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Properties
| Property Name | Value |
|---|
| Product | Cyclophilin-like peptidyl-prolyl cis-trans isomerase |
| Orig transcript id | gnl|cribi|Naga_100037g14.10736.mrna |
| Orig protein id | gnl|cribi|Naga_100037g14.10736 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:1041786..1043336 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5047 ID=rna5047|Name=rna5047|organism=Nannochloropsis gaditana|type=mRNA|length=825bp
TTATGCCTAGCACTCAGAGTCTCGTCTTCCTTCCCTGTGGCCGGGATGGA
GTTTAGGGTGGAAGTCTCTGTCGTGAATCGGGGCCACGGTCATTGTATCC
ATGGCCGAAGCACGCATGAGGCATCCCCGTTATCACGTGGTTACCTGCCT
CCCTTTCTATCCGACCTCCGGCTCCTCAACTGGTGCATGCCTCATGGCGC
GACAGACACCGGCTTGGTCACACATTAGCTACTCACATCGATGTCAAGCC
CTCTGCATTGTCGAGTCCCCTCACGCTATTTATTTTCCTACTTGCACTCT
TAGGTCTCGGTTCGCGGCAACTAGCCTTCATCATGGCGGATGCCGCCAAC
TTTCGGCAGCGGAACCGTCTCTCTCCAGACGTGACTCGCGTGCTGTATGT
TCGTAACCTTCCCTTCAAGCTTTCCTCCGAGGAACTTTACGACATTTTTG
GCAAATATGGACCGATAAGACAGATCCGCGTTGGAGCCGCCAACGAAAAT
CGAGGGAAGGCTTTCGTGATTTACGAAGATATCTACGACGCCAAGGACGC
ACTTGAGCACTTGAATGGCTTCAATGTCTGCGGTCGGTACTTGGTGGTCC
TCTACTTCCACCCTGAGAAGGAGCAGAAACGCATGAACCTGGAGAAGCAG
CGGAAGGAGGTGGAGGAGCTGAGGAAAATGGTGGACGCTGGGAGGAAGGG
GACATGACGGGGGGGTGGCACGGGTTACATGGAGGCAAATAGGCTGCTAA
CGAAATAAAGGAATGAAGAACCAAGACCTCGCACCGCTTGAGAGCGTGCC
GGATTATTCTGACAGAATTCATTCC back to topprotein sequence of rna5047 >rna5047-protein ID=rna5047-protein|Name=rna5047|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MSRSSSSSFLTLVACLVLSSYSASAFMLPRISSLAFQRVGPSVARAPAHA
AGRRMMLSRGLAMAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFR
QIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDEN
FTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMD
VVRKVEAVGSPRGTPSKKVVIVDSGELKTSVGGRSGSRKGKWRVARHLHC
IDNVMDAKLYLTHVRSNKGHNKGHNHSKIFDRNEFCQNNPARSQAVRGLG
