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Properties
| Property Name | Value |
|---|
| Product | transcription antitermination protein |
| Orig transcript id | gnl|cribi|Naga_100037g3.10731.mrna |
| Orig protein id | gnl|cribi|Naga_100037g3.10731 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:993610..995134 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5036 ID=rna5036|Name=rna5036|organism=Nannochloropsis gaditana|type=mRNA|length=1984bp
AGTAAGCCCTTGTCCTGTTTCTATAAACTCGTACGCGATGATAGAACGTG
GACGGGAATAACCAAGGGCACAAAAGGAGGCAAGTTGCAGTCCGAAGGCA
AATTGCTGCAGCCGTCCACTCGGAGAGGAAAAAGGGTTTGCTTGCGTTCA
AAGCCACTCGCAGGCCTATCCCACGCCACGATAACAATGCAACCGTATGG
TTCTCAACAAATCAGTCATTCCATTGAAATAGGGTCGGGTCGAGTTTTTA
TTCAAGTATGTGGTCAAAGACAAGGAGTGGCAATGCCTCATTCCTCTCTC
GGAACGGGCGAGCAGGGAGACTCGCCCCCTTCGGCCCTCCGCTTCGGGTG
CCACTTTCCTTTGAAAGCAGGCGTTCAACCATGGCGAATTCTCTCTCCAT
CTTAATATTGTCTGTTTTCCTCCAGTTTCTAGGTTCTAAACAGGTGAAAA
TAGTATTGCTGCAGGCCCTAACGTCCAGCTCAGCCATGCCCCCCCCTACT
CCGCCACCTCGAATTGACAACCCTTTAGCGGCCGTGGAAGAGGAATGTGA
GCATGCTGCCTGTAAATCCATGCTCGCTTTGCTAAAAAGTGCCGCCGGTA
TGTCTAAATCTGGTGCTACTTCCTCGTCTTCACCCTCCCTGGCCTCGTCC
ACCCCTTCAGCTGCCTCCTCTGACGAGGCAGCTTGGCGGAAAAACCATTG
TCCACTCGACAAAGACACGTTGGGCGACATGACATGGGGTGTGCTTCATT
CTACCGCAGCGTATTATCCCGAGTCTCCCACACCTCAGGAGCAGTCTTTG
GCTGCGGGCCTCGTCCATGGAATTGCAGGTCTGTACCCATGCACATACTG
CCGGACAGATTTCCAGGAATGCATCCAAGCACTCCCTCCCCGGGTGGAGA
GCCGCGAAGCCTTCTCAGTTTGGGTTTGCAAGCAACACAACCTCGTGAAC
GAGAAACTGGGAAAACCCGTCTTTCCCTGTGACTTGAAGAGTTTAGATCG
ACGGTGGAAGACCGGGGAGCCGCGGTGCTGGGGAGAAAAGGGAGGAGAGG
ATAACAACCACAGACAAGCGGGGGCGGACTTGACTCCTGCAGGGGCACAT
ACAAAACAACAAGAGCACATACTCTCTGCGCCATCCCCGTTGACCAGAAG
GAAAAGCAAATTTTATATCATCGAACCTGGGGTGGGGAAGAAAAAAACGG
GCCCCTAGAGGGTCTCTCATGGAACTCAACGTGTTTCAGAGTGTATGGTA
GAAGAATGCAGCTTGTAATCAAAGCATATAGTGCAAGAAATAAGTAGAAG
ACAGAAGCACGTCGCTCATGTGCAGGGATGGCGTGCTTTTTCAACCCGGT
CCTCGTTGCTCCTGCCCGTTGTGGCCAATTCATTCGCCTCGCTGGCGCAT
GAAGAACACGAGGTAGATACTCACGATTTTCTTGCACATACTGTACAATT
GTTCTCCACGCTCACAGTGGTAGCTGGACAGTCTGGTCATTCCACCACCT
