EWM30175.1, cds509 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|585112832|gb|EWM30175.1| (hypothetical protein Naga_100096g18 [Nannochloropsis gaditana]) HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
Query: 1 MEQGDEELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTVRLWVYAQGRMLAHLEGLLTFSPNLVAASGQFDDVDEAEGAASGGGDQGQDGGRGEGGMNGHGADTTQ 257
MEQGDEELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTVRLWVYAQGRMLAHLEGLLTFSPNLVAASGQFDDVDEAEGAASGGGDQGQDGGRGEGGMNGHGADTTQ
Sbjct: 1 MEQGDEELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTVRLWVYAQGRMLAHLEGLLTFSPNLVAASGQFDDVDEAEGAASGGGDQGQDGGRGEGGMNGHGADTTQ 257
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|298713623|emb|CBJ33675.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 88.9669 bits (219), Expect = 8.370e-18 Identity = 75/249 (30.12%), Postives = 110/249 (44.18%), Query Frame = 0
Query: 6 EELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPE--SLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTVRLWVYAQGRMLAHLEGLLTFSPNLVAASGQFDDVDEAEGAASGGGDQGQDGGRGEGGMNGHG 252
EE+L +V +++ + E G L +T+ R+ W + ++ + ++ ++ I LHAISKDP +FP PC+YCQ++ E+ED KE +F P D E +L LFEA S+AA +NP+P G GA + E + F HG + Q R+LAHL+ +L + A +GQFDD D G GD G G NGH
Sbjct: 30 EEVLLRNEEVTLAFSPES--PEGLGSLTVTTTRVVWLSSEDQSKA-------------FDFDVAYICLHAISKDPGTFPNPCIYCQLAV----EEEDVLKEAFFAPSDGEAATLQALFEAFSKAAELNPEP--------------------GDEGAGAGEEEGLGGGAGGLVFDHGSALSAE-----------QERVLAHLDSVLVVPEGMEAVNGQFDDADVP--PEDGEGDLANGHG---AGANGHA 223
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|325187437|emb|CCA21975.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 88.5817 bits (218), Expect = 9.135e-18 Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 0
Query: 14 DVEMSYG-SSTGPSE----RRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDD-ELIFDQTSTDGASGASE 161
DVE+S S+ P + +G + +T++R W +N ++DT G Y +I CITLHAIS+DP++FP PCLYCQI E EDA+ EV FVP E L L+ A S++A MNPD + E G++ I+D+ + A+E
Sbjct: 38 DVELSINLFSSKPVDESVLNKGKVYVTTRRAIWI--------SNTSSDTSRG---YSWDIKCITLHAISRDPAAFPVPCLYCQI------EAEDAT-EVRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPEGAGEEGNWIYDEDEIRQDAQAAE 173
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|635365521|emb|CCI46131.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 85.1149 bits (209), Expect = 2.171e-16 Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 0
Query: 30 GLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNP---DPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEM 170
G + +TS+R W A N + D G Y +I CITLHAIS+DP++FP PCLYCQI E E+A+ E+ FVP E L L+ A S++A MNP D PE EGD D+ D + Y++I E+
Sbjct: 59 GKVYVTSRRAVWIA--------NTSTDAFRG---YSWDIKCITLHAISRDPTAFPVPCLYCQI------EAENAT-EMRFVPSQSEDLTRLYLAFSKSAEMNPDEEDVPEGAGEEGDWIYDEDEILQDAQAAEMAAHYDSILEV 184
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|953486006|emb|CEG50184.1| (chloride conductance regulatory protein icln-like [Plasmopara halstedii]) HSP 1 Score: 81.6481 bits (200), Expect = 3.290e-15 Identity = 48/109 (44.04%), Postives = 59/109 (54.13%), Query Frame = 0
Query: 24 GPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNP 132
PS G L +T+ R+ W + T +G Y E+ ITLHAIS+DP +FPKPCLYCQIS ED EV FVP D L LF+A S++A MNP
Sbjct: 54 APSGLVGTLFVTTSRVIWLGDAMK---------THVG---YAWEMNTITLHAISRDPLAFPKPCLYCQISI------EDVLSEVRFVPTDDNILQELFKAFSKSAEMNP 144
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|224120234|ref|XP_002318279.1| (nucleotide-sensitive chloride conductance regulator family protein [Populus trichocarpa] >gi|222858952|gb|EEE96499.1| nucleotide-sensitive chloride conductance regulator family protein [Populus trichocarpa]) HSP 1 Score: 81.6481 bits (200), Expect = 4.740e-15 Identity = 65/195 (33.33%), Postives = 92/195 (47.18%), Query Frame = 0
Query: 10 FELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDE------------DASK--EVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTV 190
