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Properties
| Property Name | Value |
| Product | set domain containing protein |
| Orig transcript id | gnl|cribi|Naga_101047g2.5281.mrna |
| Orig protein id | gnl|cribi|Naga_101047g2.5281 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002465.1 | supercontig | CM002465.1:53600..56189 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5078 ID=rna5078|Name=rna5078|organism=Nannochloropsis gaditana|type=mRNA|length=547bp CCCCTTCCCCTCTCCCACCCCACATCCTAGGCACTGGGGACGTCACTGGC CGCCATGGTCCCTACGGCCCTGGTTGGCACTCACTCGCACCATGCACAAG GGCATGTGGTCTGGTCGTTTGTGGCTCCGCTGGCTGTGGGCTCTCTGTGC GGGAGCTTCTTGGGGGGGAAAGAGATCGCAATGCAGATTCCTGAAAATTA CTTGAAGTGGGGCTTTGGGATTATGATGGTCGTGCTAGGGAGCAAAACCA TTTATTCTGCTGGACCGTTGAAAAGCATGGCCCTATCGGCATCAAAGGCC AAGTGAAGCAGATGAGGGAAAACCTATATAAAAGAGGAGGGATTTAATGG GAGAAAAGAAGGAGAATGGGGATTACAGTGGAAAATGTGCATAACTTTTA AATTGGATGAATTGAAATGTATGTAAGGGATTAAAGAGTTAGATGTCGAA ATCGATTATTAAAGGGAAAAATTGTTGGTGCAAGGTCAGGGGGTAAGGAG GTTAACTGGCACACCAAAAGCAAACAAATAGCAACGCGTACTTGTTT back to topprotein sequence of rna5078 >rna5078-protein ID=rna5078-protein|Name=rna5078|organism=Nannochloropsis gaditana|type=polypeptide|length=297bp MQLDAGVSSSGGTADESAVNKYDRFLKWLLDNGAHFPLLELREYESDVRG VHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIF LMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQ IEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRI RTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYG QKCNHRFLLNYGFAVENNREADNFCPNEVGLWQERARKGERERGTMG back to topmRNA from alignment at CM002465.1:53600..56189+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5078 ID=rna5078|Name=rna5078|organism=Nannochloropsis gaditana|type=mRNA|length=2590bp|location=Sequence derived from alignment at CM002465.1:53600..56189+ (Nannochloropsis gaditana) ACATTGTGTCAACATGCTGGTTTCATTTCCACAGCTTTTGCAGTCATCGA
TCTTGTCCACAACGATAATTTTCCAGGCAGGGCGGTGGCTCGGAGGGGAG
GCATACTGCTTCACTTTTGGCTGTTTTGGCATTAAATTTGTCCTGCCATT
TCTACATCATCCTTGATACGGCTGCTACATTAAGAAATTAAGTAGAGGTG
