EWM25647.1, cds5035 (CDS) Nannochloropsis gaditana

Overview
NameEWM25647.1
Unique Namecds5035
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:1043133..1043336 -
Alignment locationCM002464.1:1042876..1042960 -
Alignment locationCM002464.1:1042632..1042778 -
Alignment locationCM002464.1:1042359..1042473 -
Alignment locationCM002464.1:1042111..1042242 -
Alignment locationCM002464.1:1041786..1042047 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25647.1
ProductCyclophilin-like peptidyl-prolyl cis-trans isomerase
Orig transcript idgnl|cribi|Naga_100037g14.10736.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:1043133..1043336 -
CM002464.1supercontigCM002464.1:1042876..1042960 -
CM002464.1supercontigCM002464.1:1042632..1042778 -
CM002464.1supercontigCM002464.1:1042359..1042473 -
CM002464.1supercontigCM002464.1:1042111..1042242 -
CM002464.1supercontigCM002464.1:1041786..1042047 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005515protein binding
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR020892Cyclophilin-type_PPIase_CS
IPR024936Cyclophilin-type_PPIase
IPR029000Cyclophilin-like_dom
IPR002130Cyclophilin-type_PPIase_dom
Homology
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|585107475|gb|EWM25647.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana])

HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
Query:    1 MSRSSSSSFLTLVACLVLSSYSASAFMLPRISSLAFQRVGPSVARAPAHAAGRRMMLSRGLAMAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGELKTSVGGRSGSRKGKWRVARHLHCIDNVMDAKLYLTHVRSNKGHNKGHNHSKIFDRNEFCQNNPARSQAVRGLGSSFLYFVSSLFASM 314
            MSRSSSSSFLTLVACLVLSSYSASAFMLPRISSLAFQRVGPSVARAPAHAAGRRMMLSRGLAMAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGELKTSVGGRSGSRKGKWRVARHLHCIDNVMDAKLYLTHVRSNKGHNKGHNHSKIFDRNEFCQNNPARSQAVRGLGSSFLYFVSSLFASM
Sbjct:    1 MSRSSSSSFLTLVACLVLSSYSASAFMLPRISSLAFQRVGPSVARAPAHAAGRRMMLSRGLAMAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGELKTSVGGRSGSRKGKWRVARHLHCIDNVMDAKLYLTHVRSNKGHNKGHNHSKIFDRNEFCQNNPARSQAVRGLGSSFLYFVSSLFASM 314          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|1084858246|gb|OGQ88634.1| (peptidylprolyl isomerase [Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24])

HSP 1 Score: 258.455 bits (659), Expect = 2.059e-83
Identity = 120/166 (72.29%), Postives = 140/166 (84.34%), Query Frame = 0
Query:   62 AMAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGEL 227
            A+AANP+V+FD+ IG EKAGRI MEL ADV PKTAENFRQ+AT E GF YKGS FHRIIP FMLQGGDIT GDGTGG+SIYGRTF DENF  +H G G LSMANAGPNTNGSQFFITT +TPWLDG+H VFG+V EG++VV+++E +G+  G P KKV+IV+ G+L
Sbjct:   18 AIAANPKVFFDIVIGDEKAGRIVMELFADVVPKTAENFRQLATHEKGFGYKGSIFHRIIPQFMLQGGDITNGDGTGGKSIYGRTFADENFFRRHLGPGTLSMANAGPNTNGSQFFITTAQTPWLDGKHVVFGKVVEGLEVVKRIEEMGTQSGRPKKKVMIVNCGQL 183          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|1084875197|gb|OGR03426.1| (peptidylprolyl isomerase [Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23])

HSP 1 Score: 254.603 bits (649), Expect = 4.679e-82
Identity = 121/165 (73.33%), Postives = 137/165 (83.03%), Query Frame = 0
Query:   63 MAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGEL 227
            MAANP+V+FD+ IG EKAGRI MEL ADV PKTAENFRQ+AT E GF ++GS FHRIIP FMLQGGDIT  DGTGG+SIYGRTF DENF  KH   G LSMANAGPNTNGSQFFITTV+TPWLDG+H VFG+VTEGM+VV+K+E +GS  G P  KV IV+ G+L
Sbjct:    1 MAANPKVFFDIVIGDEKAGRIVMELFADVTPKTAENFRQLATHEKGFGFRGSIFHRIIPQFMLQGGDITNADGTGGKSIYGRTFADENFIRKHLWPGTLSMANAGPNTNGSQFFITTVKTPWLDGKHVVFGKVTEGMEVVKKIEDMGSSSGQPKVKVSIVNCGQL 165          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|1084872539|gb|OGR01111.1| (peptidylprolyl isomerase [Deltaproteobacteria bacterium RIFOXYD12_FULL_55_16])

