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Properties
Property Name | Value |
Product | SANT/Myb domain protein |
Orig transcript id | gnl|cribi|Naga_100355g5.9418.mrna |
Orig protein id | gnl|cribi|Naga_100355g5.9418 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002464.1 | supercontig | CM002464.1:937703..939823 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5016 ID=rna5016|Name=rna5016|organism=Nannochloropsis gaditana|type=mRNA|length=2429bp GCACGAATCACCGCATTTTAAACCCGCGAACAACCCGCACACAAAAAAGT ATACGCGATAAGCTGACACCCAAAAAACCTTCGGAAAGCCGCCTTCCGTC CGTGAAGACCCATTACGTGGCGTCTCCTGCGTGAATCACAGCCGAGGTGC ATGGAGCACATCCCGTGCGGTTGTTCGCGGGCGTGGGTACTTGTTTTGTG GGCAGCCTTTTCCCCTCCTGCAGTTTGCGCAAGGGAAGACTCTCCGGTTC CCTCATGAGCCCAATGTCACACAAGGCCTTCCATTCAAAACACAAACAAC ACCATTTCGCAAATCATGCCTCCATACAACTGATTGAAACACTCGCAATC TCGCATGAAAATGCTTGAACACCCTTTTGCTCGTTTACAGGCAGCCTGGG CTTCAAACCCTGAACTGCTCGTCGTATTCCTTTACACCCTCCTGCGCGGA TCCCTTCATTGTTTTTCCGGGCTCAGCAACACACCACGTACCTCGAACAA GTTTTCGATTATCATGGGTGAATCCAAGGGTGGGAACGTTAACATGCAGC TGGACCGGTACCTCCGTCTTCTGAGCAAACACAGACAAAGTCCTGCCCTG GCTTGGGTCGGTTTCCTTCTCCTTTCCTTGGTGGTGTGGAAGCTAGTAAG CGACGGCGATTTCTCCTTCATCATGACCTACGGAGCTTTTGCCCGCACCT TTGGCTTTGGGCTCTTGGCCGTGAAATTGTGGACCGCGCGGAGTGCGACG GGGGTGTCGTTTAAAACCTTGCAGCTTTATGCGCTGGTGTTCTTCTTCCG CCTCACCTCCATCATCCCCTTCTCCGGATACCTTCCCTACGACAAGAGCG GCGACTGGTTTTATCACTTTGTGGAATCCCTCTCCCTCTTCCTGGTCCTC GTCTCCATGTACCTGGTCAAGGTCCGCTTTCCCCATTCCTACGATGAGCG CACGGATTCGTTTGGGAATCTGCACGTTCCTGCCTCCTTTGGCGCCCTGG TGTACCTAGCTGTGCCTTGCCTTGCCCTGGCCGTCTTGTTCCACCCTGGC CTCAACTCTCACTTTTTGGCGGACACGACCTGGGCCTTCTCCATGTATCT AGAGTCGGTCGCGATGCTCCCCCAGCTTTACATGTTCCAAAAACAGTCCT CTCAAGTTGTGGAGGTCCTAATCGGTCATTGGGTCTTCGCCTCAGGCTTC GCGCGAGTACTAGACATGATCTTCTGGATGTCGTCTTACCACGAGCTTGT CGATCACAGCGGATCCAAAATGGTCGGCGTCTTCGTCCTCCTTACCCAAT TCATCCACATCATCCTCATGGTCGACTTCTTCTACTATTACCTGATCAGC GTCAGAAGCGGCCTACCCCTCCAGCTGCCCCGAGCCGGAGGGCTTGTGTA GAGGGAGGATGAAAGTAGCTGTAGAGTGAGAAGGAGACAGGGACGGAGGA ACGAGCGGGGGACACATCTGGGGCGAAGGGAGGATCATTTCCTCTTCGTC GAAGGGGGAAGAGAGGGAAGGAGGGGAAGAAGCAGAGGGGGTGGATGACG GGCAAAGGCAGGAGCAAGCCAGATAGTCAGGGAGTACCATATATTAACGC GCCTCCACCGAAGGGAAAGTTCCTTAAAATTGTGTGGAGCGCAGGAGGGG AAGATGGGGTGCTCGGAAGAGAAGCAGAAGACGGTCCGTAAGAAACCTTA GAGTGTGCCCCATGGATTGATGTGATTTTTTTCCTTCTTTTTCTCCTCAA TGATAGCCGTGTTCCGTCACTCTTTTTCTTTCTCAGTTTCTGCATATGCA TTGCGAACGCGGACGAAAAGATACATGCGCGTGCAATAGCATCCCAAAAC CTTTGTTAAGGGAACGTTGGGGGAAACTGGAAGCATTTTTGATAACCGTC CGAGGCACGTAAATCGCATCTTGCACTCGCTTGGCAGGCGTGGTTCCTCT GATGTTGAACACCAATAATTCCAGAAGGATGGCACTTGTAACCCTGTGTA GATGTGGTTTTCCCCCTCGTGTGCCTAATCCTATCGAAAAGTGAAAAATG TCGGGTCCCTACGAGTTGCACGAAAACCAGACATACGTAAAGAATGGATG CAACACAATGAGCTCTCACATCCGACCTTGTACATACAATAAGGCATTCA TAATGGCTGTGCGAAGGGGCATTTTCTGATTTAAGGAAATTTTCATGAAT TTTGCAGGCAGAGACCAGTCAAATTCCAGGCTTTATAGGCATGATATTTA GCATTATTTTTTCCTCGTACAGGGTGGGGAGGCGAAAATTGACTTGGTTC ACATTTGACAATTTGTCTTTGCCCACCTGTGAGCAAAATGAAATTTCCTG TCGTAAAACAATTTTTAAACAGCGGTGTATGAACTTCAGCGTCAAAGGAT GCGGTAAAATACATGTTAGATCCTGCTTC back to topprotein sequence of rna5016 >rna5016-protein ID=rna5016-protein|Name=rna5016|organism=Nannochloropsis gaditana|type=polypeptide|length=451bp MVACAGELEGCCDSLSASEYLTEDKIHDAGDEETPRPNVYYYDAHFLLHS AETLVSVVARAADGTAGHIGNKRRGRRTCSKPKTHNGRWTNEEHVLFLQG LDAHGKDWKQIHKKLTTRSLGQIRSHAQKYFQKVEQAKRSGRLGDGDFQL LMDGKRMVFSRGGRRPTASDLEGDHLHQDEESSLAEHQTDGSFDGLPQNM HNPVPFLEPHYRHQQQQHQYPNHWQQQQCPSSPSSTCCTPRGGVWRTMAG KGWLPDTCPVSSIEEEIDAVVKSELEHVGVSWGGREGGAREERNEDEVED ALAMDFLRATSHLFPLEELRSFVTGVASDVGSHREDGTCPAPHAMAMDEL VGHSPGPTVPAGCCTGNNGNVQGANWAWTGTGASVPADTDPLTVGPLMSS CAVASDDASHRGKSESFLRPFKSGCWVKVSSLVVGRNTNRRDATDLNRTF K back to topmRNA from alignment at CM002464.1:937703..939823- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5016 ID=rna5016|Name=rna5016|organism=Nannochloropsis gaditana|type=mRNA|length=2121bp|location=Sequence derived from alignment at CM002464.1:937703..939823- (Nannochloropsis gaditana) ATGGTGGCCTGTGCTGGGGAGCTCGAAGGATGCTGCGATAGCCTCAGCGC
CTCAGAGTACCTGACAGAGGACAAAATCCATGATGCCGGAGATGAAGAAA