SSFLYFVSSLFASM back to topmRNA from alignment at CM002464.1:1041786..1043336- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5047 ID=rna5047|Name=rna5047|organism=Nannochloropsis gaditana|type=mRNA|length=1551bp|location=Sequence derived from alignment at CM002464.1:1041786..1043336- (Nannochloropsis gaditana)
ATGAGCCGATCTTCCTCCTCGTCTTTTTTAACCCTCGTCGCTTGTCTCGT
GCTTTCCAGCTACAGCGCATCTGCCTTCATGTTACCGCGAATTTCCTCTT
TAGCCTTCCAGCGCGTGGGACCCTCGGTTGCGCGTGCACCCGCCCATGCC
GCAGGCCGTCGTATGATGCTTTCCCGTGGCCTGGCAATGGCGGCCAACCC
TCAGGTGAGCGGAGGTTGGGAAATCTAAAAGAAACGCGAAGATACTTGGC
GCTGTTTTCCAAACAGTCTGACTAAGCTACTTAAGAGTTGGAATCGCCTG
CCAAAAAGCTTCGATTTGAACATGCAGATATAACTTCAATTTCATGTCGT
CTCCTGTATGGCTTTCTCGGGTAAAGGTGTATTTCGACGTTGAAATCGGG
GGCGAGAAAGCTGGTCGTATTACCATGGAGCTCGCGGCGGACGTGGCTCC
CAAAACTGCGGGTGAGTTTCTGCGGGACCTCTCCGCCGTATAGGTCACTG
GTTGCGTCGTATAGGTCACTGGTTGTAGGCTGATGTCCCCTCCCTGTTCA
CCCGGCAGAAAATTTCCGGCAGATCGCCACCGGTGAGGCTGGTTTCACGT
ACAAGGGGTCTGCCTTCCACCGAATCATCCCGGACTTCATGCTCCAAGGT
GGAGACATCACCCGAGGAGATGGCACTGGTGGCCAGTCTATCTACGGCCG
AACCTGTACGTCACACAGAAAACGGAATTGGATCCACCGCGAAGCATTTG
GAAGAGTCTTTCTCGCTCTAGGATAGCGCGGTTGAAGCCCGTTCATGGCC
CTCCTTCTCCTCCCCCTTCCTCGTTTTCTTCCTCTCCTCGGACTACCCAT
CCCTATACCACAGTCCCGGACGAGAACTTTACGCTCAAACACAAGGGCGT
CGGGCTCCTGTCCATGGCCAACGCCGGGCCCAACACGAACGGCTCCCAGT
TCTTCATCACCACCGTCGAGACTCCTTGGTACGTATCGGGCGGTTCTCGT
CGCCTCCCTCCCCTCTTGCTGCCTTTTCCCGCTCTGAGAATGGCATACAC
CCCCCCTTATCCTCGTGGTACCTTTTCCTTGTTCCACGCGACAGGCTGGA
TGGCCGGCACACGGTCTTCGGGCGGGTCACGGAGGGCATGGACGTGGTGC
GGAAGGTGGAGGCGGTGGGGTCCCCACGGGGAACGCCGAGCAAGAAAGTG
GTGATCGTGGACTCAGGAGAGCTCAAGTAGACGGGATGAGCATGGGCAGA
GAGGGCATTGATTAAGGGGGGGGAGGGAGGGGCGTTCAGAACTAGTGTCG
GTGGAAGAAGCGGATCTAGAAAAGGAAAGTGGAGGGTGGCGCGTCACTTG
CACTGCATCGACAATGTGATGGACGCGAAGCTTTACCTCACTCATGTGCG
GAGCAATAAGGGACACAATAAGGGACACAATCATTCCAAAATCTTCGACA
GGAATGAATTCTGTCAGAATAATCCGGCACGCTCTCAAGCGGTGCGAGGT
CTTGGTTCTTCATTCCTTTATTTCGTTAGCAGCCTATTTGCCTCCATGTA
A back to topCoding sequence (CDS) from alignment at CM002464.1:1041786..1043336- >rna5047 ID=rna5047|Name=rna5047|organism=Nannochloropsis gaditana|type=CDS|length=5670bp|location=Sequence derived from alignment at CM002464.1:1041786..1043336- (Nannochloropsis gaditana)
AACTAGTGTCGGTGGAAGAAGCGGATCTAGAAAAGGAAAGTGGAGGGTGG
CGCGTCACTTGCACTGCATCGACAATGTGATGGACGCGAAGCTTTACCTC
ACTCATGTGCGGAGCAATAAGGGACACAATAAGGGACACAATCATTCCAA
AATCTTCGACAGGAATGAATTCTGTCAGAATAATCCGGCACGCTCTCAAG
CGGTGCGAGGTCTTGGTTCTTCATTCCTTTATTTCGTTAGCAGCCTATTT
GCCTCCATGTAAGCTGGATGGCCGGCACACGGTCTTCGGGCGGGTCACGG
AGGGCATGGACGTGGTGCGGAAGGTGGAGGCGGTGGGGTCCCCACGGGGA
ACGCCGAGCAAGAAAGTGGTGATCGTGGACTCAGGAGAGCTCAATCCCGG
ACGAGAACTTTACGCTCAAACACAAGGGCGTCGGGCTCCTGTCCATGGCC
AACGCCGGGCCCAACACGAACGGCTCCCAGTTCTTCATCACCACCGTCGA
GACTCCTTGAAAATTTCCGGCAGATCGCCACCGGTGAGGCTGGTTTCACG
TACAAGGGGTCTGCCTTCCACCGAATCATCCCGGACTTCATGCTCCAAGG
TGGAGACATCACCCGAGGAGATGGCACTGGTGGCCAGTCTATCTACGGCC
GAACCTGTGTATTTCGACGTTGAAATCGGGGGCGAGAAAGCTGGTCGTAT
TACCATGGAGCTCGCGGCGGACGTGGCTCCCAAAACTGCGGATGAGCCGA
TCTTCCTCCTCGTCTTTTTTAACCCTCGTCGCTTGTCTCGTGCTTTCCAG
CTACAGCGCATCTGCCTTCATGTTACCGCGAATTTCCTCTTTAGCCTTCC
AGCGCGTGGGACCCTCGGTTGCGCGTGCACCCGCCCATGCCGCAGGCCGT
CGTATGATGCTTTCCCGTGGCCTGGCAATGGCGGCCAACCCTCAGAACTA
GTGTCGGTGGAAGAAGCGGATCTAGAAAAGGAAAGTGGAGGGTGGCGCGT
CACTTGCACTGCATCGACAATGTGATGGACGCGAAGCTTTACCTCACTCA
TGTGCGGAGCAATAAGGGACACAATAAGGGACACAATCATTCCAAAATCT
TCGACAGGAATGAATTCTGTCAGAATAATCCGGCACGCTCTCAAGCGGTG
CGAGGTCTTGGTTCTTCATTCCTTTATTTCGTTAGCAGCCTATTTGCCTC
CATGTAAGCTGGATGGCCGGCACACGGTCTTCGGGCGGGTCACGGAGGGC
ATGGACGTGGTGCGGAAGGTGGAGGCGGTGGGGTCCCCACGGGGAACGCC
GAGCAAGAAAGTGGTGATCGTGGACTCAGGAGAGCTCAATCCCGGACGAG
AACTTTACGCTCAAACACAAGGGCGTCGGGCTCCTGTCCATGGCCAACGC
CGGGCCCAACACGAACGGCTCCCAGTTCTTCATCACCACCGTCGAGACTC
CTTGAAAATTTCCGGCAGATCGCCACCGGTGAGGCTGGTTTCACGTACAA
GGGGTCTGCCTTCCACCGAATCATCCCGGACTTCATGCTCCAAGGTGGAG
ACATCACCCGAGGAGATGGCACTGGTGGCCAGTCTATCTACGGCCGAACC
TGTGTATTTCGACGTTGAAATCGGGGGCGAGAAAGCTGGTCGTATTACCA
TGGAGCTCGCGGCGGACGTGGCTCCCAAAACTGCGGATGAGCCGATCTTC
CTCCTCGTCTTTTTTAACCCTCGTCGCTTGTCTCGTGCTTTCCAGCTACA
GCGCATCTGCCTTCATGTTACCGCGAATTTCCTCTTTAGCCTTCCAGCGC
GTGGGACCCTCGGTTGCGCGTGCACCCGCCCATGCCGCAGGCCGTCGTAT
GATGCTTTCCCGTGGCCTGGCAATGGCGGCCAACCCTCAGAACTAGTGTC