TACAACGCCGTAGACGAAGCATGCAACTGGATGCGGGAGTGAGCAGCAGT
GGAGGTATGGCGGGGGtgcaagggggagggtggataAGCGGCAAAAGGGG
CTAGAAATACCGAAAAAACGATGACTGAACCCACTGGATTTTTCTAGTCT
CCTACGGTCATATCTAGATACTAGATGGCTAGAGGCGCAAAATTTCAGGC
TGACGCCTTACTTTCATCGAATGCTTGCAACCCGCTCGCCACACAGGTAC
CGCAGACGAGTCCGCTGTCAACAAATACGACCGGTTCTTAAAATGGCTTT
TGGACAACGGCGCACACTTTCCTCTACTAGAATTGAGGGTATGGAAATTT
GTAGACAGAGTTTGGGCAGGACAATATATCAGGGGGATCTCGTTTCAATA
TCTACATGCTACgagccctccttcgcttaCCGATGTTTTCATGCCGCTTT
TAGTCCCCCCACCTTGTCGGCCTTTGCGTGCTAAGAACACTTCTTTGTTT
GTATCATTTAGATTTGAAAGCTTGTCCCTCATttctgcttcctcgcccct
ccccttgattCCTTTTGTCCCGTGGCTCTAAGCCTCgattcccctcttcc
ccccctcatcTATACACCCACATCATCCGattccatctccttcccacctc
ctcttgcaCCTCTTTGTATCCTCATTTTCTCAGGAGTACGAATCCGACGT
CCGCGGGGTGCACgcgaaggaggcgctggcaggCGatcaggtgagggagg
gagggagagaggaagggaaggagggagagaagggagggagtcccTTTCTT
ATAAGCAAGCGAGGCGATAAACAGACGCTTGCTCAGAGTGGCAAGccatt
tcccttcctcaggtggtggtggaaatTCCCCTCCGGTGCCTGATCACGGt
ggagatggggaaggagtcCGACGTGGGAAAAGCGGTGCTCGCGTCCAATT
TGCCCCTGGACGCACCCAAGCACATCTTCTTGATGCTCTTCATGCTCACG
GACAGGCGgaacccgtcctccttctttaaGGTGCGccggtgtttctcgta
ccgCTCTCCTTCGGTGCCCCTCGAGCCAGTAGTCTGCTCAGATCACGGGG
CTCCgttgccctctctccacaTGGCTCTATGTCGCTCTGCCCTGCCGAAG
CCCCTTTATATCTCTCGCACGGGTCCACCCTTCTCACTGCTAAGCCTtcg
atgcctccctcttacctttccttctcctgtaTTTCCCCTGATAGCCCTAC
TACGatatccttccctcctccttgtcgaaCATGCCGATCTTCTGGACGGA
TGAGGAACTGGCTTACCTgaaaggtgaaggaggaaggaagaaggaagcaa
gggaggagtggaCGGGAAAAATTGGAAATAGAAGGGATTgggcaggagaa
gatgagaaaTCGATCAGAGGAACACCTTGCCTCCTTTCGTCTCACGTTCT
ATCCTGAATCCTTGACTCATTGCAAACACTCTCTCACccattctctccct
ctccctccttccctccctccttccccctcctccttccctcccttcgccag
GCTCCCACCTCCTGACCCAGATCGAGGAACGGAAGCGTGCCATTGAAGCC
GACTACGCGGCCATCGCCGACGtggctccctctctcccctccatctGCTC
AGTGGAGGAGTTCAAGTGGGCCCGTATGTGCGTCTgttcgcgcaattttg
gTCTGGAGGTGAACAGAATCAGGACGGCGGCCTTGGTCCCCTACGCAGgt
agccctccccccctcctttccttggtCGCCTCCTTTTTTCGTCCCCTTCC
GAAGGCTTGGGAAGAGTGTTTAAATCTTTTAAGGATCCTTATGTACTATG
GATTACACTACCTTTCTAACCCCCCACGTTCCCTTCGCCTTGCCAGATAT
GCTCAACCACCAGCGGCCCCGCGAAACCAAGTGGACCTTCGACAACGCTC
