EWM30178.1, cds500 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|585112835|gb|EWM30178.1| (Protein of unknown function DUF760 [Nannochloropsis gaditana]) HSP 1 Score: 1041.18 bits (2691), Expect = 0.000e+0 Identity = 503/503 (100.00%), Postives = 503/503 (100.00%), Query Frame = 0
Query: 1 MQVPSTTLLLLACCTWYSCRGWLLPRPVIAPSAFRRRGNGNCFSPHYQDPAAMLSQPRHRAARTTLHLWKAWGLGGNNGTASSHEGKGDKAEMKNEGAAKDSEDDVEEDDDDMDSQALLGDSGADEDSIIIDGIDDDEDEFLHGNRKNAEVPRGTKSGLEKTESGRFASAYTISPTASGSPPTFPDTGSMESTTVKQLTEKSLAQSDENSFFDGFEGFAGRRVSYSSQPKARHNIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMFLREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKARQPPVGSLEGTLTVVPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFGSTGLGQGGGFP 503
MQVPSTTLLLLACCTWYSCRGWLLPRPVIAPSAFRRRGNGNCFSPHYQDPAAMLSQPRHRAARTTLHLWKAWGLGGNNGTASSHEGKGDKAEMKNEGAAKDSEDDVEEDDDDMDSQALLGDSGADEDSIIIDGIDDDEDEFLHGNRKNAEVPRGTKSGLEKTESGRFASAYTISPTASGSPPTFPDTGSMESTTVKQLTEKSLAQSDENSFFDGFEGFAGRRVSYSSQPKARHNIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMFLREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKARQPPVGSLEGTLTVVPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFGSTGLGQGGGFP
Sbjct: 1 MQVPSTTLLLLACCTWYSCRGWLLPRPVIAPSAFRRRGNGNCFSPHYQDPAAMLSQPRHRAARTTLHLWKAWGLGGNNGTASSHEGKGDKAEMKNEGAAKDSEDDVEEDDDDMDSQALLGDSGADEDSIIIDGIDDDEDEFLHGNRKNAEVPRGTKSGLEKTESGRFASAYTISPTASGSPPTFPDTGSMESTTVKQLTEKSLAQSDENSFFDGFEGFAGRRVSYSSQPKARHNIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMFLREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKARQPPVGSLEGTLTVVPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFGSTGLGQGGGFP 503
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|676394227|ref|XP_009040391.1| (hypothetical protein AURANDRAFT_70357 [Aureococcus anophagefferens] >gi|323448941|gb|EGB04833.1| hypothetical protein AURANDRAFT_70357 [Aureococcus anophagefferens]) HSP 1 Score: 91.6633 bits (226), Expect = 1.081e-16 Identity = 85/271 (31.37%), Postives = 127/271 (46.86%), Query Frame = 0
Query: 234 NIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGM---FLREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSL-------------NMKKKARQPPVGSLEGTLTVVPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATE-EDQAQQ 487
N ++I +P +I G+ +A RVQ+A+ + + LLG F ++ +LANL F+LQ+ GYMF NA+ +S S SL + + PPV +GT+TV K+ G V + A + L EV LR E+D R + Q +LL +IR+LPE+Q S+T D VLD M+KLV ++ + + T + N +L S A+LC+ Q+V GY L E DQ Q+
Sbjct: 85 NRYYKIVASLAPSDII----GRFAATAPPRVQDAVKQTIMGLLGNAGGFA----LETATITTSEKLANLMFQLQMTGYMFKNAEYRVSLSQSLADVPALPPGDLEEDAPDASAPPPV---QGTVTV---------------KL-GVEEVRVDADAYMAELRDEVATLRRELDEVEEERRLASQKDLLAYIRALPEQQMASMTSEITDDVLDGMKKLV-YSIMKGMGTSNVEAN---TLLQQSGSAMAQLCMWQLVIGYNLRELEVRDQLQK 324
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|873231697|emb|CEM07546.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 90.8929 bits (224), Expect = 2.641e-16 Identity = 89/272 (32.72%), Postives = 126/272 (46.32%), Query Frame = 0
