTATCTGTCGATGGCGTCCAC
GGGGAACAAACCACCAAATCGGAGCGAGTACACCGAGGTGAAAGACTTGG
ATGCGGCGCGTGGGGGAAGGGCTGGGAACGGAGGGCGGGCCCCGGGATTT
TTGTCCTCGGGAGGAGGCCAGGGAAGGCCTTTCGCGGGCGGTGGGATTGT
AAAAACAGCCGTCAGGGGGACTGAGATGGCCTGAGGAAGGGCATGGCTGA
TAGAACCAAAATGCCGAGTTTTTTCCGTGGATGGCATGGGCGCGGGTACA
AGCACTGTAGGGAAAATCATTGCTAGTTTTTACCCTTGATACTAATGCTG
AGATTTAAAGCCGAACGAACGTTGTCGTCACTGAGTCCGTAAGGTCCGGC
GGGGGAGGAGCGTCAAGGCGCCACTGTACAAAAGAAAGCCCCAAAGTACA
CACAACCGGGGCAAGTATGGGTAAAGGCGGGGAGCAACAAGGGTATTTGA
AATAAAGCATTTAAAGGAGAAATGAATTGGAAAGAGAAAGTAAAACAGTT
GTGTTCGCCACCAAGAAATTTGGTGTCCGGCATGGGAGGTCCGTCATCGT
GTTACAGATCAAAGGAAGACCCCATGATCTTTGAGAACGAACAAGCATTG
AATCCGAGCAACTCACTCAGCGTCCATCAGTCAGATCAGAATGTTCTTTA
ACGCTTAATT back to topprotein sequence of rna509 >rna509-protein ID=rna509-protein|Name=rna509|organism=Nannochloropsis gaditana|type=polypeptide|length=257bp
MEQGDEELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEG
TNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDED
EDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQ
TSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTVRLWVYAQGRM
LAHLEGLLTFSPNLVAASGQFDDVDEAEGAASGGGDQGQDGGRGEGGMNG
HGADTTQ back to topmRNA from alignment at CM002455.1:1277166..1278462- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna509 ID=rna509|Name=rna509|organism=Nannochloropsis gaditana|type=mRNA|length=1297bp|location=Sequence derived from alignment at CM002455.1:1277166..1278462- (Nannochloropsis gaditana)
ATGGAGCAGGTGAGAATGGAGGGTTTCAAGGAGCCCTATCCATGGCACGG
ACATCTCACTATTTGCTCACCATCGTTTGCCCCACATATGGTCGTCATGC
AAGTCTCGTACCTAACATGTATCTGCTATAAAACATAGGGGGACGAGGAG
CTCCTTTTTGAGCTAGTTGACGTGGAGATGTCGTACGGAAGCAGTACGGG
GCCCTCTGAAAGGCGAGGCCTTCTACAAATAACTTCCAAACGTTTACGGT
GGAAAGCAAGGCGTGAAGAAGACGAAGGGACAAATTTGACGGCAGATACA
GATCTGGGAGAGGAATTGTATGAAGCAGAAATTCCCTGCATTACTCTCCA
TGCGATCTCGAAGGATCCCTCCTCGTTTCCAAAGCCGTGCTTGTACTGCC
AGGTAGGTTGCGATCTTGTTCGTGATGTATTAAAGGCCGTCCTTGGAAAA
TGAGAATGACATATACAGCTATACATCTGAGTGATCCAATCGATTTAATT
CGCGCCTTCCACCGTCTAGATTTCTGAAGGCGGTGAAGACGAGGACGAGG
ACGCCTCGAAAGAAGTGTATTTTGTTCCAGAGGACCCGGAAAGCTGTGAG
TATTGCTCCCAACCATGCGCTGGAGCGCTGGAGTAGTTATCGATCGTTTC
TTAATCATGCTTGAGTCGCGTATCTGCCACGCGAACTAGAGGGGACGAAT
GAATAGGCGCCGATCGCCGACCACATGGGGTGGTTGTATCTCTTCCATGT
ACTTTCCTTCCCTGTTCCTGAACTGTCGCGCATCTTCACTTCTCCCTTAT
CTCTGCAGTGGGCCCCCTTTTCGAAGCATTATCTCGGGCCGCCCTTATGA
ATCCCGATCCCCCTGAGGCCGGTGAGAATGAAGGGGATGATGAGTTGATC
