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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF760 |
| Orig transcript id | gnl|cribi|Naga_100096g8.986.mrna |
| Orig protein id | gnl|cribi|Naga_100096g8.986 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1251415..1253522 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna500 ID=rna500|Name=rna500|organism=Nannochloropsis gaditana|type=mRNA|length=1431bp
GTCTCACGTATAGAGGTAGTACGGGCGCTAAATGGATCGCTGGCTTTATA
AATATCACCGGTAAGCAAGCATAGAGCTCAGGATGCCACAGACCTCCTAC
TTGTAGTCAACCGACCGACGTTTAAGTGGAACAGGAGTCGTTCTGACGGC
ATTGTTTCCGGGCGCACTGACCAGGCAGTGCACAATATGGACACCACATC
GAAAAGCCGTGCAGATTCGTCCACAAATGCAAAGCCAGTCGACGATGCCA
TCGATATAAACGCTGTCAAACACTGTCAGACCCAGCTTAGAGCGGATCGG
AATCGGCAATACCCATCTCCACGCCCGGCGTCGACTCAATCAACGCCATC
CGGTGATGCTGCGACGCCATTGAGAGAAGGAACGTCCATAGTTCGGAGTG
TGATCAACTCCCTATCGGGGGCTATGGTCTATACGGACGTTGGCAACGTC
GAGACCAATCGCCGGCTGTGGAACCGATACGCAGAGGAGTGGCACGGCAA
TTGTGCAAGAAATGGCCCGTATTCTGGCAGTGCCCGCAGTCCAAGCAGCG
AGCTACCGGCAAATAAACCAAATGTCTGGGTCCAGCAAATGGCAGCCAAC
ACGGCCAAAACAAGCAAATCAACGCCGTACTCCCTGCCCGCCCTGGCCCT
GATCGGTCAGGAGTGGAGCAGCCCAGAGGACCTGGAAGAAGTCGTCCGAG
ACTTCATCCTGCCGTACTTGACGCCGGAAAGTGCGGTTGTGGAAGTGGGA
GTCGGTGGGGGCAGGGTGGCGGCACTGGTGCTGGGTAAGTGCATGCGTTT
GACGTGTCTGGACATCTCTGAGCGTATGCTCGAAGCCGCTCGTACCGCCC
TTGCTGCGCATCCTGCGGCGGGTGCCACGGTGTTAGAGTTTATCCTTGTG
GGGAATGATTCGAACCCATCCCTGCCGTCTCAGCGGGTGGAGTACCCCGT
TTCCTTGCACGGTCGCTGCGACTTCGTCTACTGCTTCGACGTGCTGGTTC
ACGTGGACGTGCATACCCTCTATCACACACTGCGCGAAATCCGACGCCTC
CTCAAGGCCTCTGGGAAGGCGTTCCTCTCCACTGCCAACATTCTCAGTCC
GGCAGGCTGGCGTCGTTTCGCAGCCCAGGATAAATACACAGTGGGGGGAT
TCTATTTCGTCTCACCAGAGATAGTGCATGGCATGCTTGCGAAGGTGGGT
TTCCGCGTGGTCCAGCACAGCGAGATCCCAGAGGGATTCAAGGAGCTCAG
TGATACGCACGGTTTAGCCAAAGGTAATTTGTACTACGGCCGAGACTACC
TCGTGGTGGTGGAGAAAGCGCCTCCTGAACAGATGCGATGCGCGTCGGCA
GAAAGGGGAACCTGCTAAGTTTAAAATATAGATTTCAAGGCACCACGAGG
TTGCATCGTCTTCATAATTTCACGTCATGTC back to topprotein sequence of rna500 >rna500-protein ID=rna500-protein|Name=rna500|organism=Nannochloropsis gaditana|type=polypeptide|length=503bp