HSP 1 Score: 251.521 bits (641), Expect = 7.228e-81
Identity = 118/165 (71.52%), Postives = 137/165 (83.03%), Query Frame = 0
Query:   64 AANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGELK 228
            AANP+V+FD+ IG EKAGRI MEL AD  PKTAENFRQ+AT E GF +K S FHRIIP FMLQGGDIT  DGTGG+SIYGRTF DENF  +H G G+LSMANAGPNTNGSQFFITTV+TPWLDG+H VFG+V EG++VV+K+E +GS  G P KKV I +SG+L+
Sbjct:    3 AANPRVFFDIVIGDEKAGRIVMELFADTVPKTAENFRQLATHEKGFGFKDSIFHRIIPQFMLQGGDITNSDGTGGKSIYGRTFADENFLHRHLGPGMLSMANAGPNTNGSQFFITTVKTPWLDGKHVVFGKVLEGLEVVKKIEELGSRSGQPRKKVTIANSGQLE 167          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|700589070|gb|AIU94796.1| (hypothetical protein [Phragmatopoma lapidosa])

HSP 1 Score: 252.292 bits (643), Expect = 7.607e-81
Identity = 115/174 (66.09%), Postives = 139/174 (79.89%), Query Frame = 0
Query:   54 RMMLSRGLAMAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGEL 227
            R +L +  +  ANP+ YFD+ IGG+ AGRI+ E+ A+V PKTAENFR + TGE GF YKGS+FHR+IP+FMLQGGD TRG+GTGG+SIYG  F DENF LKH   GLLSMANAGPNTNGSQFFITTV T WLDG+H VFG+V EGMD+V+K+EA+GS  G P +K+ I D G+L
Sbjct:   12 RKVLIKFYSTMANPRCYFDITIGGQPAGRISFEVFANVVPKTAENFRALCTGEKGFGYKGSSFHRVIPEFMLQGGDFTRGNGTGGKSIYGEKFQDENFQLKHTTPGLLSMANAGPNTNGSQFFITTVITSWLDGKHVVFGKVEEGMDIVKKIEALGSASGAPRQKITIADCGQL 185          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|1209196267|ref|WP_088254614.1| (peptidylprolyl isomerase [Fimbriiglobus ruber] >gi|1208014713|gb|OWK43811.1| Peptidyl-prolyl cis-trans isomerase [Fimbriiglobus ruber])

HSP 1 Score: 251.521 bits (641), Expect = 7.974e-81
Identity = 121/166 (72.89%), Postives = 134/166 (80.72%), Query Frame = 0
Query:   61 LAMAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGE 226
            +A   NP+V+FDV I G+ AGRI MEL ADVAPKTAENFR + TGE GF YKGS FHR+IP FMLQGGD T  +GTGG+SIYG  F DENFTLKH   GLLSMANAGPNTNGSQFFITTV+T WLDG+H VFG V EGMDVV+ VEA+GS  GTPSKKVVI D G+
Sbjct:    1 MADTTNPRVFFDVSIDGKPAGRIVMELRADVAPKTAENFRALCTGEKGFGYKGSGFHRVIPQFMLQGGDFTNHNGTGGKSIYGTKFADENFTLKHTTPGLLSMANAGPNTNGSQFFITTVKTEWLDGKHVVFGSVVEGMDVVKAVEALGSRSGTPSKKVVITDCGQ 166          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|459178903|ref|XP_004226428.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase-like [Ciona intestinalis])

HSP 1 Score: 249.595 bits (636), Expect = 3.907e-80
Identity = 117/163 (71.78%), Postives = 132/163 (80.98%), Query Frame = 0
Query:   65 ANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGEL 227
            ANP+V+FD+ IGG  AGR+ M L ADV PKT ENFR + TGE G +YKGSAFHR+IPDFM QGGD TRGDGTGG+SIYG  F DENFTLKH G G+LSMANAGP+TNGSQFF+ T +T WLDG+H VFG VTEG +VV+KVE VGS  GT SKKVVI D GEL
Sbjct:    2 ANPRVFFDITIGGSPAGRVIMTLRADVVPKTVENFRALCTGEKGISYKGSAFHRVIPDFMCQGGDFTRGDGTGGKSIYGEKFRDENFTLKHTGPGVLSMANAGPHTNGSQFFLCTAKTAWLDGKHVVFGNVTEGYEVVKKVEGVGSQSGTTSKKVVIADCGEL 164          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|557007644|ref|XP_006005099.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase A-like [Latimeria chalumnae])