GTCAGGCTTTTACTATCACGACGCTCCAGCCCATCGCCCCCGGGGCCCAG
GTGCCtcaccttgccctccctccaccgcaccctgctccgcttcttcccac
cctcctttcccgcgtCGACGCACTATCACATCGGCCATGTCTTATGCGCC
GCATCACCTACCAGGGATACTCAGACGCTTGCACgcaattttcttcctcc
ctttctcactCTTATTGCACCTTAGGTCTATGATTCATACGGCCAGAAGT
GTAAccaccgcttccttctcAACTACGGTTTCGCCGTGGAAAATAACAGA
GAAGCAGATAATTTCTGTCCAAACGAGGTCGGGTTGTGgcaggagagagc
gaggaagggggagagggaaagaggtaCAATGGGATGATTCCCGCACGAAA
ATTGTAGCACTTAAAAGAATTGTTctccctaccctcctcc back to topCoding sequence (CDS) from alignment at CM002465.1:53600..56189+ >rna5078 ID=rna5078|Name=rna5078|organism=Nannochloropsis gaditana|type=CDS|length=7152bp|location=Sequence derived from alignment at CM002465.1:53600..56189+ (Nannochloropsis gaditana) ATGCAACTGGATGCGGGAGTGAGCAGCAGTGGAGGTACCGCAGACGAGTC CGCTGTCAACAAATACGACCGGTTCTTAAAATGGCTTTTGGACAACGGCG CACACTTTCCTCTACTAGAATTGAGGGAGTACGAATCCGACGTCCGCGGG GTGCACgcgaaggaggcgctggcaggCGatcaggtggtggtggaaatTCC CCTCCGGTGCCTGATCACGGtggagatggggaaggagtcCGACGTGGGAA AAGCGGTGCTCGCGTCCAATTTGCCCCTGGACGCACCCAAGCACATCTTC TTGATGCTCTTCATGCTCACGGACAGGCGgaacccgtcctccttctttaa GCCCTACTACGatatccttccctcctccttgtcgaaCATGCCGATCTTCT GGACGGATGAGGAACTGGCTTACCTgaaagGCTCCCACCTCCTGACCCAG ATCGAGGAACGGAAGCGTGCCATTGAAGCCGACTACGCGGCCATCGCCGA CGtggctccctctctcccctccatctGCTCAGTGGAGGAGTTCAAGTGGG CCCGTATGTGCGTCTgttcgcgcaattttggTCTGGAGGTGAACAGAATC AGGACGGCGGCCTTGGTCCCCTACGCAGATATGCTCAACCACCAGCGGCC CCGCGAAACCAAGTGGACCTTCGACAACGCTCGTCAGGCTTTTACTATCA CGACGCTCCAGCCCATCGCCCCCGGGGCCCAGGTCTATGATTCATACGGC CAGAAGTGTAAccaccgcttccttctcAACTACGGTTTCGCCGTGGAAAA TAACAGAGAAGCAGATAATTTCTGTCCAAACGAGGTCGGGTTGTGgcagg agagagcgaggaagggggagagggaaagaggtaCAATGGGATGAATGCAA CTGGATGCGGGAGTGAGCAGCAGTGGAGGTACCGCAGACGAGTCCGCTGT CAACAAATACGACCGGTTCTTAAAATGGCTTTTGGACAACGGCGCACACT TTCCTCTACTAGAATTGAGGGAGTACGAATCCGACGTCCGCGGGGTGCAC gcgaaggaggcgctggcaggCGatcaggtggtggtggaaatTCCCCTCCG GTGCCTGATCACGGtggagatggggaaggagtcCGACGTGGGAAAAGCGG TGCTCGCGTCCAATTTGCCCCTGGACGCACCCAAGCACATCTTCTTGATG CTCTTCATGCTCACGGACAGGCGgaacccgtcctccttctttaaGCCCTA CTACGatatccttccctcctccttgtcgaaCATGCCGATCTTCTGGACGG