MQVPSTTLLLLACCTWYSCRGWLLPRPVIAPSAFRRRGNGNCFSPHYQDP
AAMLSQPRHRAARTTLHLWKAWGLGGNNGTASSHEGKGDKAEMKNEGAAK
DSEDDVEEDDDDMDSQALLGDSGADEDSIIIDGIDDDEDEFLHGNRKNAE
VPRGTKSGLEKTESGRFASAYTISPTASGSPPTFPDTGSMESTTVKQLTE
KSLAQSDENSFFDGFEGFAGRRVSYSSQPKARHNIVFEIWRQRSPEEIAI
LYKGQHQYSASRRVQEAINEQVSTLLGMFLREPDFQSHLQIQGGQLANLF
FKLQLMGYMFANADKVLSASSSLNMKKKARQPPVGSLEGTLTVVPGGRTN
VLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQ
GNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGNQWN
PKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFGSTGLGQGG
GFP back to topmRNA from alignment at CM002455.1:1251415..1253522- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna500 ID=rna500|Name=rna500|organism=Nannochloropsis gaditana|type=mRNA|length=2108bp|location=Sequence derived from alignment at CM002455.1:1251415..1253522- (Nannochloropsis gaditana)
GGAGCATTATTGTATGTCATGAATTGAGTCTTACATCGTTTTCTTCTTTT
CGGAAATGTGCTTCTATTTCCGTGTGTTCCGGCACGGGTTCCCACTAACT
ACGCTACATCTTTACCCCTTGCATCGACCAGACGGCTGCTAACGCATGCA
AGTACCTTCAACCACACTGCTTTTGCTGGCCTGCTGTACCTGGTACTCCT
GTCGCGGATGGCTATTGCCTCGACCAGTCATCGCGCCTTCAGCCTTCCGA
AGGCGAGGCAATGGAAACTGCTTCAGCCCTCACTACCAAGATCCTGCAGC
TATGCTGAGCCAGGTATGTGGCCGCGTTGATGTATAGCTTGCCATATGCC
GGTCAATTTACACGGCTAGACGTATCCTGACCCCATTGCACTCTTTTATT
ACTTTACTACATCTACTCATGTCCACTGAAGCCACGTCACCGAGCTGCGC
GGACTACATTGCACCTGTGGAAAGCCTGGGGCCTAGGAGGGAACAACGGC
ACAGCTTCGTCACATGAAGGAAAGGGAGACAAAGCAGAGATGAAAAATGA
AGGAGCAGCGAAGGATTCTGAAGATGATGTTGAGGAGGACGACGATGATA
TGGATTCGCAGGCCCTGCTCGGAGATTCTGGTGCCGACGAGGATAGCATC
ATAATTGACGGGATCGACGACGACGAAGATGAATTCCTGCATGGCAACAG
AAAAAATGCCGAGGTGCCGAGAGGCACAAAATCGGGGCTTGAAAAGACGG
AGAGTGGAAGATTTGCATCCGCGTATACCATCTCCCCTACAGCCTCCGGG
AGCCCTCCTACCTTTCCTGACACGGGCTCTATGGAGAGCACCACTGTCAA
ACAGCTTACGGAGAAGAGTCTAGCCCAGAGTGATGAGAACAGCTTTTTCG
ACGGCTTCGAAGGCTTCGCCGGTCGGCGTGTGTCGTACTCGAGCCAACCT
AAGGCCCGACACAACATTGTCTTCGAAATATGGCGGCAGCGCAGCCCGGA
GGAGATCGCGATCCTTTACAAGGGGCAACACCAGTACTCGGCGTCGAGGC
GGGTGCAAGAAGCAATCAATGAGCAAGTTTCCACGCTCCTTGGTAAGCAC