HSP 1 Score: 249.595 bits (636), Expect = 1.270e-79
Identity = 115/163 (70.55%), Postives = 131/163 (80.37%), Query Frame = 0
Query:   66 NPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGELK 228
            NPQVYFDV +  +  GR+T EL ADV PKTAENFR + TGE GF YKGS FHR+IP FM QGGD T  +GTGG+SIYG TFPDENFTLKH G G+LSMANAGPNTNGSQFFI T +T WLDGRH VFG V +GMDVV+KVE++GS  G PSKK+VI D G+L+
Sbjct:   39 NPQVYFDVAVVDQPLGRVTFELNADVVPKTAENFRALCTGEKGFGYKGSIFHRVIPKFMCQGGDFTNYNGTGGKSIYGPTFPDENFTLKHTGPGVLSMANAGPNTNGSQFFICTAKTEWLDGRHVVFGHVKDGMDVVKKVESLGSQSGKPSKKIVITDCGQLE 201          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|1032643212|gb|OAQ24558.1| (peptidyl-prolyl cis-trans isomerase-like protein [Mortierella elongata AG-77])

HSP 1 Score: 247.669 bits (631), Expect = 2.636e-79
Identity = 117/165 (70.91%), Postives = 131/165 (79.39%), Query Frame = 0
Query:   63 MAANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGEL 227
            MAANP+VYFD+   G   GRI MEL ADVAPK AENFR + TGE GF Y GS+FHRIIP FMLQGGD TRG+GTGG+SIYG  F DENFTLKH G G+LSMANAGPNTNGSQFFI TV+T WLDG+HTVFG V EG+DVV ++E +GS  GTP  KV I  SG+L
Sbjct:    1 MAANPRVYFDITKDGAPMGRIVMELRADVAPKCAENFRALCTGEKGFGYAGSSFHRIIPQFMLQGGDFTRGNGTGGKSIYGEKFADENFTLKHTGPGVLSMANAGPNTNGSQFFICTVKTAWLDGKHTVFGNVVEGLDVVTEIEKLGSASGTPKAKVTIAASGQL 165          
BLAST of EWM25647.1 vs. NCBI_GenBank
Match: gi|289064181|gb|ADC80504.1| (peptidyl prolyl cis-trans isomerase A (I) [Conus novaehollandiae])

HSP 1 Score: 247.284 bits (630), Expect = 3.002e-79
Identity = 114/163 (69.94%), Postives = 131/163 (80.37%), Query Frame = 0
Query:   65 ANPQVYFDVEIGGEKAGRITMELAADVAPKTAENFRQIATGEAGFTYKGSAFHRIIPDFMLQGGDITRGDGTGGQSIYGRTFPDENFTLKHKGVGLLSMANAGPNTNGSQFFITTVETPWLDGRHTVFGRVTEGMDVVRKVEAVGSPRGTPSKKVVIVDSGEL 227
            ANPQV+FD+EIGG+  GRI MEL ADV PKTAENFR + TGE GF +KGS+FHR+IP FM QGGD TR +GTGG+SIYG  F DENF LKH G G+LSMANAGPNTNGSQFF+ T +T WLDG+H VFG V +GMDVV+ +E VGS  GT SKKVVI D G+L
Sbjct:    2 ANPQVFFDIEIGGKPVGRIVMELRADVVPKTAENFRALCTGEKGFGFKGSSFHRVIPGFMCQGGDFTRHNGTGGKSIYGNKFEDENFKLKHTGAGILSMANAGPNTNGSQFFLCTAKTQWLDGKHVVFGNVVDGMDVVKAIELVGSDSGTTSKKVVIADCGQL 164          
The following BLAST results are available for this feature:
BLAST of EWM25647.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107475|gb|EWM25647.1|0.000e+0100.00Cyclophilin-like peptidyl-prolyl cis-trans isomera... [more]
gi|1084858246|gb|OGQ88634.1|2.059e-8372.29peptidylprolyl isomerase [Deltaproteobacteria bact... [more]
gi|1084875197|gb|OGR03426.1|4.679e-8273.33peptidylprolyl isomerase [Deltaproteobacteria bact... [more]
gi|1084872539|gb|OGR01111.1|7.228e-8171.52peptidylprolyl isomerase [Deltaproteobacteria bact... [more]
gi|700589070|gb|AIU94796.1|7.607e-8166.09hypothetical protein [Phragmatopoma lapidosa][more]
gi|1209196267|ref|WP_088254614.1|7.974e-8172.89peptidylprolyl isomerase [Fimbriiglobus ruber] >gi... [more]
gi|459178903|ref|XP_004226428.1|3.907e-8071.78PREDICTED: peptidyl-prolyl cis-trans isomerase-lik... [more]
gi|557007644|ref|XP_006005099.1|1.270e-7970.55PREDICTED: peptidyl-prolyl cis-trans isomerase A-l... [more]
gi|1032643212|gb|OAQ24558.1|2.636e-7970.91peptidyl-prolyl cis-trans isomerase-like protein [... [more]
gi|289064181|gb|ADC80504.1|3.002e-7969.94peptidyl prolyl cis-trans isomerase A (I) [Conus n... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5047rna5047Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications