EWM25607.1, cds5066 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|585107423|gb|EWM25607.1| (set domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 1 MQLDAGVSSSGGTADESAVNKYDRFLKWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGLWQERARKGERERGTMG 297
MQLDAGVSSSGGTADESAVNKYDRFLKWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGLWQERARKGERERGTMG
Sbjct: 1 MQLDAGVSSSGGTADESAVNKYDRFLKWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGLWQERARKGERERGTMG 297
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|676397215|ref|XP_009041885.1| (hypothetical protein AURANDRAFT_72732 [Aureococcus anophagefferens] >gi|323447496|gb|EGB03414.1| hypothetical protein AURANDRAFT_72732 [Aureococcus anophagefferens]) HSP 1 Score: 398.282 bits (1022), Expect = 1.958e-135 Identity = 182/270 (67.41%), Postives = 221/270 (81.85%), Query Frame = 0
Query: 13 TADESAVNKYDRFLKWLLDNGAHFP-LLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGL 281
T D S K F++WL +NG F +ELR Y+ +VRGVHA L ++++VE+PL+CLITVEMGK +DVG+AVL + L LDAPKH+FLMLF+L DRR+ S+FF PYYDILPS+LSNMPIFW +EL +LKGS+LLTQIEERKRAI+ADY AI + PS +C++EEFKWARMCVCSRNFG+ VN RT+A+VPYADMLNH RPRETKWTFDN+R AFTIT+LQ I+ G+Q+YDSYGQKCNHRFLLNYGFA+E+N+E D FCPNE L
Sbjct: 22 TGDASEAQKEIAFVQWLTENGGKFADCVELRSYDDEVRGVHATRDLETEEILVEVPLKCLITVEMGKATDVGRAVLEAELELDAPKHVFLMLFVLLDRRDSSTFFAPYYDILPSTLSNMPIFWQPDELEWLKGSYLLTQIEERKRAIKADYEAICGIWPSFIDVCTLEEFKWARMCVCSRNFGVVVNGARTSAMVPYADMLNHFRPRETKWTFDNSRGAFTITSLQKISVGSQIYDSYGQKCNHRFLLNYGFAIEDNKEPDGFCPNEAAL 291
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|299473350|emb|CBN77749.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 382.489 bits (981), Expect = 5.699e-127 Identity = 178/284 (62.68%), Postives = 215/284 (75.70%), Query Frame = 0
Query: 25 FLKWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPL---------------------------RCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGL 281
F +WLL+NGA FP LE+R Y+ +VRGVHA+ + D+V+VEIPL RCL+TVEMGK VG+AVLAS + DAPKHIFLMLF+LTD R P +FF+PYYD+LP++LSNMPIFWT+EE+ L+GS+L+TQ+EER +AIE DY I D+ P + ++EEFKWARMCVCSRNFGL++N +RT+ALVPYADMLNH RPRETKWT+DN R FTITTL I GAQVYDSYGQKCNHRFLLNYGFA+ENN+EA+ FCPNEV L
Sbjct: 79 FERWLLENGARFPRLEIRRYDPEVRGVHARGEIDPDEVIVEIPLKNKKQRRKRPTGWSLQKPEKDGSASWRRCLVTVEMGKALPVGQAVLASGVSFDAPKHIFLMLFILTDMRRPDTFFRPYYDLLPTTLSNMPIFWTEEEMRLLQGSYLVTQVEERNQAIEGDYGVICDLYPPFRDVATLEEFKWARMCVCSRNFGLDINGLRTSALVPYADMLNHYRPRETKWTYDNNRGGFTITTLHRILGGAQVYDSYGQKCNHRFLLNYGFAIENNQEANGFCPNEVPL 362
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|219126444|ref|XP_002183467.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405223|gb|EEC45167.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 363.614 bits (932), Expect = 3.109e-120 Identity = 173/293 (59.04%), Postives = 215/293 (73.38%), Query Frame = 0