F L+ E+S G E G L I++K++ W +D D G + Y + I+LHA+S+DP ++P PC+Y QI E GEDEDE D SK E+ VP DP L LF+ A +NP+P E E E + DQ S D + + ++ + G S+G H DL+ TV
Sbjct: 29 FMLMCREVSIVIGNGSPESPGTLYISTKKVVW------------LSDVD-GTKGYAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEEHNWIFSADQLS-DETAEVEDSEWNFSQNPTSSIGHSNGDH---DLARTV 205
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|743856664|ref|XP_011029973.1| (PREDICTED: chloride conductance regulatory protein ICln-like [Populus euphratica]) HSP 1 Score: 81.2629 bits (199), Expect = 7.584e-15 Identity = 63/199 (31.66%), Postives = 93/199 (46.73%), Query Frame = 0
Query: 6 EELLFELVDVEMSYGSSTGPSERRGLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDE------------DASK--EVYFVPEDPESLGPLFEALSRAALMNPDPPEAGENEGDDELIFDQTSTDGASGASEEQYEAIKEMCRLCGFSHGQHRCIDLSSTV 190
EEL+ +V + G+ G E G L I++K++ W + + +G Y + I+LHA+S+DP ++P PC+Y QI E GEDEDE D SK E+ VP DP L LF+ A +NP+P E E E + DQ + D + + ++ + G S+G H DL TV
Sbjct: 27 EELMLMFREVSIVIGN--GSPESPGTLYISTKKVLWLSDVDRTKG-------------YAVDFLSISLHAVSRDPEAYPSPCIYTQI-ETGEDEDESEGSDSECSDALDLSKVTEMRLVPSDPSQLDTLFQVFCECAELNPEPVEDNEEEHNWIFSADQLA-DETAEVEDSEWNFSQNPTSSIGHSNGDH---DLVRTV 205
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|970645224|gb|KUF85755.1| (Chloride conductance regulatory protein ICln [Phytophthora nicotianae] >gi|970653914|gb|KUF92308.1| Chloride conductance regulatory protein ICln [Phytophthora nicotianae]) HSP 1 Score: 80.4925 bits (197), Expect = 9.296e-15 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 0
Query: 30 GLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNP 132
G L +T+ R+ W T +G Y E+ +TLHAIS+DP++FPKPCLYCQIS ++D S EV FVP D ++L +F+A S++A MNP
Sbjct: 62 GALFVTTSRVIWLGA---------AVSTHVG---YAWEMSSVTLHAISRDPAAFPKPCLYCQIS------NQDVS-EVRFVPTDDKTLQEVFDAFSKSAEMNP 145
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|675175853|ref|XP_008896811.1| (hypothetical protein PPTG_05081 [Phytophthora parasitica INRA-310] >gi|566011644|gb|ETI34555.1| hypothetical protein F443_18960 [Phytophthora parasitica P1569] >gi|567949174|gb|ETK74906.1| hypothetical protein L915_18386 [Phytophthora parasitica] >gi|567977834|gb|ETL28330.1| hypothetical protein L916_18289 [Phytophthora parasitica] >gi|568007340|gb|ETL81579.1| hypothetical protein L917_18109 [Phytophthora parasitica] >gi|568037194|gb|ETM34784.1| hypothetical protein L914_18195 [Phytophthora parasitica] >gi|568102558|gb|ETN17229.1| hypothetical protein PPTG_05081 [Phytophthora parasitica INRA-310] >gi|570315408|gb|ETO63356.1| hypothetical protein F444_18913 [Phytophthora parasitica P1976] >gi|570939192|gb|ETP04449.1| hypothetical protein F441_18771 [Phytophthora parasitica CJ01A1] >gi|570969461|gb|ETP32580.1| hypothetical protein F442_18741 [Phytophthora parasitica P10297]) HSP 1 Score: 79.7221 bits (195), Expect = 1.522e-14 Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 30 GLLQITSKRLRWKARREEDEGTNLTADTDLGEELYEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNP 132
G L +T+ R+ W GT++ Y E+ +TLHAIS+DP++FPKPCLYCQIS ++D S EV FVP D ++L +F+A S++A MNP
Sbjct: 62 GALFVTTSRVIWLGAAV---GTHVG---------YAWEMSSVTLHAISRDPAAFPKPCLYCQIS------NQDVS-EVRFVPTDDKTLQEVFDAFSKSAEMNP 145
BLAST of EWM30175.1 vs. NCBI_GenBank
Match: gi|301119097|ref|XP_002907276.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105788|gb|EEY63840.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 78.5666 bits (192), Expect = 4.246e-14 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 0
Query: 30 GLLQITSKRLRWKARREEDEGTNLTADTDLGEEL-YEAEIPCITLHAISKDPSSFPKPCLYCQISEGGEDEDEDASKEVYFVPEDPESLGPLFEALSRAALMNP 132
G L +T+ R+ W +G +L Y E+ +TLHAIS+DP++F KPCLYCQIS ++D S E+ FVP D ++L LF+A S++A MNP
Sbjct: 62 GALFVTTSRVLWLGAA-------------MGTQLGYAWEMSSVTLHAISRDPAAFSKPCLYCQIS------NQDVS-EIRFVPVDDKTLQELFDAFSKSAEMNP 145 The following BLAST results are available for this feature:
BLAST of EWM30175.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|