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Properties
| Property Name | Value |
|---|
| Product | ring u-box domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_101014g1.2731.mrna |
| Orig protein id | gnl|cribi|Naga_101014g1.2731 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:948584..949869 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5022 ID=rna5022|Name=rna5022|organism=Nannochloropsis gaditana|type=mRNA|length=1676bp
TGAGTGCAGATTATGCCCATCTACGAAATACAGCCAACCTCCTGCCTCCT
GTGTGCACCGAGTGTAAGAAAGCCATGAGCCCATCTCTCATACACAATAT
GTTCCTTCAGGTCCATTCCCATGGCAGATCTTCCTCCTGTAAGAAGAAGA
TGGGCACTTCTGCGACGAGCCGTCCGTACTGCATCCAGTAAAGCCCCTTT
GTCCTCCCCTGTCCCATCTCCACCCTCGCCTCACCTGCCCTCCCGACGGG
ACGAATTTGAAACGTACACAGTACCCTCACCATGCGCGTGTTTTGCCGAC
ATGACACTCTCCATCCCCCTTATACGCCCTCATTGCTCCAAGCGCTCTAC
GTCATGGGCAGCTCTGGTATCGCATCGTCCTGAGTATGCTGGAGTGGATA
ACACAGGCAACGTCTTAATTTGGCCGGCGGAGAAAGCCTTAATGTCTCTA
CTGCTGTCAGAATGTAAGTGTTGAAGCGGAGCGTGTCAGCACGTCCACTT
GCTTTGTGTGGACGGTGCTGGATCAACAAAAGAGGCGGCCCAAGGTTCAT
CTGAATTCGTGTCCTCCTGTGTCGATTCTCTTCCCCCAGACCACGTCGGG
GATTGACGGGGAATATCCCTTCCCCTTCCACGGTGTAGAATGTTCACTCC
ACCGTGCACGCAGTCCGACACCACAGGTTTCCCGACTCGCACACGCCCCA
GCGCGTCCTCGAAGTCGGCGCCGGGTGCTCGGGGCTGGCAGGCATGGGGC
TAGCTTTGTTGTGGACCGACAGCCACAACCGTTCCCAACATTCCCCACGA
AAGTCCTGTGGAGGTTGCCCTTCGACCGTTGACGTTAGGGCAGCTGCCTT
GACAACGTCGCCGCCCGGGCCTGAAGCAAGTAGTAGTTCCTCCTCTTCTT
CCTCCCTTCCCTCCCTCCCGCCCTGCCCTCCGCCCTCCTTCCCGCCCCCC
TACACGGTCTGCCTCACCGACGGCCATTCGGCTTGCGTTTCTTCCCTCCG
TCGATGCCTGGAACGCAACCAAGCGAGCTTTTCCCCCCACATCTCCGTCC
AAGCGCATCAGCTCTTGTGGACCGACACCATTGGTTCCCCTCCGAACCTT
CTAGAAGGTCACAAGCCGGCGTCCTTCGACCTCATCGTGGGAGCGGACGT
GCTGTTTTTCGAACGCTTCCATGACGCCTTGCTAAAGACATTGTCCGTGT
ATCTAAACCCGGCGGGGGGCGAGGTGTGGCTCCTTCAGCCTTCTCGAGGG
GGGTCTCTGGAGAGGTTCGTGAGCCGGTCCCAGGAACAAGGCGGGTGGGA
GGCCTCCCACACGAATGTGGTAGGACACCGGCACAGCCCCGACACGGACG
CCCTGGTCCTACTCAAGCTCCGACGACGTCAGGGTTCTCCGTGATACCCA
AAATGCCAGCGGGCGGGGGCTGGAGAGGAAGCAGGGCGCCCAGTAGGTGA
TGAATAGGCCGTCGCGAAACGCGCTACCGAGAGAAGAATGATCCTTCATT
TGTCCCGCCTTGCTATAGAGAAAGCACTCGCCGCCTTTGGGTGGGATTGC
TCCTGGCTTCCAGGACCTTTCCCTTCCTGTCGTGTCTCCTCCTCGTGTGA
GAAAAAATTTTAAAAAAGACATGTAGCGGCAAGTCCCCCCCAAAAAAAAC
CGACTTTTTTTTTTTTTTTTTTCCCT back to topprotein sequence of rna5022 >rna5022-protein ID=rna5022-protein|Name=rna5022|organism=Nannochloropsis gaditana|type=polypeptide|length=194bp
ARTLSAFHHLLPLLQPFRLPLLRAGQAALLLALWLLLLPLLVGLLFELAV
ILPARVPVDETPLIPLYEAWVLGLVFLKISVRCLLLGLLGNDHPWKRKFE
RVGANGFWNLDFTWTLRHVVLPVLCLFLSLLLPPYFFSKSVERLGYLYLR