Query: 20 NKYDRFLKWLLDNGAHFPLLELREYE-----------------------------SDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRN--PSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGL 281
+K++RF WL +NGAHF LELREY+ S++RGVHA+ ++ V IP RCLITVEMG+ + +G+A+L ++L LDAPKHIFLM+++L DR+ SSFF PYY+ILP +L NMPIFW+ EL L+GSHLL+QI +R +AI+ DY AI +VAPSL ++C+++EFKWARMCVCSRNFGL+++ RT+ALVP+ADMLNH RPRETKWTFD Q FTIT+LQ I GAQVYDSYGQKCNHRFLLNYGFAVE+NRE D FCPNEV L
Sbjct: 6 DKFERFEAWLRENGAHFEALELREYDCLNSSNTSASEVDDEEKKESPLTVSLEEVSEMRGVHARRSIPPHTTCVSIPRRCLITVEMGQATPIGRAILQADLDLDAPKHIFLMIYLLWDRKTHGSSSFFHPYYEILPPTLRNMPIFWSAFELQELEGSHLLSQIADRGQAIQDDYEAILEVAPSLGTLCTLDEFKWARMCVCSRNFGLQIDGHRTSALVPHADMLNHYRPRETKWTFDEVTQCFTITSLQSIQAGAQVYDSYGQKCNHRFLLNYGFAVEDNRELDGFCPNEVPL 298
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|1072235221|gb|OEU19950.1| (ribulose-1,5-bisphosphate carboxylase-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 359.762 bits (922), Expect = 2.650e-117 Identity = 177/304 (58.22%), Postives = 218/304 (71.71%), Query Frame = 0
Query: 19 VNKYDRFLKWLLDNGAHFPLLELREYE---------------------------------------SDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRR--NPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGL 281
++KY+RF WL +NGA F LLELREY+ S++RGVHA+ L + V V IP +CLITVEMG+E+ +G+A+L S+L LDAPKHIFLM+++L DR+ +SFF PYY+ILP +LSNMPIFW+ +E+ L+GS+LL QI++R AI DY AI +AP L IC+++EFKWARMCVCSRNFGL+++ RT+ALVP+ADMLNH RPRETKWTFD RQAFTIT+LQPI GAQVYDSYGQKCNHRFLLNYGFAVE+NRE D FCPNEV L
Sbjct: 41 LDKYERFEFWLRENGAQFDLLELREYDESPAKTREEDGAEEKKEQQIPIGNNFQEGHIPNGDEENDSEMRGVHARTHLPPNTVCVAIPRQCLITVEMGQETPIGQAILRSDLDLDAPKHIFLMVYLLWDRKVNGHNSFFHPYYEILPQTLSNMPIFWSPQEMDCLRGSYLLQQIQDRNEAIAEDYYAICQIAP-LSKICTLQEFKWARMCVCSRNFGLQIDGHRTSALVPHADMLNHYRPRETKWTFDEDRQAFTITSLQPIHAGAQVYDSYGQKCNHRFLLNYGFAVEDNRELDGFCPNEVPL 343
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|1210523407|dbj|GAX17731.1| (hypothetical protein FisN_24Hh203 [Fistulifera solaris]) HSP 1 Score: 354.755 bits (909), Expect = 3.461e-115 Identity = 171/302 (56.62%), Postives = 216/302 (71.52%), Query Frame = 0
Query: 10 SGGTADESAVNKYDRFLKWLLDNGAHFPLLELREY----------------------------ESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRR--NPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGL 281
S T ++ +K+DRF KWL DNGA F LE++ Y ES++RGVHA + + +V+ IP +CLITVEMG+ + +G+A+L S+L LDAPKHIFLM+++L DR+ +SFF PYY++LP +L NMPIFW+ EELA L GS+L QI +R +AI DY AI +VAP + + ++EEFKWARMCVCSRNFGL+++ RT+ALVP+ADMLNH RPRETKWTFD RQAFTIT+LQ I G+Q+YDSYGQKCNHRFLLNYGFAVE+NRE D FCPNEV L