CGCCAAGACCAAATGTTTACTACTACGATGCTCACTTCTTGTTGCACTCA
GCCGAAACACTGGTGTCTGTAGTGGCACGTGCTGCAGATGGCACTGCGGG
TCACATTGGTAACAAACGACGTGGTAGAAGGACGTGTAGCAAGCCGAAGA
CTCACAACGGTAAGCGCATACATAAGTTAAAGATGCAACGTACAGAAATA
CGAAATGGTTTTCGCAGCAGGATTGTACGTGTCACTCTACAAGATGTGTA
CGTGTAGCTACGAGGCGAAGGCGGCGTTGAAGTGCAATCCTGTATAAGTT
TTTTTTTCACTCGCTTCCAGTGGCGATAGCGTAGTCCCCCCGCGAGCACT
TGTCGATAACTCCACATCACCTCTGCGCTTTCTTAGCTCAATCCAGCAAC
CCTGTAACCCCTCCCTTCCTTTTGCCTTCTCAGGACGGTGGACAAATGAG
GAGCACGTCCTCTTCTTGCAGGGCCTTGACGCTCATGGGAAAGACTGGAA
ACAAATACACAAGAAACTGACCACTCGGAGCCTTGGCCAAATCCGGAGTC
ACGCCCAGAAGTATTTCCAGAAGGTGGAGCAGGCGAAGCGGAGCGGGAGG
CTCGGCGACGGCGATTTTCAGCTCCTTATGGACGGCAAACGCATGGTCTT
CTCAAGGGGTGGGAGGAGACCGACAGGTGCCTCCAATGCGCTTATCCAGG
AGGCGGGCGGGTCCCGAGACAAGAGGCGTGCCACCGGGTGCGACGAGAGC
GCAGGCGCCGGAGTGACGGGGTCGTTGCCTTCCCCTTGTGCGTCCTCCAT
CTCCTCCCTCACCTCCTTGGCCTCTGAAAGCTGTCGCACAAGTACTCGCA
GTCCCGTGTCTCTCGCCTCACAAAGGACGCTGTCGGGCGCCACCGTGTCC
TCTTGCACCACCGCACCCTCCCCCCCTTCCCCCCCGATGAAGCTTCGGAC
CTTGAGGGTGACCACCTGCATCAAGACGAGGAGAGCAGCCTCGCTGAGCA
CCAGACCGACGGGTCCTTTGACGGGCTACCTCAGAATATGCACAATCCCG
TCCCGTTCCTCGAGCCTCATTATCGCCACCAGCAGCAGCAACACCAATAT
CCCAACCATTGGCAGCAGCAGCAGTGCCCTAGCTCGCCCTCGTCTACTTG
CTGCACACCTCGTGGCGGTGTCTGGAGGACCATGGCCGGCAAGGGCTGGC
TCCCCGACACCTGCCCCGTGAGCAGCATAGAGGAGGAGATCGACGCGGTC
GTCAAGTCCGAGCTCGAACACGTCGGCGTGAGCTGGGGCGGGAGGGAGGG
AGGGGCGAGGGAAGAAAGGAACGAGGACGAGGTCGAGGACGCGCTGGCGA
TGGACTTCTTGCGGGCCACGTCCCACCTCTTCCCCTTGGAGGAGCTCAGG
TCCTTTGTCACCGGCGTGGCGTCGGACGTGGGAAGCCACCGGGAAGATGG
GACGTGCCCGGCGCCGCATGCCATGGCGATGGACGAGCTTGTTGGCCATT
CGCCTGGGCCCACGGTACCGGCAGGGTGCTGTACAGGAAATAACGGCAAC
GTGCAAGGGGCAAACTGGGCGTGGACAGGGACAGGGGCGTCGGTGCCTGC
AGACACGGATCCCTTGACGGTCGGACCACTCATGTCAAGCTGCGCCGTCG
CCTCGGACGACGCGAGTCACCGTGGGAAGTCTGAGTCCTTTCTACGTCCT
TTTAAGTCGTGACGTCCGTCCCTCCCCTTGTGATCTCCTTTCTTCCTCTG
TCTGCTGCCGTGGGGTTAGACGAGGCGATCGGATCTTCTCAGGAGGAGGG
GAGATAGAAGGGGGGGGTAATCTTTGGCGGGAAATGACGAGCACTTCATT
CGATGAGCTCGCAATTCTATGACAGGTTGAAGCACGAGAAATGTGAGGTG
TTTTTCGATTGAGAGACCATAGGGACAGCACAGGGGATGTTGGGTTAAGG