Query: 234 NIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMFLREPDF--QSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKARQPPVGSLEGTLTV-----------------VPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREA--SRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLA---LARAIPTVGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATE 481
N F++ + SP E+ + +A +RVQ+A +T+LG+ P + ++ + G +LANL F+LQ+ GYM NA+ LS + SL K P G EG L V G L +GE + + A E L L EV L EE+ AR A+EA RQ +LL +I+SLPE Q RSLTE+ + VLD M+KL + L P Q + + S A+LC+ Q+ GY L E
Sbjct: 88 NPYFDVVSRLSPNELV----ARFVQTAPKRVQDAAR---TTVLGLLGSIPKYALETTILTTGEKLANLMFQLQMTGYMLKNAEYRLSLAESL--KNVPATVPTGIKEGELAAAAAAAPTASPASLAAPAVSGHIQLHLANGEA--------IEVAASEYLAELRSEVRELEEEL--ARKAKEAQPKRQDDLLNYIKSLPEAQMRSLTENINEEVLDAMKKLTHVVVEGLGGGSPAPMGQGD---VITQQTGSAMAQLCMWQLSIGYNLRELE 337
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|1210531122|dbj|GAX10223.1| (hypothetical protein FisN_3Lh420 [Fistulifera solaris]) HSP 1 Score: 90.5077 bits (223), Expect = 7.087e-16 Identity = 83/282 (29.43%), Postives = 138/282 (48.94%), Query Frame = 0
Query: 227 SQPKARHNIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMF--LREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKAR-------------QPPVGSLEGTLTVVPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGN-QWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFG 492
SQ + +N + SP E+ + + RVQ A+ ST+LG+ L + F + G +LA+L F+LQ+ GYMF NA+ LS S +++ K + P G + G L V + N+ S + G + + A+ + L EVE LR+E+ AR +E + + +LL +IR+LPE++ RSLT + + VL M+ LV+ L+ +G+ Q P + G+++ A+LC+ Q+ GY L + E + + L G
Sbjct: 144 SQKQLENNPYMAVVTNLSPSELI----SKFTSTTPPRVQNAVK---STILGLIGGLPKMAFDTTTITSGQRLASLMFQLQMTGYMFKNAEYKLSLSQAIDDGDKGKFLLNGIENDNEEASPLQGKVRGKLRVKYVRKENLEASVVDDSTGG---IEVDAEAYMSELRSEVERLRDELTIARKTKEETIRKDLLLYIRTLPEKELRSLTSTMSEDVLIAMKGLVNAVLS----GIGDGQIGPTTITEQSGEAM-AQLCLWQLAIGYNLRSLEVREEMKKSLAG 410
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|1210518826|dbj|GAX22372.1| (hypothetical protein FisN_3Hh420 [Fistulifera solaris]) HSP 1 Score: 90.1225 bits (222), Expect = 1.049e-15 Identity = 82/282 (29.08%), Postives = 137/282 (48.58%), Query Frame = 0
Query: 227 SQPKARHNIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMF--LREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKAR-------------QPPVGSLEGTLTVVPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGN-QWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFG 492
+Q + +N + SP E+ + + RVQ A+ ST+LG+ L + F + G +LA+L F+LQ+ GYMF NA+ LS S +++ K + P G + G L V + N S + G + + A+ + L EVE LR+E+ AR +E + + +LL +IR+LPE++ RSLT + + VL M+ LV+ L+ +G+ Q P + G+++ A+LC+ Q+ GY L + E + + L G
Sbjct: 144 TQKQLENNPYMAVVTNLSPSELI----SKFTSTTPPRVQNAVK---STILGLIGGLPKMAFDTTTITSGQRLASLMFQLQMTGYMFKNAEYKLSLSQAIDDGDKGKFLLNGVENDNEEANPLQGKVRGKLRVKYVRKENSEASVVDDSTGG---IEVDAEAYMSELRSEVEKLRDELTVARKTKEETIRKDLLLYIRTLPEKELRSLTSTMSEDVLVAMKGLVNAVLS----GIGDGQIGPTTITEQSGEAM-AQLCLWQLAIGYNLRSLEVREEMKKSLAG 410
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|551676735|ref|XP_005841121.1| (hypothetical protein GUITHDRAFT_150165 [Guillardia theta CCMP2712] >gi|428185288|gb|EKX54141.1| hypothetical protein GUITHDRAFT_150165 [Guillardia theta CCMP2712]) HSP 1 Score: 88.5817 bits (218), Expect = 1.393e-15 Identity = 79/261 (30.27%), Postives = 123/261 (47.13%), Query Frame = 0