TTTTAACCTCCTCAAGTGCACCCGCCAAGCCCGCCCTCCCCCCCAGAAGA
TCGGAAGCTCAAAGATCCTTGATCCACCTTGCCCTTTAAGGCTTTGGCAT
GCCCAACGGTCTCGCAGGGGACCAGAAACCGCCGCAATCCTCCGTCTACT
CCCCTCTGTACATGCAGCACCAGTCCAAGTCGCTCCTCACTTCGTGTTGG
TACCTGGAGCTCCGCGAGCACCACCTCTCTCCACGACAATGAATAATGCA
AAATTCCTTCCTCATTCAAAAATAATACGCGGGCAGTCGACAAAACAACA
ACTCCTCCCCGACTCCTTCCAATTTCTGCGTAATCACAGTACCACTCCTC
GTGTCTTGCTAGCAAGCGCTTTCCTCCTTTCCTCCTTCCCTCCCTCCCTC
GCACTCTCTCGAACAGCATTTGTGCCTGCGCATCCGCCATATCATACGGT
TTTAACCTCCTCTCTTCCCCATACACGGCCCTTT back to topprotein sequence of rna5036 >rna5036-protein ID=rna5036-protein|Name=rna5036|organism=Nannochloropsis gaditana|type=polypeptide|length=428bp
MDNHDHDRPRVSSGTLTGNRHTGGVMWLIIGLVVAGKVCCSTAFSTAFQL
PGASDPRKRVLPAGSSPRLFSLPSLHASPLTSTSGSDIFEQDGSIPSFPP
SRAATSAVDRYSVGPVDPGDDRETRPHADSISEAEIEEVARKWERRKQSR
RERITKKKGAREAMLDEAEDVIPDREVPLWYALKVKTGMEIQIRDTLGEL
ATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDL
HDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDL
EAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAVKRNKVEVRVTLPQ
SGVRKLTQEELDQEAREAGEEGRRAFDRARGGGWTGGRRSHGAIAMQWPS
QEKGGEGRWCERRRRRRRTGKDRAYTGF back to topmRNA from alignment at CM002464.1:993610..995134+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5036 ID=rna5036|Name=rna5036|organism=Nannochloropsis gaditana|type=mRNA|length=1525bp|location=Sequence derived from alignment at CM002464.1:993610..995134+ (Nannochloropsis gaditana)
ATGGATAACCACGATCATGACAGGCCACGCGTAAGCAGTGGAACGCTTAC
CGGTAATCGACATACTGGGGGGGTAATGTGGCTGATCATCGGTCTTGTCG
TGGCAGGCAAGGTGTGCTGCAGCACGGCTTTCTCGACTGCTTTTCAACTG
GTAAGTTGACGCTGCGATGCTTTAGGGAGCGCTCATTTTGGTTTTCAGCA
GATCGTAAAGCAGTACATTGTGGTACATTGTCCTGCAGCGCTATGTGTGG
TCTGGTTCACCCCTCACGTGCAGTTCGACATTCCTGCTCTATGAGAAATA
ACTCTTGTGGCAGAGCCGCTACccctgctttcttttttGATCCACTCAGC
TCTCTCGTgccacatcctcctttcttcctcaacCATAGCCTGGCGCCTCG
GATCCGCGCAAGCGCGTCCTGCCCGCTGGATCGAGTCCGCGGctattttc
cctcccctcgctccacgcctcccctttaacctccacctccggcaGCGATA
TTTTCGAACAAGACGGCTCCAtaccatcttttcctccctcccgtgccgCC
