EWM25642.1, cds5024 (CDS) Nannochloropsis gaditana

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|585107470|gb|EWM25642.1| (transcription antitermination protein [Nannochloropsis gaditana])

HSP 1 Score: 868.611 bits (2243), Expect = 0.000e+0
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0

Query:    1 MDNHDHDRPRVSSGTLTGNRHTGGVMWLIIGLVVAGKVCCSTAFSTAFQLPGASDPRKRVLPAGSSPRLFSLPSLHASPLTSTSGSDIFEQDGSIPSFPPSRAATSAVDRYSVGPVDPGDDRETRPHADSISEAEIEEVARKWERRKQSRRERITKKKGAREAMLDEAEDVIPDREVPLWYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAVKRNKVEVRVTLPQSGVRKLTQEELDQEAREAGEEGRRAFDRARGGGWTGGRRSHGAIAMQWPSQEKGGEGRWCERRRRRRRTGKDRAYTGF 428
            MDNHDHDRPRVSSGTLTGNRHTGGVMWLIIGLVVAGKVCCSTAFSTAFQLPGASDPRKRVLPAGSSPRLFSLPSLHASPLTSTSGSDIFEQDGSIPSFPPSRAATSAVDRYSVGPVDPGDDRETRPHADSISEAEIEEVARKWERRKQSRRERITKKKGAREAMLDEAEDVIPDREVPLWYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAVKRNKVEVRVTLPQSGVRKLTQEELDQEAREAGEEGRRAFDRARGGGWTGGRRSHGAIAMQWPSQEKGGEGRWCERRRRRRRTGKDRAYTGF
Sbjct:    1 MDNHDHDRPRVSSGTLTGNRHTGGVMWLIIGLVVAGKVCCSTAFSTAFQLPGASDPRKRVLPAGSSPRLFSLPSLHASPLTSTSGSDIFEQDGSIPSFPPSRAATSAVDRYSVGPVDPGDDRETRPHADSISEAEIEEVARKWERRKQSRRERITKKKGAREAMLDEAEDVIPDREVPLWYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAVKRNKVEVRVTLPQSGVRKLTQEELDQEAREAGEEGRRAFDRARGGGWTGGRRSHGAIAMQWPSQEKGGEGRWCERRRRRRRTGKDRAYTGF 428          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|298704929|emb|CBJ28432.1| (putative transcription antitermination protein [Ectocarpus siliculosus])

HSP 1 Score: 70.0922 bits (170), Expect = 3.325e-9
Identity = 59/209 (28.23%), Postives = 100/209 (47.85%), Query Frame = 0

Query:  172 IPDREVPLWYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGR-RVAGKGIIPNPLRAKEADRLK--ERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAVKRNKVEVRVTLPQSGVRKLTQEELDQEAREAGEEGRRAFD 377
            +P  E   WY L+     E++ R+++           ++ E  VP  +  K +G  +   E+P+++GY++  + MS ++ D V   + +  F+G  R   K +IP  +  ++ + +K  E+AL  A +   L  +     D V+I  G FA  +G V+ +K+ E  V V        V L   GVRKLT+ E++       EE RRA D
Sbjct:  214 VPTDEEFHWYLLRCFATYEVRCRNSVESYLEGAGLGDRVEEIWVPCRQVPKQVGTKVTFKEEPIYQGYIYCKVKMSLEVRDIVNDMDRIVGFVGEARDEDKKLIPERMEPEDIEGIKASEKALG-ANKIPQLLGV----GDLVEISEGPFALKKGEVSKIKDGEYVVKVNTFGRNSDVRLDWDGVRKLTELEVETWF----EETRRAMD 413          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|491798708|ref|WP_005605746.1| (transcription termination/antitermination protein NusG [Actinobacillus pleuropneumoniae] >gi|306856953|gb|EFM89084.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 4 str. M62])

HSP 1 Score: 65.0846 bits (157), Expect = 1.041e-8
Identity = 49/149 (32.89%), Postives = 68/149 (45.64%), Query Frame = 0

Query:  180 WYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSV 328
            WY L+  +G E ++  TL E   L Q   Q  E LVP  + V+S+G   R  E+    GYV + M M+ D    V +   V  FIG    G    P P+  +EADR+  R    A +    +   F+P + V +  G FA   G V  V
Sbjct:   14 WYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFPGYVLVQMEMNDDTWHLVKSVPRVMGFIG----GTADKPAPISKREADRILNRVQETAEKPRHRKE--FQPGENVHVTEGPFADFTGTVEEV 156          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|1015452425|gb|AMV34208.1| (hypothetical protein VN12_18910 [Pirellula sp. SH-Sr6A])