ATGAGGAACTGGCTTACCTgaaagGCTCCCACCTCCTGACCCAGATCGAG GAACGGAAGCGTGCCATTGAAGCCGACTACGCGGCCATCGCCGACGtggc tccctctctcccctccatctGCTCAGTGGAGGAGTTCAAGTGGGCCCGTA TGTGCGTCTgttcgcgcaattttggTCTGGAGGTGAACAGAATCAGGACG GCGGCCTTGGTCCCCTACGCAGATATGCTCAACCACCAGCGGCCCCGCGA AACCAAGTGGACCTTCGACAACGCTCGTCAGGCTTTTACTATCACGACGC TCCAGCCCATCGCCCCCGGGGCCCAGGTCTATGATTCATACGGCCAGAAG TGTAAccaccgcttccttctcAACTACGGTTTCGCCGTGGAAAATAACAG AGAAGCAGATAATTTCTGTCCAAACGAGGTCGGGTTGTGgcaggagagag cgaggaagggggagagggaaagaggtaCAATGGGATGAATGCAACTGGAT GCGGGAGTGAGCAGCAGTGGAGGTACCGCAGACGAGTCCGCTGTCAACAA ATACGACCGGTTCTTAAAATGGCTTTTGGACAACGGCGCACACTTTCCTC TACTAGAATTGAGGGAGTACGAATCCGACGTCCGCGGGGTGCACgcgaag gaggcgctggcaggCGatcaggtggtggtggaaatTCCCCTCCGGTGCCT GATCACGGtggagatggggaaggagtcCGACGTGGGAAAAGCGGTGCTCG CGTCCAATTTGCCCCTGGACGCACCCAAGCACATCTTCTTGATGCTCTTC ATGCTCACGGACAGGCGgaacccgtcctccttctttaaGCCCTACTACGa tatccttccctcctccttgtcgaaCATGCCGATCTTCTGGACGGATGAGG AACTGGCTTACCTgaaagGCTCCCACCTCCTGACCCAGATCGAGGAACGG AAGCGTGCCATTGAAGCCGACTACGCGGCCATCGCCGACGtggctccctc tctcccctccatctGCTCAGTGGAGGAGTTCAAGTGGGCCCGTATGTGCG TCTgttcgcgcaattttggTCTGGAGGTGAACAGAATCAGGACGGCGGCC TTGGTCCCCTACGCAGATATGCTCAACCACCAGCGGCCCCGCGAAACCAA GTGGACCTTCGACAACGCTCGTCAGGCTTTTACTATCACGACGCTCCAGC CCATCGCCCCCGGGGCCCAGGTCTATGATTCATACGGCCAGAAGTGTAAc caccgcttccttctcAACTACGGTTTCGCCGTGGAAAATAACAGAGAAGC AGATAATTTCTGTCCAAACGAGGTCGGGTTGTGgcaggagagagcgagga agggggagagggaaagaggtaCAATGGGATGAATGCAACTGGATGCGGGA GTGAGCAGCAGTGGAGGTACCGCAGACGAGTCCGCTGTCAACAAATACGA CCGGTTCTTAAAATGGCTTTTGGACAACGGCGCACACTTTCCTCTACTAG AATTGAGGGAGTACGAATCCGACGTCCGCGGGGTGCACgcgaaggaggcg ctggcaggCGatcaggtggtggtggaaatTCCCCTCCGGTGCCTGATCAC GGtggagatggggaaggagtcCGACGTGGGAAAAGCGGTGCTCGCGTCCA ATTTGCCCCTGGACGCACCCAAGCACATCTTCTTGATGCTCTTCATGCTC ACGGACAGGCGgaacccgtcctccttctttaaGCCCTACTACGatatcct tccctcctccttgtcgaaCATGCCGATCTTCTGGACGGATGAGGAACTGG CTTACCTgaaagGCTCCCACCTCCTGACCCAGATCGAGGAACGGAAGCGT GCCATTGAAGCCGACTACGCGGCCATCGCCGACGtggctccctctctccc ctccatctGCTCAGTGGAGGAGTTCAAGTGGGCCCGTATGTGCGTCTgtt