CTGTCCACCCCATGTCACGTGTACCGTGTATGAAGGGAGGACTCCCTCAG
TCTTATCCATTCTCTCCCCGGCGGCGACTCGTGGTCGCGTTATTTCAAAT
TTCTTTCCTCCATCGCGCTAGATGTGAGTCTGTGCGGAAGCCTCACGCTC
GAATACCCGTCTGCGCCCATCTCCTTCCCACCCCAGGCATGTTTCTTCGC
GAGCCTGATTTCCAGTCCCACCTTCAGATCCAAGGAGGGCAGCTGGCAAA
TCTTTTTTTCAAGCTCCAGTTGATGGGGTACATGTTTGCAAATGCCGACA
AAGTATTGTCCGCCTCCAGCAGTCTGAATATGAAAAAGAAGGCCCGCCAG
CCCCCCGTCGGGTCCTTGGAGGGAACGCTGACCGTCGTGCCAGGAGGGCG
TACGAACGTCTTGGGCAGTGGAGAGGAGGGTAAAATGGAAGGCGCAAGAA
ACGTGACCATGGGTGCGAAGGAGCTGCTCGGAAGCCTGGTTCGGGAGGTG
GAGGCGTTGAGAGAGGAGGTAGACCGAGCGAGGGTGGCGCGAGAGGCGAG
CCGGCAGGGCAACCTCCTGACCTTCATTCGGAGTCTGCCCGAAGAGCAAC
AGCGATCTTTGACGGAAAGTGCGCCGGATTATGTCCTGGACTGCATGCGG
AAATTGGTGGATCTAGCACTCGCGCGGGCCATCCCCACGGTAGGGAATCA
GTGGAACCCGAAATCTCCCGTCCTGATTCCTGGGAAAAGCATATTTGCCG
AGCTATGCATCATGCAGGTGGTGCAAGGGTACCTCCTGGCAGCGACGGAG
GAGGACCAAGCACAGCAATTAAAATTGTTTGGAAGCACTGGGCTCGGTCA
GGGTGGGGGGTTTCCGTAGGGGAAGTTGGGGGGGGACACACGGCGCATGG
GGTTGGGCGGAGAATGCGCGAGGGGAAAGCCAGAATTTAAATAACAAAAT
TGTGAAAATAAAGCGATGCACGGACATGACGTGAAATTATGAAGACGATG
CAACCTCG back to topCoding sequence (CDS) from alignment at CM002455.1:1251415..1253522- >rna500 ID=rna500|Name=rna500|organism=Nannochloropsis gaditana|type=CDS|length=4536bp|location=Sequence derived from alignment at CM002455.1:1251415..1253522- (Nannochloropsis gaditana)
GCATGTTTCTTCGCGAGCCTGATTTCCAGTCCCACCTTCAGATCCAAGGA
GGGCAGCTGGCAAATCTTTTTTTCAAGCTCCAGTTGATGGGGTACATGTT
TGCAAATGCCGACAAAGTATTGTCCGCCTCCAGCAGTCTGAATATGAAAA
AGAAGGCCCGCCAGCCCCCCGTCGGGTCCTTGGAGGGAACGCTGACCGTC
GTGCCAGGAGGGCGTACGAACGTCTTGGGCAGTGGAGAGGAGGGTAAAAT
GGAAGGCGCAAGAAACGTGACCATGGGTGCGAAGGAGCTGCTCGGAAGCC
TGGTTCGGGAGGTGGAGGCGTTGAGAGAGGAGGTAGACCGAGCGAGGGTG
GCGCGAGAGGCGAGCCGGCAGGGCAACCTCCTGACCTTCATTCGGAGTCT
GCCCGAAGAGCAACAGCGATCTTTGACGGAAAGTGCGCCGGATTATGTCC
TGGACTGCATGCGGAAATTGGTGGATCTAGCACTCGCGCGGGCCATCCCC
ACGGTAGGGAATCAGTGGAACCCGAAATCTCCCGTCCTGATTCCTGGGAA
AAGCATATTTGCCGAGCTATGCATCATGCAGGTGGTGCAAGGGTACCTCC
TGGCAGCGACGGAGGAGGACCAAGCACAGCAATTAAAATTGTTTGGAAGC
ACTGGGCTCGGTCAGGGTGGGGGGTTTCCGTAGCCACGTCACCGAGCTGC