HVVLPAPSPPPFPASSPASSFASWLLPGMRKNRSGMPMSASSFT back to topmRNA from alignment at CM002464.1:948584..949869- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5022 ID=rna5022|Name=rna5022|organism=Nannochloropsis gaditana|type=mRNA|length=1286bp|location=Sequence derived from alignment at CM002464.1:948584..949869- (Nannochloropsis gaditana)
GCCCGTACCCTCTCCGCCTTCCATCACCTCCTCCCCCTCCTTCAGCCCTT
CCGCTTGCCCCTCCTCCGGGCTGGCCAAGCCGCCCTCCTCCTCGCCCTCT
GGCTCCTCCTCCTCCCCCTCCTGGTCGGCCTCCTCTTCGAGCTCGCCGTC
ATCCTCCCCGCCCGCGTGCCCGTGGACGAGACGCCTTTGATCCCCCTCTA
CGAGGCCTGGGTGTTGGGGCTGGTGTTTTTGAAAATATCGGTCCGCTGCC
TCCTGCTTGGCCTGCTCGGCAACGACCACCCCTGGAAACGGAAATTTGAA
CGCGTCGGGGCCAACGGTTTTTGGAACTTGGACTTTACCTGGACCTTACG
CCACGTCGTCCTCCCCGTCCTTTGCCTCTTCCTCTCCCTCCTCCTTCCTC
CCTACTTCTTCAGCAAGAGTGTGGAGAGGCTCGGTTACCTCTACCTGCGG
CACGTGGTGCTTCCCGCCCCCTCCCCCCCGCCCTTCCCCGCTTCCTCCCC
CGCTTCCTCCTTCGCTTCCTGGCTCCTGCCTGGCATGCGCAAGAACAGGA
GCGGGATGCCTATGTCAGCCTCGTCCTTTACATGATCGCAGGGTTGAAGC
GGATGGTGTATGTGGCCTACCTCCTCTGGCGACTGAGCGTGTATGGTGCC
CGGGGGCTCCACTCGGGCTTTCGGCATTTGCACGACAAACTCCGAGACGA
CGTGTACCTGGTCGGTGTGGAGTTAAGGAACCATTACGGGCAAGAGGAAA
GGATGGGGGGGCGAGGAGGGGGAGAGGGGCAAAAGATGGAATGAAGAAGC
GCTTGGGCGGATCGGATCGGGACGCGCCGGCTGGGGCAGACGGGAAAGGG
AGGAAGAGGATGGGAACGAGGGAGGGAGAGAAGGAGGGAGGGAGGGAGGC
ACAAAAGGAGGAAAAGAGTGTCTAGTCGCCACGTGTGTGACAGGATCTAT
ACAGCCGGCCTTTAGTGGGCGGAAAGGCTTCTCAGGGCGTCTCTTGAGTG
ATGGGAACGGGACTAGGATAAAGAGACGAGGTTGAGAATCGTTGTAACGA
AGGACGCAGGGGTGTGCAGGAAATCACTTGAGATGACGGCCCATACAGAT
TCCTAACACTTCATACCGTGTATGGACGGAGGAGGAGCGCACAGGCACAG
GGAAAAAAAAAAAAAAAAAAGTCGGTTTTTTTTGGGGGGGACTTGCCGCT
ACATGTCTTTTTTAAAATTTTTTCTCACACGAGGAGGAGACACGACAGGA
AGGGAAAGGTCCTGGAAGCCAGGAGCAATCCCACCC back to topCoding sequence (CDS) from alignment at CM002464.1:948584..949869- >rna5022 ID=rna5022|Name=rna5022|organism=Nannochloropsis gaditana|type=CDS|length=585bp|location=Sequence derived from alignment at CM002464.1:948584..949869- (Nannochloropsis gaditana)
GCCCGTACCCTCTCCGCCTTCCATCACCTCCTCCCCCTCCTTCAGCCCTT
CCGCTTGCCCCTCCTCCGGGCTGGCCAAGCCGCCCTCCTCCTCGCCCTCT
GGCTCCTCCTCCTCCCCCTCCTGGTCGGCCTCCTCTTCGAGCTCGCCGTC
ATCCTCCCCGCCCGCGTGCCCGTGGACGAGACGCCTTTGATCCCCCTCTA
CGAGGCCTGGGTGTTGGGGCTGGTGTTTTTGAAAATATCGGTCCGCTGCC
TCCTGCTTGGCCTGCTCGGCAACGACCACCCCTGGAAACGGAAATTTGAA
CGCGTCGGGGCCAACGGTTTTTGGAACTTGGACTTTACCTGGACCTTACG
CCACGTCGTCCTCCCCGTCCTTTGCCTCTTCCTCTCCCTCCTCCTTCCTC
CCTACTTCTTCAGCAAGAGTGTGGAGAGGCTCGGTTACCTCTACCTGCGG
CACGTGGTGCTTCCCGCCCCCTCCCCCCCGCCCTTCCCCGCTTCCTCCCC
CGCTTCCTCCTTCGCTTCCTGGCTCCTGCCTGGCATGCGCAAGAACAGGA
GCGGGATGCCTATGTCAGCCTCGTCCTTTACATGA back to top
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