cgcgcaattttggTCTGGAGGTGAACAGAATCAGGACGGCGGCCTTGGTC CCCTACGCAGATATGCTCAACCACCAGCGGCCCCGCGAAACCAAGTGGAC CTTCGACAACGCTCGTCAGGCTTTTACTATCACGACGCTCCAGCCCATCG CCCCCGGGGCCCAGGTCTATGATTCATACGGCCAGAAGTGTAAccaccgc ttccttctcAACTACGGTTTCGCCGTGGAAAATAACAGAGAAGCAGATAA TTTCTGTCCAAACGAGGTCGGGTTGTGgcaggagagagcgaggaaggggg agagggaaagaggtaCAATGGGATGAATGCAACTGGATGCGGGAGTGAGC AGCAGTGGAGGTACCGCAGACGAGTCCGCTGTCAACAAATACGACCGGTT CTTAAAATGGCTTTTGGACAACGGCGCACACTTTCCTCTACTAGAATTGA GGGAGTACGAATCCGACGTCCGCGGGGTGCACgcgaaggaggcgctggca ggCGatcaggtggtggtggaaatTCCCCTCCGGTGCCTGATCACGGtgga gatggggaaggagtcCGACGTGGGAAAAGCGGTGCTCGCGTCCAATTTGC CCCTGGACGCACCCAAGCACATCTTCTTGATGCTCTTCATGCTCACGGAC AGGCGgaacccgtcctccttctttaaGCCCTACTACGatatccttccctc ctccttgtcgaaCATGCCGATCTTCTGGACGGATGAGGAACTGGCTTACC TgaaagGCTCCCACCTCCTGACCCAGATCGAGGAACGGAAGCGTGCCATT GAAGCCGACTACGCGGCCATCGCCGACGtggctccctctctcccctccat ctGCTCAGTGGAGGAGTTCAAGTGGGCCCGTATGTGCGTCTgttcgcgca attttggTCTGGAGGTGAACAGAATCAGGACGGCGGCCTTGGTCCCCTAC GCAGATATGCTCAACCACCAGCGGCCCCGCGAAACCAAGTGGACCTTCGA CAACGCTCGTCAGGCTTTTACTATCACGACGCTCCAGCCCATCGCCCCCG GGGCCCAGGTCTATGATTCATACGGCCAGAAGTGTAAccaccgcttcctt ctcAACTACGGTTTCGCCGTGGAAAATAACAGAGAAGCAGATAATTTCTG TCCAAACGAGGTCGGGTTGTGgcaggagagagcgaggaagggggagaggg aaagaggtaCAATGGGATGAATGCAACTGGATGCGGGAGTGAGCAGCAGT GGAGGTACCGCAGACGAGTCCGCTGTCAACAAATACGACCGGTTCTTAAA ATGGCTTTTGGACAACGGCGCACACTTTCCTCTACTAGAATTGAGGGAGT ACGAATCCGACGTCCGCGGGGTGCACgcgaaggaggcgctggcaggCGat caggtggtggtggaaatTCCCCTCCGGTGCCTGATCACGGtggagatggg gaaggagtcCGACGTGGGAAAAGCGGTGCTCGCGTCCAATTTGCCCCTGG ACGCACCCAAGCACATCTTCTTGATGCTCTTCATGCTCACGGACAGGCGg aacccgtcctccttctttaaGCCCTACTACGatatccttccctcctcctt gtcgaaCATGCCGATCTTCTGGACGGATGAGGAACTGGCTTACCTgaaag GCTCCCACCTCCTGACCCAGATCGAGGAACGGAAGCGTGCCATTGAAGCC GACTACGCGGCCATCGCCGACGtggctccctctctcccctccatctGCTC AGTGGAGGAGTTCAAGTGGGCCCGTATGTGCGTCTgttcgcgcaattttg gTCTGGAGGTGAACAGAATCAGGACGGCGGCCTTGGTCCCCTACGCAGAT ATGCTCAACCACCAGCGGCCCCGCGAAACCAAGTGGACCTTCGACAACGC TCGTCAGGCTTTTACTATCACGACGCTCCAGCCCATCGCCCCCGGGGCCC AGGTCTATGATTCATACGGCCAGAAGTGTAAccaccgcttccttctcAAC