GCGGACTACATTGCACCTGTGGAAAGCCTGGGGCCTAGGAGGGAACAACG
GCACAGCTTCGTCACATGAAGGAAAGGGAGACAAAGCAGAGATGAAAAAT
GAAGGAGCAGCGAAGGATTCTGAAGATGATGTTGAGGAGGACGACGATGA
TATGGATTCGCAGGCCCTGCTCGGAGATTCTGGTGCCGACGAGGATAGCA
TCATAATTGACGGGATCGACGACGACGAAGATGAATTCCTGCATGGCAAC
AGAAAAAATGCCGAGGTGCCGAGAGGCACAAAATCGGGGCTTGAAAAGAC
GGAGAGTGGAAGATTTGCATCCGCGTATACCATCTCCCCTACAGCCTCCG
GGAGCCCTCCTACCTTTCCTGACACGGGCTCTATGGAGAGCACCACTGTC
AAACAGCTTACGGAGAAGAGTCTAGCCCAGAGTGATGAGAACAGCTTTTT
CGACGGCTTCGAAGGCTTCGCCGGTCGGCGTGTGTCGTACTCGAGCCAAC
CTAAGGCCCGACACAACATTGTCTTCGAAATATGGCGGCAGCGCAGCCCG
GAGGAGATCGCGATCCTTTACAAGGGGCAACACCAGTACTCGGCGTCGAG
GCGGGTGCAAGAAGCAATCAATGAGCAAGTTTCCACGCTCCTTGATGCAA
GTACCTTCAACCACACTGCTTTTGCTGGCCTGCTGTACCTGGTACTCCTG
TCGCGGATGGCTATTGCCTCGACCAGTCATCGCGCCTTCAGCCTTCCGAA
GGCGAGGCAATGGAAACTGCTTCAGCCCTCACTACCAAGATCCTGCAGCT
ATGCTGAGCCAGGCATGTTTCTTCGCGAGCCTGATTTCCAGTCCCACCTT
CAGATCCAAGGAGGGCAGCTGGCAAATCTTTTTTTCAAGCTCCAGTTGAT
GGGGTACATGTTTGCAAATGCCGACAAAGTATTGTCCGCCTCCAGCAGTC
TGAATATGAAAAAGAAGGCCCGCCAGCCCCCCGTCGGGTCCTTGGAGGGA
ACGCTGACCGTCGTGCCAGGAGGGCGTACGAACGTCTTGGGCAGTGGAGA
GGAGGGTAAAATGGAAGGCGCAAGAAACGTGACCATGGGTGCGAAGGAGC
TGCTCGGAAGCCTGGTTCGGGAGGTGGAGGCGTTGAGAGAGGAGGTAGAC
CGAGCGAGGGTGGCGCGAGAGGCGAGCCGGCAGGGCAACCTCCTGACCTT
CATTCGGAGTCTGCCCGAAGAGCAACAGCGATCTTTGACGGAAAGTGCGC
CGGATTATGTCCTGGACTGCATGCGGAAATTGGTGGATCTAGCACTCGCG
CGGGCCATCCCCACGGTAGGGAATCAGTGGAACCCGAAATCTCCCGTCCT
GATTCCTGGGAAAAGCATATTTGCCGAGCTATGCATCATGCAGGTGGTGC
AAGGGTACCTCCTGGCAGCGACGGAGGAGGACCAAGCACAGCAATTAAAA
TTGTTTGGAAGCACTGGGCTCGGTCAGGGTGGGGGGTTTCCGTAGCCACG
TCACCGAGCTGCGCGGACTACATTGCACCTGTGGAAAGCCTGGGGCCTAG
GAGGGAACAACGGCACAGCTTCGTCACATGAAGGAAAGGGAGACAAAGCA
GAGATGAAAAATGAAGGAGCAGCGAAGGATTCTGAAGATGATGTTGAGGA
GGACGACGATGATATGGATTCGCAGGCCCTGCTCGGAGATTCTGGTGCCG
ACGAGGATAGCATCATAATTGACGGGATCGACGACGACGAAGATGAATTC
CTGCATGGCAACAGAAAAAATGCCGAGGTGCCGAGAGGCACAAAATCGGG
GCTTGAAAAGACGGAGAGTGGAAGATTTGCATCCGCGTATACCATCTCCC
CTACAGCCTCCGGGAGCCCTCCTACCTTTCCTGACACGGGCTCTATGGAG
AGCACCACTGTCAAACAGCTTACGGAGAAGAGTCTAGCCCAGAGTGATGA