GGTGGAAGAAGCGGATCTAGAAAAGGAAAGTGGAGGGTGGCGCGTCACTT
GCACTGCATCGACAATGTGATGGACGCGAAGCTTTACCTCACTCATGTGC
GGAGCAATAAGGGACACAATAAGGGACACAATCATTCCAAAATCTTCGAC
AGGAATGAATTCTGTCAGAATAATCCGGCACGCTCTCAAGCGGTGCGAGG
TCTTGGTTCTTCATTCCTTTATTTCGTTAGCAGCCTATTTGCCTCCATGT
AAGCTGGATGGCCGGCACACGGTCTTCGGGCGGGTCACGGAGGGCATGGA
CGTGGTGCGGAAGGTGGAGGCGGTGGGGTCCCCACGGGGAACGCCGAGCA
AGAAAGTGGTGATCGTGGACTCAGGAGAGCTCAATCCCGGACGAGAACTT
TACGCTCAAACACAAGGGCGTCGGGCTCCTGTCCATGGCCAACGCCGGGC
CCAACACGAACGGCTCCCAGTTCTTCATCACCACCGTCGAGACTCCTTGA
AAATTTCCGGCAGATCGCCACCGGTGAGGCTGGTTTCACGTACAAGGGGT
CTGCCTTCCACCGAATCATCCCGGACTTCATGCTCCAAGGTGGAGACATC
ACCCGAGGAGATGGCACTGGTGGCCAGTCTATCTACGGCCGAACCTGTGT
ATTTCGACGTTGAAATCGGGGGCGAGAAAGCTGGTCGTATTACCATGGAG
CTCGCGGCGGACGTGGCTCCCAAAACTGCGGATGAGCCGATCTTCCTCCT
CGTCTTTTTTAACCCTCGTCGCTTGTCTCGTGCTTTCCAGCTACAGCGCA
TCTGCCTTCATGTTACCGCGAATTTCCTCTTTAGCCTTCCAGCGCGTGGG
ACCCTCGGTTGCGCGTGCACCCGCCCATGCCGCAGGCCGTCGTATGATGC
TTTCCCGTGGCCTGGCAATGGCGGCCAACCCTCAGAACTAGTGTCGGTGG
AAGAAGCGGATCTAGAAAAGGAAAGTGGAGGGTGGCGCGTCACTTGCACT
GCATCGACAATGTGATGGACGCGAAGCTTTACCTCACTCATGTGCGGAGC
AATAAGGGACACAATAAGGGACACAATCATTCCAAAATCTTCGACAGGAA
TGAATTCTGTCAGAATAATCCGGCACGCTCTCAAGCGGTGCGAGGTCTTG
GTTCTTCATTCCTTTATTTCGTTAGCAGCCTATTTGCCTCCATGTAAGCT
GGATGGCCGGCACACGGTCTTCGGGCGGGTCACGGAGGGCATGGACGTGG
TGCGGAAGGTGGAGGCGGTGGGGTCCCCACGGGGAACGCCGAGCAAGAAA
GTGGTGATCGTGGACTCAGGAGAGCTCAATCCCGGACGAGAACTTTACGC
TCAAACACAAGGGCGTCGGGCTCCTGTCCATGGCCAACGCCGGGCCCAAC
ACGAACGGCTCCCAGTTCTTCATCACCACCGTCGAGACTCCTTGAAAATT
TCCGGCAGATCGCCACCGGTGAGGCTGGTTTCACGTACAAGGGGTCTGCC
TTCCACCGAATCATCCCGGACTTCATGCTCCAAGGTGGAGACATCACCCG
AGGAGATGGCACTGGTGGCCAGTCTATCTACGGCCGAACCTGTGTATTTC
GACGTTGAAATCGGGGGCGAGAAAGCTGGTCGTATTACCATGGAGCTCGC
GGCGGACGTGGCTCCCAAAACTGCGGATGAGCCGATCTTCCTCCTCGTCT
TTTTTAACCCTCGTCGCTTGTCTCGTGCTTTCCAGCTACAGCGCATCTGC
CTTCATGTTACCGCGAATTTCCTCTTTAGCCTTCCAGCGCGTGGGACCCT
CGGTTGCGCGTGCACCCGCCCATGCCGCAGGCCGTCGTATGATGCTTTCC
CGTGGCCTGGCAATGGCGGCCAACCCTCAGAACTAGTGTCGGTGGAAGAA