TACGGTTTCGCCGTGGAAAATAACAGAGAAGCAGATAATTTCTGTCCAAA CGAGGTCGGGTTGTGgcaggagagagcgaggaagggggagagggaaagag gtaCAATGGGATGAATGCAACTGGATGCGGGAGTGAGCAGCAGTGGAGGT ACCGCAGACGAGTCCGCTGTCAACAAATACGACCGGTTCTTAAAATGGCT TTTGGACAACGGCGCACACTTTCCTCTACTAGAATTGAGGGAGTACGAAT CCGACGTCCGCGGGGTGCACgcgaaggaggcgctggcaggCGatcaggtg gtggtggaaatTCCCCTCCGGTGCCTGATCACGGtggagatggggaagga gtcCGACGTGGGAAAAGCGGTGCTCGCGTCCAATTTGCCCCTGGACGCAC CCAAGCACATCTTCTTGATGCTCTTCATGCTCACGGACAGGCGgaacccg tcctccttctttaaGCCCTACTACGatatccttccctcctccttgtcgaa CATGCCGATCTTCTGGACGGATGAGGAACTGGCTTACCTgaaagGCTCCC ACCTCCTGACCCAGATCGAGGAACGGAAGCGTGCCATTGAAGCCGACTAC GCGGCCATCGCCGACGtggctccctctctcccctccatctGCTCAGTGGA GGAGTTCAAGTGGGCCCGTATGTGCGTCTgttcgcgcaattttggTCTGG AGGTGAACAGAATCAGGACGGCGGCCTTGGTCCCCTACGCAGATATGCTC AACCACCAGCGGCCCCGCGAAACCAAGTGGACCTTCGACAACGCTCGTCA GGCTTTTACTATCACGACGCTCCAGCCCATCGCCCCCGGGGCCCAGGTCT ATGATTCATACGGCCAGAAGTGTAAccaccgcttccttctcAACTACGGT TTCGCCGTGGAAAATAACAGAGAAGCAGATAATTTCTGTCCAAACGAGGT CGGGTTGTGgcaggagagagcgaggaagggggagagggaaagaggtaCAA TGGGATGAATGCAACTGGATGCGGGAGTGAGCAGCAGTGGAGGTACCGCA GACGAGTCCGCTGTCAACAAATACGACCGGTTCTTAAAATGGCTTTTGGA CAACGGCGCACACTTTCCTCTACTAGAATTGAGGGAGTACGAATCCGACG TCCGCGGGGTGCACgcgaaggaggcgctggcaggCGatcaggtggtggtg gaaatTCCCCTCCGGTGCCTGATCACGGtggagatggggaaggagtcCGA CGTGGGAAAAGCGGTGCTCGCGTCCAATTTGCCCCTGGACGCACCCAAGC ACATCTTCTTGATGCTCTTCATGCTCACGGACAGGCGgaacccgtcctcc ttctttaaGCCCTACTACGatatccttccctcctccttgtcgaaCATGCC GATCTTCTGGACGGATGAGGAACTGGCTTACCTgaaagGCTCCCACCTCC TGACCCAGATCGAGGAACGGAAGCGTGCCATTGAAGCCGACTACGCGGCC ATCGCCGACGtggctccctctctcccctccatctGCTCAGTGGAGGAGTT CAAGTGGGCCCGTATGTGCGTCTgttcgcgcaattttggTCTGGAGGTGA ACAGAATCAGGACGGCGGCCTTGGTCCCCTACGCAGATATGCTCAACCAC CAGCGGCCCCGCGAAACCAAGTGGACCTTCGACAACGCTCGTCAGGCTTT TACTATCACGACGCTCCAGCCCATCGCCCCCGGGGCCCAGGTCTATGATT CATACGGCCAGAAGTGTAAccaccgcttccttctcAACTACGGTTTCGCC GTGGAAAATAACAGAGAAGCAGATAATTTCTGTCCAAACGAGGTCGGGTT GTGgcaggagagagcgaggaagggggagagggaaagaggtaCAATGGGAT GA back to top
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