TTTGATCAAACCTCCACTGACGGCGCGAGTGGAGCCAGCGAGGAGCAGGT
AGGGATATGGTTGAGGAAGTGTGTATGAGTGTCCCTCTACTGCGCAAACG
AACGATACAAAGTACGAGGCCATCAAGGAAATGTGCAGGCTGTGTGGCTT
CTCGCATGGGCAGCATCGATGTATTGACTTGTCTTCTACCGTACGTCTAT
GGGTTTACGCTCAGGGCCGCATGCTGGCCCATCTTGAAGGCCTCCTGACC
TTTTCTCCAAATCTGGTAGCAGCCAGCGGCCAATTTGACGATGTCGACGA
GGCGGAAGGTGCGGCATCAGGTGGAGGGGACCAGGGGCAAGATGGAGGGC
GGGGAGAGGGAGGGATGAATGGGCATGGCGCAGACACGACTCAATAA back to topCoding sequence (CDS) from alignment at CM002455.1:1277166..1278462- >rna509 ID=rna509|Name=rna509|organism=Nannochloropsis gaditana|type=CDS|length=3870bp|location=Sequence derived from alignment at CM002455.1:1277166..1278462- (Nannochloropsis gaditana)
TACGAGGCCATCAAGGAAATGTGCAGGCTGTGTGGCTTCTCGCATGGGCA
GCATCGATGTATTGACTTGTCTTCTACCGTACGTCTATGGGTTTACGCTC
AGGGCCGCATGCTGGCCCATCTTGAAGGCCTCCTGACCTTTTCTCCAAAT
CTGGTAGCAGCCAGCGGCCAATTTGACGATGTCGACGAGGCGGAAGGTGC
GGCATCAGGTGGAGGGGACCAGGGGCAAGATGGAGGGCGGGGAGAGGGAG
GGATGAATGGGCATGGCGCAGACACGACTCAATAATGGGCCCCCTTTTCG
AAGCATTATCTCGGGCCGCCCTTATGAATCCCGATCCCCCTGAGGCCGGT
GAGAATGAAGGGGATGATGAGTTGATCTTTGATCAAACCTCCACTGACGG
CGCGAGTGGAGCCAGCGAGGAGCAGATTTCTGAAGGCGGTGAAGACGAGG
ACGAGGACGCCTCGAAAGAAGTGTATTTTGTTCCAGAGGACCCGGAAAGC
TGGGGACGAGGAGCTCCTTTTTGAGCTAGTTGACGTGGAGATGTCGTACG
GAAGCAGTACGGGGCCCTCTGAAAGGCGAGGCCTTCTACAAATAACTTCC
AAACGTTTACGGTGGAAAGCAAGGCGTGAAGAAGACGAAGGGACAAATTT
GACGGCAGATACAGATCTGGGAGAGGAATTGTATGAAGCAGAAATTCCCT
GCATTACTCTCCATGCGATCTCGAAGGATCCCTCCTCGTTTCCAAAGCCG
TGCTTGTACTGCCAGATGGAGCAGTACGAGGCCATCAAGGAAATGTGCAG
GCTGTGTGGCTTCTCGCATGGGCAGCATCGATGTATTGACTTGTCTTCTA
CCGTACGTCTATGGGTTTACGCTCAGGGCCGCATGCTGGCCCATCTTGAA
GGCCTCCTGACCTTTTCTCCAAATCTGGTAGCAGCCAGCGGCCAATTTGA
CGATGTCGACGAGGCGGAAGGTGCGGCATCAGGTGGAGGGGACCAGGGGC
AAGATGGAGGGCGGGGAGAGGGAGGGATGAATGGGCATGGCGCAGACACG
ACTCAATAATGGGCCCCCTTTTCGAAGCATTATCTCGGGCCGCCCTTATG
AATCCCGATCCCCCTGAGGCCGGTGAGAATGAAGGGGATGATGAGTTGAT
CTTTGATCAAACCTCCACTGACGGCGCGAGTGGAGCCAGCGAGGAGCAGA
TTTCTGAAGGCGGTGAAGACGAGGACGAGGACGCCTCGAAAGAAGTGTAT
TTTGTTCCAGAGGACCCGGAAAGCTGGGGACGAGGAGCTCCTTTTTGAGC
TAGTTGACGTGGAGATGTCGTACGGAAGCAGTACGGGGCCCTCTGAAAGG
CGAGGCCTTCTACAAATAACTTCCAAACGTTTACGGTGGAAAGCAAGGCG
TGAAGAAGACGAAGGGACAAATTTGACGGCAGATACAGATCTGGGAGAGG
AATTGTATGAAGCAGAAATTCCCTGCATTACTCTCCATGCGATCTCGAAG
GATCCCTCCTCGTTTCCAAAGCCGTGCTTGTACTGCCAGATGGAGCAGTA
CGAGGCCATCAAGGAAATGTGCAGGCTGTGTGGCTTCTCGCATGGGCAGC
ATCGATGTATTGACTTGTCTTCTACCGTACGTCTATGGGTTTACGCTCAG