GCGGATCTAGAAAAGGAAAGTGGAGGGTGGCGCGTCACTTGCACTGCATC
GACAATGTGATGGACGCGAAGCTTTACCTCACTCATGTGCGGAGCAATAA
GGGACACAATAAGGGACACAATCATTCCAAAATCTTCGACAGGAATGAAT
TCTGTCAGAATAATCCGGCACGCTCTCAAGCGGTGCGAGGTCTTGGTTCT
TCATTCCTTTATTTCGTTAGCAGCCTATTTGCCTCCATGTAAGCTGGATG
GCCGGCACACGGTCTTCGGGCGGGTCACGGAGGGCATGGACGTGGTGCGG
AAGGTGGAGGCGGTGGGGTCCCCACGGGGAACGCCGAGCAAGAAAGTGGT
GATCGTGGACTCAGGAGAGCTCAATCCCGGACGAGAACTTTACGCTCAAA
CACAAGGGCGTCGGGCTCCTGTCCATGGCCAACGCCGGGCCCAACACGAA
CGGCTCCCAGTTCTTCATCACCACCGTCGAGACTCCTTGAAAATTTCCGG
CAGATCGCCACCGGTGAGGCTGGTTTCACGTACAAGGGGTCTGCCTTCCA
CCGAATCATCCCGGACTTCATGCTCCAAGGTGGAGACATCACCCGAGGAG
ATGGCACTGGTGGCCAGTCTATCTACGGCCGAACCTGTGTATTTCGACGT
TGAAATCGGGGGCGAGAAAGCTGGTCGTATTACCATGGAGCTCGCGGCGG
ACGTGGCTCCCAAAACTGCGGATGAGCCGATCTTCCTCCTCGTCTTTTTT
AACCCTCGTCGCTTGTCTCGTGCTTTCCAGCTACAGCGCATCTGCCTTCA
TGTTACCGCGAATTTCCTCTTTAGCCTTCCAGCGCGTGGGACCCTCGGTT
GCGCGTGCACCCGCCCATGCCGCAGGCCGTCGTATGATGCTTTCCCGTGG
CCTGGCAATGGCGGCCAACCCTCAGAACTAGTGTCGGTGGAAGAAGCGGA
TCTAGAAAAGGAAAGTGGAGGGTGGCGCGTCACTTGCACTGCATCGACAA
TGTGATGGACGCGAAGCTTTACCTCACTCATGTGCGGAGCAATAAGGGAC
ACAATAAGGGACACAATCATTCCAAAATCTTCGACAGGAATGAATTCTGT
CAGAATAATCCGGCACGCTCTCAAGCGGTGCGAGGTCTTGGTTCTTCATT
CCTTTATTTCGTTAGCAGCCTATTTGCCTCCATGTAAGCTGGATGGCCGG
CACACGGTCTTCGGGCGGGTCACGGAGGGCATGGACGTGGTGCGGAAGGT
GGAGGCGGTGGGGTCCCCACGGGGAACGCCGAGCAAGAAAGTGGTGATCG
TGGACTCAGGAGAGCTCAATCCCGGACGAGAACTTTACGCTCAAACACAA
GGGCGTCGGGCTCCTGTCCATGGCCAACGCCGGGCCCAACACGAACGGCT
CCCAGTTCTTCATCACCACCGTCGAGACTCCTTGAAAATTTCCGGCAGAT
CGCCACCGGTGAGGCTGGTTTCACGTACAAGGGGTCTGCCTTCCACCGAA
TCATCCCGGACTTCATGCTCCAAGGTGGAGACATCACCCGAGGAGATGGC
ACTGGTGGCCAGTCTATCTACGGCCGAACCTGTGTATTTCGACGTTGAAA
TCGGGGGCGAGAAAGCTGGTCGTATTACCATGGAGCTCGCGGCGGACGTG
GCTCCCAAAACTGCGGATGAGCCGATCTTCCTCCTCGTCTTTTTTAACCC
TCGTCGCTTGTCTCGTGCTTTCCAGCTACAGCGCATCTGCCTTCATGTTA
CCGCGAATTTCCTCTTTAGCCTTCCAGCGCGTGGGACCCTCGGTTGCGCG
TGCACCCGCCCATGCCGCAGGCCGTCGTATGATGCTTTCCCGTGGCCTGG
CAATGGCGGCCAACCCTCAG back to top
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