Sbjct: 15 SPNTGSHTSGDKFDRFEKWLRDNGARFDQLEIKVYDDGSSSSRGRGDDSNEEKKDTVTKDDGEESEMRGVHALSHIPPNTLVMTIPRKCLITVEMGQATPIGQAILNSDLDLDAPKHIFLMVYLLWDRKVNGTNSFFYPYYEVLPKTLKNMPIFWSMEELAELNGSYLQQQIADRNQAIAEDYRAICEVAPQMRELATLEEFKWARMCVCSRNFGLQIDGHRTSALVPHADMLNHYRPRETKWTFDEDRQAFTITSLQHIGKGSQIYDSYGQKCNHRFLLNYGFAVEDNRELDGFCPNEVPL 316
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|1210518305|dbj|GAX22917.1| (hypothetical protein FisN_24Lh203 [Fistulifera solaris]) HSP 1 Score: 349.362 bits (895), Expect = 2.823e-113 Identity = 168/293 (57.34%), Postives = 211/293 (72.01%), Query Frame = 0
Query: 20 NKYDRFLKWLLDNGAHFPLLELREY-----------------------------ESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRR--NPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEVGL 281
+K+DRF KWL DNGA F LE++ Y ES++RGVHA + + +V+ IP +CLITVEMG+ + +G+A+L S+L LDAPKHIFLM+++L DR+ +SFF PYY++LP +L NMPIFW+ ELA L GS+L QI +R +AI DY AI +VAP + + ++EEFKWARMCVCSRNFGL+++ RT+ALVP+ADMLNH RPRETKWTFD RQAFTIT+LQ I G+Q+YDSYGQKCNHRFLLNYGFAVE+NRE D FCPNEV L
Sbjct: 14 DKFDRFEKWLRDNGARFDQLEIKVYDDGSSSSSRGRGDDSNEEKKDTVTKDEGEESEMRGVHALSHIPPNTLVMSIPRKCLITVEMGQATPIGQAILNSDLDLDAPKHIFLMVYLLWDRKVNGKNSFFFPYYEVLPKTLKNMPIFWSKGELAELNGSYLQQQIADRNQAIAEDYRAICEVAPQMRELATLEEFKWARMCVCSRNFGLQIDGHRTSALVPHADMLNHYRPRETKWTFDEDRQAFTITSLQHIGNGSQIYDSYGQKCNHRFLLNYGFAVEDNRELDGFCPNEVPL 306
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|695444243|ref|XP_009533919.1| (hypothetical protein PHYSODRAFT_361758 [Phytophthora sojae] >gi|348671353|gb|EGZ11174.1| hypothetical protein PHYSODRAFT_361758 [Phytophthora sojae]) HSP 1 Score: 327.791 bits (839), Expect = 1.469e-106 Identity = 154/256 (60.16%), Postives = 194/256 (75.78%), Query Frame = 0
Query: 25 FLKWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTD-RRNPSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEV 279
++WL NGA L L+EY +VRGVH+++ LA + ++ IP +CLITVEMGK++D+G+ +LA N+ APKHIFLM+F+LTD R +SFF+ YY LPS+LSNMPIFW+DEEL +LKGS+++ QI+ERK AI DY I V P+ S++ F WARM VCSRNFGL ++ ++TAALVP+ADMLNH RPRET WTFD + AFTIT+L I GAQVYDSYG+KCNHRFLLNYGFAVE+N E D PNEV
Sbjct: 45 LIQWLEGNGADTKKLALQEYAPEVRGVHSRKVLAPGERILVIPKKCLITVEMGKQTDIGRKLLARNVDFVAPKHIFLMMFLLTDMERAETSFFRNYYSTLPSTLSNMPIFWSDEELGWLKGSYIIQQIQERKAAIRKDYDVICRVDPAFARF-SLDRFSWARMIVCSRNFGLTIDGVKTAALVPFADMLNHYRPRETSWTFDQSIDAFTITSLGTIGTGAQVYDSYGKKCNHRFLLNYGFAVEDNTEEDGRNPNEV 299