ACCTCTGCCGTGGACAGATACTCTGTGGGACCGGTTGACCCTGGCGATGA
TCGCGAGACTCGTCCCCACGCGGACAGCATATCGGAGGCGGAGATCGAGG
AAGTAGCGCGAAAATGGGAGCGTCGGAAACAAAGCCGGCGGGAGCGGATc
accaagaagaaaggggcccgggaggcgatgttggacgaggcggaggacgt
gattcCCGACCGGGAGGTGCCTTTGTGGTATGCGTTGAAAGTGAAGACGG
GCATGGAAATCCAGATCCGCGACACCTTGGGTGAGctggccaccctccct
cagtACCGGGGCCAGATTTTGGAGACTTTGGTGCCCATGGCGAAGTCGGT
CAAGTCCTTGGGGAAATCCCTTCGCCTGGTCGAACAGCCCTTGCACCGCG
GCTACGTCTTCATCCACATGGCCATGTCGCGCGACCTCCACGACGCTGTG
CTGGCTCCCAATGGCGTGGGCTGCTTCATCGGTCGGCGCgtggcggggaa
agggatcatCCCCAACCCGCTCCGGGCCAAGGAAGCAGATCGGTTGAAAG
AGCGGGCCCTGTACGAAGCCGGTCGCACCATCGACCTGGAGGCGATCCCC
TTCCGGCCCAAGGACCGGGTGGACATCCTTGTGGGAGAGTTTGCCTATGC
CCGTGGACGGGTCACGTCCGTGAAGGAGACCGAGGTGAATGTGGCTGTGA
AGCGGAACAAGGTGGAAGTGCGGGTGACGCTGCCTCAATCAGGGGTCCGG
AAGCTCACTCAGGAAGAGCTGGAtcaggaagcgagggaggccggggagga
gggacgccgGGCGTTTGACCGGGCccgcgggggggggtggacgggtggga
ggcgATCGCACGGAGCAATAGCGATGCAGTGGCCCTCtcaggagaaagga
ggggaggggaggtggtgcgagagaagaagaagaaggcgccgGACCGGAAA
GGACCGAGCTTATACCGGATTTTGA back to topCoding sequence (CDS) from alignment at CM002464.1:993610..995134+ >rna5036 ID=rna5036|Name=rna5036|organism=Nannochloropsis gaditana|type=CDS|length=2574bp|location=Sequence derived from alignment at CM002464.1:993610..995134+ (Nannochloropsis gaditana)
ATGGATAACCACGATCATGACAGGCCACGCGTAAGCAGTGGAACGCTTAC
CGGTAATCGACATACTGGGGGGGTAATGTGGCTGATCATCGGTCTTGTCG
TGGCAGGCAAGGTGTGCTGCAGCACGGCTTTCTCGACTGCTTTTCAACTG
CCTGGCGCCTCGGATCCGCGCAAGCGCGTCCTGCCCGCTGGATCGAGTCC
GCGGctattttccctcccctcgctccacgcctcccctttaacctccacct
ccggcaGCGATATTTTCGAACAAGACGGCTCCAtaccatcttttcctccc
tcccgtgccgCCACCTCTGCCGTGGACAGATACTCTGTGGGACCGGTTGA
CCCTGGCGATGATCGCGAGACTCGTCCCCACGCGGACAGCATATCGGAGG
CGGAGATCGAGGAAGTAGCGCGAAAATGGGAGCGTCGGAAACAAAGCCGG
CGGGAGCGGATcaccaagaagaaaggggcccgggaggcgatgttggacga
ggcggaggacgtgattcCCGACCGGGAGGTGCCTTTGTGGTATGCGTTGA
AAGTGAAGACGGGCATGGAAATCCAGATCCGCGACACCTTGGGTGAGctg
gccaccctccctcagtACCGGGGCCAGATTTTGGAGACTTTGGTGCCCAT
GGCGAAGTCGGTCAAGTCCTTGGGGAAATCCCTTCGCCTGGTCGAACAGC