TATCTTCATTAGTTGTAGGACGAAATACCAACAGGAGAGATGCAACAGAT
TTGAATAGAACCTTTAAATGA back to topCoding sequence (CDS) from alignment at CM002464.1:937703..939823- >rna5016 ID=rna5016|Name=rna5016|organism=Nannochloropsis gaditana|type=CDS|length=5424bp|location=Sequence derived from alignment at CM002464.1:937703..939823- (Nannochloropsis gaditana) GGGATGTTGGGTTAAGGTATCTTCATTAGTTGTAGGACGAAATACCAACA GGAGAGATGCAACAGATTTGAATAGAACCTTTAAATGACTTCGGACCTTG AGGGTGACCACCTGCATCAAGACGAGGAGAGCAGCCTCGCTGAGCACCAG ACCGACGGGTCCTTTGACGGGCTACCTCAGAATATGCACAATCCCGTCCC GTTCCTCGAGCCTCATTATCGCCACCAGCAGCAGCAACACCAATATCCCA ACCATTGGCAGCAGCAGCAGTGCCCTAGCTCGCCCTCGTCTACTTGCTGC ACACCTCGTGGCGGTGTCTGGAGGACCATGGCCGGCAAGGGCTGGCTCCC CGACACCTGCCCCGTGAGCAGCATAGAGGAGGAGATCGACGCGGTCGTCA AGTCCGAGCTCGAACACGTCGGCGTGAGCTGGGGCGGGAGGGAGGGAGGG GCGAGGGAAGAAAGGAACGAGGACGAGGTCGAGGACGCGCTGGCGATGGA CTTCTTGCGGGCCACGTCCCACCTCTTCCCCTTGGAGGAGCTCAGGTCCT TTGTCACCGGCGTGGCGTCGGACGTGGGAAGCCACCGGGAAGATGGGACG TGCCCGGCGCCGCATGCCATGGCGATGGACGAGCTTGTTGGCCATTCGCC TGGGCCCACGGTACCGGCAGGGTGCTGTACAGGAAATAACGGCAACGTGC AAGGGGCAAACTGGGCGTGGACAGGGACAGGGGCGTCGGTGCCTGCAGAC ACGGATCCCTTGACGGTCGGACCACTCATGTCAAGCTGCGCCGTCGCCTC GGACGACGCGAGTCACCGTGGGAAGTCTGAGTCCTTTCTACGTCCTTTTA AGTCGACGGTGGACAAATGAGGAGCACGTCCTCTTCTTGCAGGGCCTTGA CGCTCATGGGAAAGACTGGAAACAAATACACAAGAAACTGACCACTCGGA GCCTTGGCCAAATCCGGAGTCACGCCCAGAAGTATTTCCAGAAGGTGGAG CAGGCGAAGCGGAGCGGGAGGCTCGGCGACGGCGATTTTCAGCTCCTTAT GGACGGCAAACGCATGGTCTTCTCAAGGGGTGGGAGGAGACCGACAGATG GTGGCCTGTGCTGGGGAGCTCGAAGGATGCTGCGATAGCCTCAGCGCCTC AGAGTACCTGACAGAGGACAAAATCCATGATGCCGGAGATGAAGAAACGC CAAGACCAAATGTTTACTACTACGATGCTCACTTCTTGTTGCACTCAGCC GAAACACTGGTGTCTGTAGTGGCACGTGCTGCAGATGGCACTGCGGGTCA CATTGGTAACAAACGACGTGGTAGAAGGACGTGTAGCAAGCCGAAGACTC ACAACGGGGATGTTGGGTTAAGGTATCTTCATTAGTTGTAGGACGAAATA CCAACAGGAGAGATGCAACAGATTTGAATAGAACCTTTAAATGACTTCGG ACCTTGAGGGTGACCACCTGCATCAAGACGAGGAGAGCAGCCTCGCTGAG CACCAGACCGACGGGTCCTTTGACGGGCTACCTCAGAATATGCACAATCC CGTCCCGTTCCTCGAGCCTCATTATCGCCACCAGCAGCAGCAACACCAAT