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|675206285|ref|XP_008912027.1| (hypothetical protein PPTG_16166 [Phytophthora parasitica INRA-310] >gi|566014289|gb|ETI37200.1| hypothetical protein F443_16775 [Phytophthora parasitica P1569] >gi|567951733|gb|ETK77427.1| hypothetical protein L915_16307 [Phytophthora parasitica] >gi|567980395|gb|ETL30858.1| hypothetical protein L916_16204 [Phytophthora parasitica] >gi|568009911|gb|ETL84106.1| hypothetical protein L917_16013 [Phytophthora parasitica] >gi|568039810|gb|ETM37286.1| hypothetical protein L914_16133 [Phytophthora parasitica] >gi|568087677|gb|ETN02545.1| hypothetical protein PPTG_16166 [Phytophthora parasitica INRA-310] >gi|570941791|gb|ETP07048.1| hypothetical protein F441_16611 [Phytophthora parasitica CJ01A1] >gi|570972173|gb|ETP35145.1| hypothetical protein F442_16603 [Phytophthora parasitica P10297] >gi|970632125|gb|KUF78508.1| Histone-lysine N-methyltransferase setd3 [Phytophthora nicotianae]) HSP 1 Score: 325.094 bits (832), Expect = 1.204e-105 Identity = 155/270 (57.41%), Postives = 198/270 (73.33%), Query Frame = 0
Query: 11 GGTADESAVNKYDRFLKWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRN-PSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEV 279
G E V + ++WL NGA L L+EY +VRGVH+++ L + ++ IP +CLITVEMGK++D+G+ +LA N+ APKHIFLM+F+LTD + +SFF+ YY LPS+LSNMPIFW++EEL++LKGS+++ QI+ERK AI DY I V PS S++ F WARM VCSRNFGL ++ ++TAALVP+ADMLNH RPRET WTFD + AFTIT+L I GAQVYDSYG+KCNHRFLLNYGFAVE+N E D PNEV
Sbjct: 25 NGLTKEDVVGQ--ELIQWLESNGADTKKLTLQEYAPEVRGVHSRKVLVPGERILVIPKKCLITVEMGKQTDIGRKLLARNVDFVAPKHIFLMMFLLTDMEHVETSFFRNYYSTLPSTLSNMPIFWSEEELSWLKGSYIIQQIQERKAAIRKDYDVICRVDPSFARF-SLDRFSWARMIVCSRNFGLTIDGVKTAALVPFADMLNHYRPRETSWTFDQSIDAFTITSLGTIGTGAQVYDSYGKKCNHRFLLNYGFAVEDNTEEDGRNPNEV 291
BLAST of EWM25607.1 vs. NCBI_GenBank
Match: gi|570317992|gb|ETO65940.1| (hypothetical protein F444_16787 [Phytophthora parasitica P1976]) HSP 1 Score: 325.094 bits (832), Expect = 1.244e-105 Identity = 155/269 (57.62%), Postives = 198/269 (73.61%), Query Frame = 0
Query: 12 GTADESAVNKYDRFLKWLLDNGAHFPLLELREYESDVRGVHAKEALAGDQVVVEIPLRCLITVEMGKESDVGKAVLASNLPLDAPKHIFLMLFMLTDRRN-PSSFFKPYYDILPSSLSNMPIFWTDEELAYLKGSHLLTQIEERKRAIEADYAAIADVAPSLPSICSVEEFKWARMCVCSRNFGLEVNRIRTAALVPYADMLNHQRPRETKWTFDNARQAFTITTLQPIAPGAQVYDSYGQKCNHRFLLNYGFAVENNREADNFCPNEV 279
G E V + ++WL NGA L L+EY +VRGVH+++ L + ++ IP +CLITVEMGK++D+G+ +LA N+ APKHIFLM+F+LTD + +SFF+ YY LPS+LSNMPIFW++EEL++LKGS+++ QI+ERK AI DY I V PS S++ F WARM VCSRNFGL ++ ++TAALVP+ADMLNH RPRET WTFD + AFTIT+L I GAQVYDSYG+KCNHRFLLNYGFAVE+N E D PNEV
Sbjct: 26 GLTKEDVVGQ--ELIQWLESNGADTKKLTLQEYAPEVRGVHSRKVLVPGERILVIPKKCLITVEMGKQTDIGRKLLARNVDFVAPKHIFLMMFLLTDMEHVETSFFRNYYSTLPSTLSNMPIFWSEEELSWLKGSYIIQQIQERKAAIRKDYDVICRVDPSFARF-SLDRFSWARMIVCSRNFGLTIDGVKTAALVPFADMLNHYRPRETSWTFDQSIDAFTITSLGTIGTGAQVYDSYGKKCNHRFLLNYGFAVEDNTEEDGRNPNEV 291 The following BLAST results are available for this feature:
BLAST of EWM25607.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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