HSP 1 Score: 64.6994 bits (156), Expect = 1.106e-8
Identity = 56/164 (34.15%), Postives = 76/164 (46.34%), Query Frame = 0

Query:  180 WYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSL--GKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGR-TIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAVKRN 340
            WY LKV+   E  IR+ L +   L   +    E LVP    V+    GK  R+V++ L+ GY+ I M ++ D    V    GVG F G   AGK   P P+   + DR+ + A  +A        AIPF+P DRV +  G F    G V  + E    V V  N
Sbjct:    3 WYILKVQFNREDTIREALEKRIRLSNMQTSFGEILVPTEDVVEFTRAGKR-RVVKRKLYPGYLVIRMIINDDTWFLVRETTGVGDFTGS--AGK---PTPMSDADVDRILKLAYPDADEEQAPKTAIPFKPGDRVRVKEGNFQSLEGDVDRIDEANGRVTVIIN 160          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|491787309|ref|WP_005599210.1| (transcription termination/antitermination protein NusG [Actinobacillus pleuropneumoniae] >gi|189916177|gb|ACE62429.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 7 str. AP76] >gi|302647813|gb|EFL78020.1| transcription antitermination protein NusG [Actinobacillus pleuropneumoniae serovar 2 str. 4226] >gi|302651022|gb|EFL81176.1| transcription antitermination protein NusG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] >gi|306852515|gb|EFM84749.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 1 str. 4074] >gi|306854697|gb|EFM86887.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 2 str. S1536] >gi|306859068|gb|EFM91110.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 6 str. Femo] >gi|306861477|gb|EFM93466.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] >gi|306863710|gb|EFM95636.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 10 str. D13039] >gi|306865915|gb|EFM97791.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 11 str. 56153] >gi|306868082|gb|EFM99908.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 12 str. 1096] >gi|306870225|gb|EFN01983.1| Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 13 str. N273] >gi|746698116|gb|KIE88886.1| putative transcription antitermination protein nusG [Actinobacillus pleuropneumoniae] >gi|746698173|gb|KIE88942.1| putative transcription antitermination protein nusG [Actinobacillus pleuropneumoniae] >gi|746698252|gb|KIE89020.1| putative transcription antitermination protein nusG [Actinobacillus pleuropneumoniae] >gi|746703861|gb|KIE94482.1| putative transcription antitermination protein nusG [Actinobacillus pleuropneumoniae] >gi|746704795|gb|KIE95388.1| putative transcription antitermination protein nusG [Actinobacillus pleuropneumoniae] >gi|746705104|gb|KIE95691.1| putative transcription antitermination protein nusG [Actinobacillus pleuropneumoniae] >gi|953947868|emb|CUU53140.1| transcription antitermination protein [Actinobacillus pleuropneumoniae serovar 8])

HSP 1 Score: 64.6994 bits (156), Expect = 1.570e-8
Identity = 49/149 (32.89%), Postives = 68/149 (45.64%), Query Frame = 0

Query:  180 WYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSV 328
            WY L+  +G E ++  TL E   L Q   Q  E LVP  + V+S+G   R  E+    GYV + M M+ D    V +   V  FIG    G    P P+  +EADR+  R    A +    +   F+P + V +  G FA   G V  V
Sbjct:   14 WYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFPGYVLVQMEMNDDTWHLVKSVPRVMGFIG----GTADKPAPISKREADRILNRVQETAEKPRHRKE--FQPGENVRVTEGPFADFTGTVEEV 156          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|126097973|gb|ABN74801.1| (Transcription antitermination protein nusG [Actinobacillus pleuropneumoniae serovar 5b str. L20] >gi|165877254|gb|ABY70302.1| transcription antitermination protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03])

HSP 1 Score: 64.3142 bits (155), Expect = 1.608e-8
Identity = 49/149 (32.89%), Postives = 68/149 (45.64%), Query Frame = 0

Query:  180 WYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSV 328
            WY L+  +G E ++  TL E   L Q   Q  E LVP  + V+S+G   R  E+    GYV + M M+ D    V +   V  FIG    G    P P+  +EADR+  R    A +    +   F+P + V +  G FA   G V  V
Sbjct:    3 WYVLQAFSGFENRVAVTLREYIKLHQMEDQFGEVLVPTEEVVESVGGRRRRTERKFFPGYVLVQMEMNDDTWHLVKSVPRVMGFIG----GTADKPAPISKREADRILNRVQETAEKPRHRKE--FQPGENVRVTEGPFADFTGTVEEV 145          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|846776506|gb|KMK52555.1| (transcription antiterminator NusG [[Actinobacillus] muris])