GAACAGCTTTTTCGACGGCTTCGAAGGCTTCGCCGGTCGGCGTGTGTCGT
ACTCGAGCCAACCTAAGGCCCGACACAACATTGTCTTCGAAATATGGCGG
CAGCGCAGCCCGGAGGAGATCGCGATCCTTTACAAGGGGCAACACCAGTA
CTCGGCGTCGAGGCGGGTGCAAGAAGCAATCAATGAGCAAGTTTCCACGC
TCCTTGATGCAAGTACCTTCAACCACACTGCTTTTGCTGGCCTGCTGTAC
CTGGTACTCCTGTCGCGGATGGCTATTGCCTCGACCAGTCATCGCGCCTT
CAGCCTTCCGAAGGCGAGGCAATGGAAACTGCTTCAGCCCTCACTACCAA
GATCCTGCAGCTATGCTGAGCCAGGCATGTTTCTTCGCGAGCCTGATTTC
CAGTCCCACCTTCAGATCCAAGGAGGGCAGCTGGCAAATCTTTTTTTCAA
GCTCCAGTTGATGGGGTACATGTTTGCAAATGCCGACAAAGTATTGTCCG
CCTCCAGCAGTCTGAATATGAAAAAGAAGGCCCGCCAGCCCCCCGTCGGG
TCCTTGGAGGGAACGCTGACCGTCGTGCCAGGAGGGCGTACGAACGTCTT
GGGCAGTGGAGAGGAGGGTAAAATGGAAGGCGCAAGAAACGTGACCATGG
GTGCGAAGGAGCTGCTCGGAAGCCTGGTTCGGGAGGTGGAGGCGTTGAGA
GAGGAGGTAGACCGAGCGAGGGTGGCGCGAGAGGCGAGCCGGCAGGGCAA
CCTCCTGACCTTCATTCGGAGTCTGCCCGAAGAGCAACAGCGATCTTTGA
CGGAAAGTGCGCCGGATTATGTCCTGGACTGCATGCGGAAATTGGTGGAT
CTAGCACTCGCGCGGGCCATCCCCACGGTAGGGAATCAGTGGAACCCGAA
ATCTCCCGTCCTGATTCCTGGGAAAAGCATATTTGCCGAGCTATGCATCA
TGCAGGTGGTGCAAGGGTACCTCCTGGCAGCGACGGAGGAGGACCAAGCA
CAGCAATTAAAATTGTTTGGAAGCACTGGGCTCGGTCAGGGTGGGGGGTT
TCCGTAGCCACGTCACCGAGCTGCGCGGACTACATTGCACCTGTGGAAAG
CCTGGGGCCTAGGAGGGAACAACGGCACAGCTTCGTCACATGAAGGAAAG
GGAGACAAAGCAGAGATGAAAAATGAAGGAGCAGCGAAGGATTCTGAAGA
TGATGTTGAGGAGGACGACGATGATATGGATTCGCAGGCCCTGCTCGGAG
ATTCTGGTGCCGACGAGGATAGCATCATAATTGACGGGATCGACGACGAC
GAAGATGAATTCCTGCATGGCAACAGAAAAAATGCCGAGGTGCCGAGAGG
CACAAAATCGGGGCTTGAAAAGACGGAGAGTGGAAGATTTGCATCCGCGT
ATACCATCTCCCCTACAGCCTCCGGGAGCCCTCCTACCTTTCCTGACACG
GGCTCTATGGAGAGCACCACTGTCAAACAGCTTACGGAGAAGAGTCTAGC
CCAGAGTGATGAGAACAGCTTTTTCGACGGCTTCGAAGGCTTCGCCGGTC
GGCGTGTGTCGTACTCGAGCCAACCTAAGGCCCGACACAACATTGTCTTC
GAAATATGGCGGCAGCGCAGCCCGGAGGAGATCGCGATCCTTTACAAGGG
GCAACACCAGTACTCGGCGTCGAGGCGGGTGCAAGAAGCAATCAATGAGC
AAGTTTCCACGCTCCTTGATGCAAGTACCTTCAACCACACTGCTTTTGCT
GGCCTGCTGTACCTGGTACTCCTGTCGCGGATGGCTATTGCCTCGACCAG
TCATCGCGCCTTCAGCCTTCCGAAGGCGAGGCAATGGAAACTGCTTCAGC
CCTCACTACCAAGATCCTGCAGCTATGCTGAGCCAG back to top
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