ATCCCAACCATTGGCAGCAGCAGCAGTGCCCTAGCTCGCCCTCGTCTACT TGCTGCACACCTCGTGGCGGTGTCTGGAGGACCATGGCCGGCAAGGGCTG GCTCCCCGACACCTGCCCCGTGAGCAGCATAGAGGAGGAGATCGACGCGG TCGTCAAGTCCGAGCTCGAACACGTCGGCGTGAGCTGGGGCGGGAGGGAG GGAGGGGCGAGGGAAGAAAGGAACGAGGACGAGGTCGAGGACGCGCTGGC GATGGACTTCTTGCGGGCCACGTCCCACCTCTTCCCCTTGGAGGAGCTCA GGTCCTTTGTCACCGGCGTGGCGTCGGACGTGGGAAGCCACCGGGAAGAT GGGACGTGCCCGGCGCCGCATGCCATGGCGATGGACGAGCTTGTTGGCCA TTCGCCTGGGCCCACGGTACCGGCAGGGTGCTGTACAGGAAATAACGGCA ACGTGCAAGGGGCAAACTGGGCGTGGACAGGGACAGGGGCGTCGGTGCCT GCAGACACGGATCCCTTGACGGTCGGACCACTCATGTCAAGCTGCGCCGT CGCCTCGGACGACGCGAGTCACCGTGGGAAGTCTGAGTCCTTTCTACGTC CTTTTAAGTCGACGGTGGACAAATGAGGAGCACGTCCTCTTCTTGCAGGG CCTTGACGCTCATGGGAAAGACTGGAAACAAATACACAAGAAACTGACCA CTCGGAGCCTTGGCCAAATCCGGAGTCACGCCCAGAAGTATTTCCAGAAG GTGGAGCAGGCGAAGCGGAGCGGGAGGCTCGGCGACGGCGATTTTCAGCT CCTTATGGACGGCAAACGCATGGTCTTCTCAAGGGGTGGGAGGAGACCGA CAGATGGTGGCCTGTGCTGGGGAGCTCGAAGGATGCTGCGATAGCCTCAG CGCCTCAGAGTACCTGACAGAGGACAAAATCCATGATGCCGGAGATGAAG AAACGCCAAGACCAAATGTTTACTACTACGATGCTCACTTCTTGTTGCAC TCAGCCGAAACACTGGTGTCTGTAGTGGCACGTGCTGCAGATGGCACTGC GGGTCACATTGGTAACAAACGACGTGGTAGAAGGACGTGTAGCAAGCCGA AGACTCACAACGGGGATGTTGGGTTAAGGTATCTTCATTAGTTGTAGGAC GAAATACCAACAGGAGAGATGCAACAGATTTGAATAGAACCTTTAAATGA CTTCGGACCTTGAGGGTGACCACCTGCATCAAGACGAGGAGAGCAGCCTC GCTGAGCACCAGACCGACGGGTCCTTTGACGGGCTACCTCAGAATATGCA CAATCCCGTCCCGTTCCTCGAGCCTCATTATCGCCACCAGCAGCAGCAAC ACCAATATCCCAACCATTGGCAGCAGCAGCAGTGCCCTAGCTCGCCCTCG TCTACTTGCTGCACACCTCGTGGCGGTGTCTGGAGGACCATGGCCGGCAA GGGCTGGCTCCCCGACACCTGCCCCGTGAGCAGCATAGAGGAGGAGATCG ACGCGGTCGTCAAGTCCGAGCTCGAACACGTCGGCGTGAGCTGGGGCGGG AGGGAGGGAGGGGCGAGGGAAGAAAGGAACGAGGACGAGGTCGAGGACGC GCTGGCGATGGACTTCTTGCGGGCCACGTCCCACCTCTTCCCCTTGGAGG AGCTCAGGTCCTTTGTCACCGGCGTGGCGTCGGACGTGGGAAGCCACCGG GAAGATGGGACGTGCCCGGCGCCGCATGCCATGGCGATGGACGAGCTTGT TGGCCATTCGCCTGGGCCCACGGTACCGGCAGGGTGCTGTACAGGAAATA ACGGCAACGTGCAAGGGGCAAACTGGGCGTGGACAGGGACAGGGGCGTCG GTGCCTGCAGACACGGATCCCTTGACGGTCGGACCACTCATGTCAAGCTG CGCCGTCGCCTCGGACGACGCGAGTCACCGTGGGAAGTCTGAGTCCTTTC