HSP 1 Score: 63.1586 bits (152), Expect = 4.356e-8
Identity = 46/149 (30.87%), Postives = 69/149 (46.31%), Query Frame = 0

Query:  180 WYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSV 328
            WY L+  +G E ++  TL E   L   + Q  E LVP  + V+++G+  R  E+    GYV + M M+ D    V +   V  FIG    G    P P+  +EADR+  R    + +    +   F+P + V +  G FA   G V  V
Sbjct:    3 WYVLQAFSGFEARVAMTLREYIKLHNMQDQFGEVLVPTEEVVENVGRKRRKTERKFFPGYVLVQMEMNDDTWHLVKSVPRVMGFIG----GTADKPAPISQREADRILNRVQETSEKPRHRKE--FQPGEEVRVTEGPFADFTGTVEDV 145          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|653210856|ref|WP_027425279.1| (transcription termination/antitermination protein NusG [Lachnospiraceae bacterium NC2004])

HSP 1 Score: 62.7734 bits (151), Expect = 4.484e-8
Identity = 46/181 (25.41%), Postives = 89/181 (49.17%), Query Frame = 0

Query:  180 WYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGR-TIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKET--EVNVAVKRNKVEVRVTLPQSGVRKLT 357
            WY     +G E +++ T+ +     + + QILE +VPM   +++ G   + V++ L  GYV +HM M+ D    V    GV  F+     G G  P PL     D ++   + ++ + T+D+        DR+ ++ G +A     VT+V E   ++++ ++    ++ V +  S ++KL+
Sbjct:    7 WYVAHTYSGYENKVKTTIEKTVENRKLQDQILEVMVPMQTVIETKGDKRKEVQRKLFPGYVMVHMVMNDDTWYVVRNTRGVTGFV-----GPGSNPVPLT---EDEIRNMGILQSKKATLDINV-----GDRIRVVSGPWADTESVVTNVNEQKEKISIDIEMQGRDISVEIDFSDIQKLS 174          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|1176767464|gb|OQY85437.1| (transcription termination/antitermination protein NusG [Anaerolineae bacterium UTCFX3])

HSP 1 Score: 63.1586 bits (152), Expect = 5.046e-8
Identity = 47/171 (27.49%), Postives = 78/171 (45.61%), Query Frame = 0

Query:  178 PLWYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAVKRNKVEVRVTL 348
            P WY +   +G E ++R  L +       + +I + ++P  + ++      R VE+ +  GYV I+MA+S +    V    GV  F+     G G  P PLR +E +++ +R   EA        + F+  +RV I+ G F   RG V  +        ++R KV V V  
Sbjct:   21 PAWYVIHCYSGYENKVRHNLEQRIETMNMKDKIFDVVIPTQEEIEVRDGKRRTVERHIFPGYVLINMALSEESWYVVRNTPGVTGFV-----GMGNSPTPLRPEEVNQIIKRMEAEAPTV----KVTFKVGERVRIIDGPFNDFRGNVAEID-------MERTKVRVMVNF 175          

BLAST of EWM25642.1 vs. NCBI_GenBank
Match: gi|499336143|ref|WP_011026217.1| (transcription termination/antitermination protein NusG [Caldanaerobacter subterraneus] >gi|20517125|gb|AAM25279.1| Transcription antiterminator [Caldanaerobacter subterraneus subsp. tengcongensis MB4])

HSP 1 Score: 62.7734 bits (151), Expect = 5.120e-8
Identity = 44/173 (25.43%), Postives = 81/173 (46.82%), Query Frame = 0

Query:  165 LDEAEDVIPDREVPLWYALKVKTGMEIQIRDTLGELATLPQYRGQILETLVPMAKSVKSLGKSLRLVEQPLHRGYVFIHMAMSRDLHDAVLAPNGVGCFIGRRVAGKGIIPNPLRAKEADRLKERALYEAGRTIDLEAIPFRPKDRVDILVGEFAYARGRVTSVKETEVNVAV 337
            + E +++   +E PLWY +      E ++ + +  LA   +Y G I++  VP+ K   S    ++ +E+ +  GYVF+   M+ ++  A+   NGV  F+     G G  P P+  +E  R          R  D  +  F+  D V I  G F    G++  ++  ++N+A+
Sbjct:    1 MSEVQELTKTKEKPLWYVVFTYHNAEKRVEEHINSLAKTEKYDGLIIKAEVPVQKRTVSRRGKIKEIEEKIFPGYVFVKAVMTPEVMAAIRRINGVAHFV-----GGGNEPVPITPEEVKR---------ARIQDDLSEEFKAGDTVMITDGPFENFIGKIIKIEGRKINIAL 159