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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101047g1.5282.mrna |
| Orig protein id | gnl|cribi|Naga_101047g1.5282 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:52412..53334 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5077 ID=rna5077|Name=rna5077|organism=Nannochloropsis gaditana|type=mRNA|length=582bp
ATGCTCCTCGCCGTACGCCGTCAACTCGTACATTCAAGACACAGAATTGC
CACGATAGCTCCGTCATCGTCAAAGTCTCCTACTTGCTTATTTAAGACGA
GGGGGAGGAATCTCGGTACAAGCAGCAGTAATGGGAACGGACACAATGGT
AGGCAGGTTCCTGCCGTCACACCCACAGCAATGTGCAAGGCAGGGGGGAT
CGGAGTCGTGGCAGGCGTCTTTGGCTCACTAGTAGGCATGGGAGGTGCCT
TCGTTCTGATCCCGGCTTTGACCGGCTTGTTGAAATTCTCACAGCACCAG
GCGCACGCCCTGTACGTGGCCGGATTGGGCATGATGACGGCGCGCATGGG
CGCCGTCGTGTCCGGGAGGCTCTCCGCCGCCACCTTGCAAAGGCTTTGTG
GTGTATTCCAAGTCATTGTGGCGCCCACCGTCCCCCTCAGGAACGAGATC
CTGGCCTTCTTTGGCAGCAATGAGGAAGGGAAAGGGGAAGGGAAGGAGGA
AGGGATGGGGGGGGCGAGTGACGAGCAGAATGATTGGACACGGCGTCTCC
AGCTCATGAGCATTGGGGCAGGTAGCGGGTAA back to topprotein sequence of rna5077 >rna5077-protein ID=rna5077-protein|Name=rna5077|organism=Nannochloropsis gaditana|type=polypeptide|length=83bp
MVPTALVGTHSHHAQGHVVWSFVAPLAVGSLCGSFLGGKEIAMQIPENYL
KWGFGIMMVVLGSKTIYSAGPLKSMALSASKAK back to topmRNA from alignment at CM002465.1:52412..53334+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5077 ID=rna5077|Name=rna5077|organism=Nannochloropsis gaditana|type=mRNA|length=923bp|location=Sequence derived from alignment at CM002465.1:52412..53334+ (Nannochloropsis gaditana)
ccccttcccctctcccaccccacATCCTAGGCACTGGGGACGTCACTGGC
CGCCATGGTCCCTACGGCCCTGGTTGGCACTCACTCGCACCATGCACAAG
GTATGTAGTTGAAGTGCTGTGGGCAACCTTCTGGGCCAGGACGGCGCGAA
AAGGACGGTGCACAGAGCTCCGCGTTGGGCCCAACCTAGCCTAGCTTCCA
CCTTACCTTTTCCGCCATGGAATTTCGATATGTGAACCAGGGCATGTGGT
CTGGTCGTTTGTGGCTCCGCTGGCTGTGGGCTCTCTGTGCGGGAGCTtct
tgggggggaaagagatcGCAATGCAGGTACGACGGAGAggacagaggagg
caggggacgTGCAACTCGCGAaagagaggtggagaagaTAGATGAAGCGT
GCGTGCTTGAATGATTTTACCAAGAATATTATCATTAATATTGTTACCTA
TAATTACACACGAAAAGACGTCTTTGTACATGATTGCGatgccaccacct
ccataATTGACAGCTTCCTAACCATctccatttctttttttctttttcct
tgttCAATCCAGATTCCTGAAAATTACTTGAAGTGGGGCTTTGGGATTAT
GATGGTCGTGCTAGGGAGCAAAACCATTTATTCTGCTGGACCGTTGAAAA
GCATGGCCCTATCGGCATCAAAGGCCAAGTGAAGCAGATGAGGGAAAACC
TATataaaagaggagggatttaatgggagaaaagaaggagaatggGGATT
ACAGTGGAAAATGTGCATAACTTTTAAATTGGATGAATTGAAATGTATGT
AAGGGATTAAAGAGTTAGATGTCGAAATCGATTATTAAAGGGAAAAATTG
TTGGTGCAAGGTCAGGGGGTAAGGAGGTTAACTGGCACACCAAAAGCAAA
CAAATAGCAACGCGTACTTGTTT back to topCoding sequence (CDS) from alignment at CM002465.1:52412..53334+ >rna5077 ID=rna5077|Name=rna5077|organism=Nannochloropsis gaditana|type=CDS|length=756bp|location=Sequence derived from alignment at CM002465.1:52412..53334+ (Nannochloropsis gaditana)
ATGGTCCCTACGGCCCTGGTTGGCACTCACTCGCACCATGCACAAGGGCA
TGTGGTCTGGTCGTTTGTGGCTCCGCTGGCTGTGGGCTCTCTGTGCGGGA
GCTtcttgggggggaaagagatcGCAATGCAGATTCCTGAAAATTACTTG
AAGTGGGGCTTTGGGATTATGATGGTCGTGCTAGGGAGCAAAACCATTTA
TTCTGCTGGACCGTTGAAAAGCATGGCCCTATCGGCATCAAAGGCCAAGT
GAATGGTCCCTACGGCCCTGGTTGGCACTCACTCGCACCATGCACAAGGG
CATGTGGTCTGGTCGTTTGTGGCTCCGCTGGCTGTGGGCTCTCTGTGCGG
GAGCTtcttgggggggaaagagatcGCAATGCAGATTCCTGAAAATTACT
TGAAGTGGGGCTTTGGGATTATGATGGTCGTGCTAGGGAGCAAAACCATT
TATTCTGCTGGACCGTTGAAAAGCATGGCCCTATCGGCATCAAAGGCCAA
GTGAATGGTCCCTACGGCCCTGGTTGGCACTCACTCGCACCATGCACAAG
GGCATGTGGTCTGGTCGTTTGTGGCTCCGCTGGCTGTGGGCTCTCTGTGC
GGGAGCTtcttgggggggaaagagatcGCAATGCAGATTCCTGAAAATTA
CTTGAAGTGGGGCTTTGGGATTATGATGGTCGTGCTAGGGAGCAAAACCA
TTTATTCTGCTGGACCGTTGAAAAGCATGGCCCTATCGGCATCAAAGGCC
AAGTGA back to top
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