CCTTGCACCGCGGCTACGTCTTCATCCACATGGCCATGTCGCGCGACCTC
CACGACGCTGTGCTGGCTCCCAATGGCGTGGGCTGCTTCATCGGTCGGCG
CgtggcggggaaagggatcatCCCCAACCCGCTCCGGGCCAAGGAAGCAG
ATCGGTTGAAAGAGCGGGCCCTGTACGAAGCCGGTCGCACCATCGACCTG
GAGGCGATCCCCTTCCGGCCCAAGGACCGGGTGGACATCCTTGTGGGAGA
GTTTGCCTATGCCCGTGGACGGGTCACGTCCGTGAAGGAGACCGAGGTGA
ATGTGGCTGTGAAGCGGAACAAGGTGGAAGTGCGGGTGACGCTGCCTCAA
TCAGGGGTCCGGAAGCTCACTCAGGAAGAGCTGGAtcaggaagcgaggga
ggccggggaggagggacgccgGGCGTTTGACCGGGCccgcgggggggggt
ggacgggtgggaggcgATCGCACGGAGCAATAGCGATGCAGTGGCCCTCt
caggagaaaggaggggaggggaggtggtgcgagagaagaagaagaaggcg
ccgGACCGGAAAGGACCGAGCTTATACCGGATTTTGAATGGATAACCACG
ATCATGACAGGCCACGCGTAAGCAGTGGAACGCTTACCGGTAATCGACAT
ACTGGGGGGGTAATGTGGCTGATCATCGGTCTTGTCGTGGCAGGCAAGGT
GTGCTGCAGCACGGCTTTCTCGACTGCTTTTCAACTGCCTGGCGCCTCGG
ATCCGCGCAAGCGCGTCCTGCCCGCTGGATCGAGTCCGCGGctattttcc
ctcccctcgctccacgcctcccctttaacctccacctccggcaGCGATAT
TTTCGAACAAGACGGCTCCAtaccatcttttcctccctcccgtgccgCCA
CCTCTGCCGTGGACAGATACTCTGTGGGACCGGTTGACCCTGGCGATGAT
CGCGAGACTCGTCCCCACGCGGACAGCATATCGGAGGCGGAGATCGAGGA
AGTAGCGCGAAAATGGGAGCGTCGGAAACAAAGCCGGCGGGAGCGGATca
ccaagaagaaaggggcccgggaggcgatgttggacgaggcggaggacgtg
attcCCGACCGGGAGGTGCCTTTGTGGTATGCGTTGAAAGTGAAGACGGG
CATGGAAATCCAGATCCGCGACACCTTGGGTGAGctggccaccctccctc
agtACCGGGGCCAGATTTTGGAGACTTTGGTGCCCATGGCGAAGTCGGTC
AAGTCCTTGGGGAAATCCCTTCGCCTGGTCGAACAGCCCTTGCACCGCGG
CTACGTCTTCATCCACATGGCCATGTCGCGCGACCTCCACGACGCTGTGC
TGGCTCCCAATGGCGTGGGCTGCTTCATCGGTCGGCGCgtggcggggaaa
gggatcatCCCCAACCCGCTCCGGGCCAAGGAAGCAGATCGGTTGAAAGA
GCGGGCCCTGTACGAAGCCGGTCGCACCATCGACCTGGAGGCGATCCCCT
TCCGGCCCAAGGACCGGGTGGACATCCTTGTGGGAGAGTTTGCCTATGCC
CGTGGACGGGTCACGTCCGTGAAGGAGACCGAGGTGAATGTGGCTGTGAA
GCGGAACAAGGTGGAAGTGCGGGTGACGCTGCCTCAATCAGGGGTCCGGA
AGCTCACTCAGGAAGAGCTGGAtcaggaagcgagggaggccggggaggag
ggacgccgGGCGTTTGACCGGGCccgcgggggggggtggacgggtgggag
gcgATCGCACGGAGCAATAGCGATGCAGTGGCCCTCtcaggagaaaggag
gggaggggaggtggtgcgagagaagaagaagaaggcgccgGACCGGAAAG
GACCGAGCTTATACCGGATTTTGA back to top
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