TACGTCCTTTTAAGTCGACGGTGGACAAATGAGGAGCACGTCCTCTTCTT GCAGGGCCTTGACGCTCATGGGAAAGACTGGAAACAAATACACAAGAAAC TGACCACTCGGAGCCTTGGCCAAATCCGGAGTCACGCCCAGAAGTATTTC CAGAAGGTGGAGCAGGCGAAGCGGAGCGGGAGGCTCGGCGACGGCGATTT TCAGCTCCTTATGGACGGCAAACGCATGGTCTTCTCAAGGGGTGGGAGGA GACCGACAGATGGTGGCCTGTGCTGGGGAGCTCGAAGGATGCTGCGATAG CCTCAGCGCCTCAGAGTACCTGACAGAGGACAAAATCCATGATGCCGGAG ATGAAGAAACGCCAAGACCAAATGTTTACTACTACGATGCTCACTTCTTG TTGCACTCAGCCGAAACACTGGTGTCTGTAGTGGCACGTGCTGCAGATGG CACTGCGGGTCACATTGGTAACAAACGACGTGGTAGAAGGACGTGTAGCA AGCCGAAGACTCACAACGGGGATGTTGGGTTAAGGTATCTTCATTAGTTG TAGGACGAAATACCAACAGGAGAGATGCAACAGATTTGAATAGAACCTTT AAATGACTTCGGACCTTGAGGGTGACCACCTGCATCAAGACGAGGAGAGC AGCCTCGCTGAGCACCAGACCGACGGGTCCTTTGACGGGCTACCTCAGAA TATGCACAATCCCGTCCCGTTCCTCGAGCCTCATTATCGCCACCAGCAGC AGCAACACCAATATCCCAACCATTGGCAGCAGCAGCAGTGCCCTAGCTCG CCCTCGTCTACTTGCTGCACACCTCGTGGCGGTGTCTGGAGGACCATGGC CGGCAAGGGCTGGCTCCCCGACACCTGCCCCGTGAGCAGCATAGAGGAGG AGATCGACGCGGTCGTCAAGTCCGAGCTCGAACACGTCGGCGTGAGCTGG GGCGGGAGGGAGGGAGGGGCGAGGGAAGAAAGGAACGAGGACGAGGTCGA GGACGCGCTGGCGATGGACTTCTTGCGGGCCACGTCCCACCTCTTCCCCT TGGAGGAGCTCAGGTCCTTTGTCACCGGCGTGGCGTCGGACGTGGGAAGC CACCGGGAAGATGGGACGTGCCCGGCGCCGCATGCCATGGCGATGGACGA GCTTGTTGGCCATTCGCCTGGGCCCACGGTACCGGCAGGGTGCTGTACAG GAAATAACGGCAACGTGCAAGGGGCAAACTGGGCGTGGACAGGGACAGGG GCGTCGGTGCCTGCAGACACGGATCCCTTGACGGTCGGACCACTCATGTC AAGCTGCGCCGTCGCCTCGGACGACGCGAGTCACCGTGGGAAGTCTGAGT CCTTTCTACGTCCTTTTAAGTCGACGGTGGACAAATGAGGAGCACGTCCT CTTCTTGCAGGGCCTTGACGCTCATGGGAAAGACTGGAAACAAATACACA AGAAACTGACCACTCGGAGCCTTGGCCAAATCCGGAGTCACGCCCAGAAG TATTTCCAGAAGGTGGAGCAGGCGAAGCGGAGCGGGAGGCTCGGCGACGG CGATTTTCAGCTCCTTATGGACGGCAAACGCATGGTCTTCTCAAGGGGTG GGAGGAGACCGACAGATGGTGGCCTGTGCTGGGGAGCTCGAAGGATGCTG CGATAGCCTCAGCGCCTCAGAGTACCTGACAGAGGACAAAATCCATGATG CCGGAGATGAAGAAACGCCAAGACCAAATGTTTACTACTACGATGCTCAC TTCTTGTTGCACTCAGCCGAAACACTGGTGTCTGTAGTGGCACGTGCTGC AGATGGCACTGCGGGTCACATTGGTAACAAACGACGTGGTAGAAGGACGT GTAGCAAGCCGAAGACTCACAACG back 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