|
|
Properties
| Property Name | Value |
|---|
| Product | 2fe-2s iron-sulfur cluster binding domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_101185g2.10087.mrna |
| Orig protein id | gnl|cribi|Naga_101185g2.10087 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:928090..929770 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5013 ID=rna5013|Name=rna5013|organism=Nannochloropsis gaditana|type=mRNA|length=603bp
CACCTAAAACTAGATGAAAGATCGATGTACAGGCCTTCATGCTCACAGAA
TCCATTCCAACTTGCACGCATGGACTCTCTGTGGGCTTAGGGACGCACGA
GGGACATCAACTTGCATAGGAGCAGAGTCCCCTTTTTGCGTCAGACAGAG
ATACCATGGGCCTTCTGAAGGAGGGCCAACCCCTCCAATGGGAAGATGCT
CTCCCTTACTTGCAATACGTGCGGGAGCACGGCGTCCTCCAATTTCTCGT
CACGTACGAGGCAATGCATCCCTCATTGGCCTCGCATCCTCATTCTCGAT
TGTATCCTTACTAGGACACGAAAGCTTTCTCTGTATCCTATGACCTTCTT
CCTCTTTCCCTTTTTTCTTTCCGAGGCTTTCTTCATGACGTTCTACCTAA
CTCCTTACCTTTACCTTTTTCCCACACCCTCCTCGGCGTCGTCCCCTATG
ACGAATGACTAATGGGTGCATGTACACATTCCCGATGACTAGTGGATGCA
TGTGCACACACATATATATACATACGTCTTCTCCTTTTTTGTGTGTTCCT
ATTTCTCACGTTTCCCACTCCGCTTTCCTCTTCGACGTCCCTTCCTGGGG
CCG back to topprotein sequence of rna5013 >rna5013-protein ID=rna5013-protein|Name=rna5013|organism=Nannochloropsis gaditana|type=polypeptide|length=224bp
MIPLGLRDHLRRPCAMVAPGVRAGGRSRKAMLHVASPFLRRRALACFFPS
SLPPPSSWQGDRAILSSIGSTLPKSFVGDLRRRLLRRTYHGTVPRAKDVT
MTWHVEGEAIAVTAPEGKTLLEVAHDNDIELEGACGGELACSTCHVVFTP
ELYARLPAKKEEEEDMLDLAWGLTETSRLGCQIKVTPLLENAVITIPEET
NNMLGGEDEGKGGAAGGQGEPWAK back to topmRNA from alignment at CM002464.1:928090..929770+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5013 ID=rna5013|Name=rna5013|organism=Nannochloropsis gaditana|type=mRNA|length=1681bp|location=Sequence derived from alignment at CM002464.1:928090..929770+ (Nannochloropsis gaditana)
CGCACTGGGGGGCAGCGATTAAAATGTTCATGATCCAAAGGCCCGTTACC
ACGAACAAAACACATCTTCGAAGAAGCCATATTTATCGTATTCTCTACGA
CGTGAGCTATGTGGATACCCGATTGAATATTTATGTGGTAGGAATGAACT
GCTTTGAGTTTTCCAggccattttttttcttgcgaTAAGGGGAGACTGTA
ACCTCGCAAACACATAACAAAGCCAAAAACATGACTTGTACGGTCCTGTC
CGCAAAATGGGGCTTCAAATCCATTGAACAGCGTGTTTAGCTAGCACCAT
tctgtcattttcctcccaaCCTTTGCAAAAACATCTTTCACCAAGGTGGA
CGGATAAAAAACGGAATGAGCCGGCAGACCGCCAGGACGACAGTTCAATG
AGGGGGGCCAACAAATATTCACACATACCCAGACCCCGTCGTCTACTTAG
TAATGTATGATACCACTAGGTCTACGTGATCACTTGAGACGGCCGTGTGC
AATGGTTGCACCAGGTGTGCGTGCAGGGGGGCGGTCAAGAAAAGTAAGCG
TGCTCGCGTACGGTATCAGAGGTCATCGTCTGAAAGGCCGCCCCAAGCCC
TTTCAAACGCATCAATgcactgccctccctcacattCCCGACCTCACACC
CCACAATTCATCCCCAGGCAATGCTGCATGtagcctctcctttcctccgt
cgtcGTGCCCTGGCCTGTTTTTTTCCGTCTTCgttgccccctccttcgtc
ctggCAGGGAGATCGCGCCATCCTGTCTTCCATTggctccaccctcccca
aaTCCTTTGTTGGCGATCTGAGAAGAAGACTACTGCGTCGGACCTACCAC
GGCACGGTCCCGCGGGCGAAAGACGTGACCATGACGTGGCACGTCGAAGG
TGAGGCGATAGCCGTCACCGCgccggagggaaagacgtTATTGGAGGTGG
CGCATGACAACGACATCGAATTGGAAGGTGCTTGCGGTGGAGAGTTGGCC
TGCTCCACCTGCCACGTCGTTTTTACCCCCGAATTGTACGCGCGCCTGCc
ggcaaagaaggaggaagaggaggacatgctgGATCTGGCCTGGGGCCTCA
CCGAGACCTCTCGCCTCGGCTGCCAGATCAAAGTGACGCCCCTGTTGGAA
AACGCCGTTATTACAATACCAGAAGAGACGAATAACatgctgggagggga
ggatgaggggaagggaggggcggcggggggacagggagagcCTTGGGCGA
AGTAAGGGGctgcttccgccctccctccctccctccctccctccctccct
ccctccctccctccttccctccctccttccctttctgcctcccttcctct
ccttaaTTTAATCCACGATCCTGGCGGGAAAtgcgaggcaggagggcatG
CGCCTCGCACGCTTGGATGAGTGGATGACGCCGTCTCTGGGGATGAAAAG
CAACCAACCACGTTCCCGGACCGGACGCCTGAGGCATTTGAGATCACGAC
GCTTGTGAAGGACGAGCACATTTCTTACCAACAAACAAACAACAACATAC
TGCTCTGAGTTTATCCTCACCCCATCTCTTCATCATTTCGATCAAGCTTG
ATTTAATGCTGTATTTAATAAGCCCTAGCGAGAGGGGTTGAAGCCCCTGT
GAACGGGCAGGCATCaggaccctccccctcc back to topCoding sequence (CDS) from alignment at CM002464.1:928090..929770+ >rna5013 ID=rna5013|Name=rna5013|organism=Nannochloropsis gaditana|type=CDS|length=1350bp|location=Sequence derived from alignment at CM002464.1:928090..929770+ (Nannochloropsis gaditana)
ATGATACCACTAGGTCTACGTGATCACTTGAGACGGCCGTGTGCAATGGT
TGCACCAGGTGTGCGTGCAGGGGGGCGGTCAAGAAAAGCAATGCTGCATG
tagcctctcctttcctccgtcgtcGTGCCCTGGCCTGTTTTTTTCCGTCT
TCgttgccccctccttcgtcctggCAGGGAGATCGCGCCATCCTGTCTTC
CATTggctccaccctccccaaaTCCTTTGTTGGCGATCTGAGAAGAAGAC
TACTGCGTCGGACCTACCACGGCACGGTCCCGCGGGCGAAAGACGTGACC
ATGACGTGGCACGTCGAAGGTGAGGCGATAGCCGTCACCGCgccggaggg
aaagacgtTATTGGAGGTGGCGCATGACAACGACATCGAATTGGAAGGTG
CTTGCGGTGGAGAGTTGGCCTGCTCCACCTGCCACGTCGTTTTTACCCCC
GAATTGTACGCGCGCCTGCcggcaaagaaggaggaagaggaggacatgct
gGATCTGGCCTGGGGCCTCACCGAGACCTCTCGCCTCGGCTGCCAGATCA
AAGTGACGCCCCTGTTGGAAAACGCCGTTATTACAATACCAGAAGAGACG
AATAACatgctgggaggggaggatgaggggaagggaggggcggcgggggg
acagggagagcCTTGGGCGAAGTAAATGATACCACTAGGTCTACGTGATC
ACTTGAGACGGCCGTGTGCAATGGTTGCACCAGGTGTGCGTGCAGGGGGG
CGGTCAAGAAAAGCAATGCTGCATGtagcctctcctttcctccgtcgtcG
TGCCCTGGCCTGTTTTTTTCCGTCTTCgttgccccctccttcgtcctggC
AGGGAGATCGCGCCATCCTGTCTTCCATTggctccaccctccccaaaTCC
TTTGTTGGCGATCTGAGAAGAAGACTACTGCGTCGGACCTACCACGGCAC
GGTCCCGCGGGCGAAAGACGTGACCATGACGTGGCACGTCGAAGGTGAGG
CGATAGCCGTCACCGCgccggagggaaagacgtTATTGGAGGTGGCGCAT
GACAACGACATCGAATTGGAAGGTGCTTGCGGTGGAGAGTTGGCCTGCTC
CACCTGCCACGTCGTTTTTACCCCCGAATTGTACGCGCGCCTGCcggcaa
agaaggaggaagaggaggacatgctgGATCTGGCCTGGGGCCTCACCGAG
ACCTCTCGCCTCGGCTGCCAGATCAAAGTGACGCCCCTGTTGGAAAACGC
CGTTATTACAATACCAGAAGAGACGAATAACatgctgggaggggaggatg
aggggaagggaggggcggcggggggacagggagagcCTTGGGCGAAGTAA back to top
|