GGCCGCATGCTGGCCCATCTTGAAGGCCTCCTGACCTTTTCTCCAAATCT
GGTAGCAGCCAGCGGCCAATTTGACGATGTCGACGAGGCGGAAGGTGCGG
CATCAGGTGGAGGGGACCAGGGGCAAGATGGAGGGCGGGGAGAGGGAGGG
ATGAATGGGCATGGCGCAGACACGACTCAATAATGGGCCCCCTTTTCGAA
GCATTATCTCGGGCCGCCCTTATGAATCCCGATCCCCCTGAGGCCGGTGA
GAATGAAGGGGATGATGAGTTGATCTTTGATCAAACCTCCACTGACGGCG
CGAGTGGAGCCAGCGAGGAGCAGATTTCTGAAGGCGGTGAAGACGAGGAC
GAGGACGCCTCGAAAGAAGTGTATTTTGTTCCAGAGGACCCGGAAAGCTG
GGGACGAGGAGCTCCTTTTTGAGCTAGTTGACGTGGAGATGTCGTACGGA
AGCAGTACGGGGCCCTCTGAAAGGCGAGGCCTTCTACAAATAACTTCCAA
ACGTTTACGGTGGAAAGCAAGGCGTGAAGAAGACGAAGGGACAAATTTGA
CGGCAGATACAGATCTGGGAGAGGAATTGTATGAAGCAGAAATTCCCTGC
ATTACTCTCCATGCGATCTCGAAGGATCCCTCCTCGTTTCCAAAGCCGTG
CTTGTACTGCCAGATGGAGCAGTACGAGGCCATCAAGGAAATGTGCAGGC
TGTGTGGCTTCTCGCATGGGCAGCATCGATGTATTGACTTGTCTTCTACC
GTACGTCTATGGGTTTACGCTCAGGGCCGCATGCTGGCCCATCTTGAAGG
CCTCCTGACCTTTTCTCCAAATCTGGTAGCAGCCAGCGGCCAATTTGACG
ATGTCGACGAGGCGGAAGGTGCGGCATCAGGTGGAGGGGACCAGGGGCAA
GATGGAGGGCGGGGAGAGGGAGGGATGAATGGGCATGGCGCAGACACGAC
TCAATAATGGGCCCCCTTTTCGAAGCATTATCTCGGGCCGCCCTTATGAA
TCCCGATCCCCCTGAGGCCGGTGAGAATGAAGGGGATGATGAGTTGATCT
TTGATCAAACCTCCACTGACGGCGCGAGTGGAGCCAGCGAGGAGCAGATT
TCTGAAGGCGGTGAAGACGAGGACGAGGACGCCTCGAAAGAAGTGTATTT
TGTTCCAGAGGACCCGGAAAGCTGGGGACGAGGAGCTCCTTTTTGAGCTA
GTTGACGTGGAGATGTCGTACGGAAGCAGTACGGGGCCCTCTGAAAGGCG
AGGCCTTCTACAAATAACTTCCAAACGTTTACGGTGGAAAGCAAGGCGTG
AAGAAGACGAAGGGACAAATTTGACGGCAGATACAGATCTGGGAGAGGAA
TTGTATGAAGCAGAAATTCCCTGCATTACTCTCCATGCGATCTCGAAGGA
TCCCTCCTCGTTTCCAAAGCCGTGCTTGTACTGCCAGATGGAGCAGTACG
AGGCCATCAAGGAAATGTGCAGGCTGTGTGGCTTCTCGCATGGGCAGCAT
CGATGTATTGACTTGTCTTCTACCGTACGTCTATGGGTTTACGCTCAGGG
CCGCATGCTGGCCCATCTTGAAGGCCTCCTGACCTTTTCTCCAAATCTGG
TAGCAGCCAGCGGCCAATTTGACGATGTCGACGAGGCGGAAGGTGCGGCA
TCAGGTGGAGGGGACCAGGGGCAAGATGGAGGGCGGGGAGAGGGAGGGAT
GAATGGGCATGGCGCAGACACGACTCAATAATGGGCCCCCTTTTCGAAGC
ATTATCTCGGGCCGCCCTTATGAATCCCGATCCCCCTGAGGCCGGTGAGA
ATGAAGGGGATGATGAGTTGATCTTTGATCAAACCTCCACTGACGGCGCG
AGTGGAGCCAGCGAGGAGCAGATTTCTGAAGGCGGTGAAGACGAGGACGA
GGACGCCTCGAAAGAAGTGTATTTTGTTCCAGAGGACCCGGAAAGCTGGG
GACGAGGAGCTCCTTTTTGAGCTAGTTGACGTGGAGATGTCGTACGGAAG
CAGTACGGGGCCCTCTGAAAGGCGAGGCCTTCTACAAATAACTTCCAAAC
GTTTACGGTGGAAAGCAAGGCGTGAAGAAGACGAAGGGACAAATTTGACG
GCAGATACAGATCTGGGAGAGGAATTGTATGAAGCAGAAATTCCCTGCAT
TACTCTCCATGCGATCTCGAAGGATCCCTCCTCGTTTCCAAAGCCGTGCT
TGTACTGCCAGATGGAGCAG back to top
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