Query: 234 NIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMFLREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKARQPPVGSLEGTLTVVPGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLAL--ARAIPTVGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFG 492
N E+ SP E+ GQ +AS RVQ A+ + LLG P F + + +A+L F+L++ GYMF NA+ LS SL PP S+E T P + + + +GK + + A + L REV+ L+ E+ + + ++L F++ L ++ +SLT S VLD MRKLVD + A P++ N+ + +P S A+LC+ Q+V GY L E + +L G
Sbjct: 110 NPYVEMLESISPGEMV----GQFMATASPRVQTAVKNTIMGLLGSLRASPAFDASIVTTQRAMASLMFQLEMTGYMFRNAEYRLSLQKSL----LEALPP--SIEEEKTPSPSVKGKITVTMPDGK-----EIEVDANAYVSELSREVKQLKSELLSLQKQNDMDEVQDILGFVQRLDNKEMQSLTSSVSPEVLDAMRKLVDTVIKGMGADPSLMNE-GIEIITEVPA-STLAQLCMWQLVVGYNLREMEAREELNKRLPG 353
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|223999129|ref|XP_002289237.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974445|gb|EED92774.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 87.8113 bits (216), Expect = 4.867e-15 Identity = 83/290 (28.62%), Postives = 140/290 (48.28%), Query Frame = 0
Query: 223 VSYSSQPKARHNIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMF--LREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSL---------NMKKKARQPPVGSLEGTLTVVPGG----------RTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALA---------RAIPTV-GNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATE 481
++ S QP N+V + +P ++ + +AS RVQ+A+ +T+LG+ L + F++ G +LA+L +LQL GYMF NA+ LS S SL + K+ R+ ++G + V GG + E + + A+ + L +V LREE+D ++ ARE + +LL +IR+LPE++ + LT + VL+ M+ LV LA ++P V GN+ P + G+++ A+LC+ Q+V G+ L E
Sbjct: 102 LARSKQPNPYLNVVSRL----TPSDLIARFTA----TASPRVQDAVR---TTILGLIGGLPQMAFETKTIATGERLASLMMQLQLTGYMFKNAEYRLSLSQSLGSNSLLLGGDTDKEWREGK--RVKGKIRVRYGGDMNSTNSSSSTAAITQDTETAVSSPGMEIEVDAQSYMSELRTQVSRLREELDASKQAREEEIRKDLLLYIRTLPEKELKELTGTMSPEVLEAMKGLVTAVLAGISDDGDAGTSVPGVSGNKIMPDTVTEQSGEAL-AQLCMWQLVVGFNLRELE 377
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|219110537|ref|XP_002177020.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411555|gb|EEC51483.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 87.8113 bits (216), Expect = 6.182e-15 Identity = 82/272 (30.15%), Postives = 124/272 (45.59%), Query Frame = 0
Query: 259 SASRRVQEAINEQVSTLLGMFLREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKARQPPV-------------------------GSLEGTLTV-VPGGRTNVLGSGE-EGKMEGARNVTM--GAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPT-VGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATEEDQAQQLKLFGSTGLGQGG 500
+A RVQ A+ + V L+G L + F++ G +LA+L F+LQ+ GYMF NA+ LS SL + + P G + G L + PG N L E + ++ + + M A + L EV LR+E+ R A+E + + +LL +IR+LPE++ RSLT + VL M+ LV +A+ T +G V A+LC+ Q+ GY L E + + L GST GQ G
Sbjct: 177 TAHPRVQNAVRQTVLGLIG-GLPKMAFETTTITTGQRLASLMFQLQMTGYMFKNAEYRLSLQQSLGLDGHSVNPSTERLLSAVDDEGSDDDNDDTQMDTLKGKIRGKLRIRYPGSMKNTLDDPENQNDVDNSNGLQMEVDAAAYMSELRSEVSQLRDELKITRSAKEDALRKDLLLYIRTLPEKELRSLTNTMGPDVLVAMKGLV-----KAVMTGIGEDEIGPETVTEQSSEAMAQLCMWQLAIGYNLRTLEVREEMKKSLKGSTVGGQDG 442
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|298710220|emb|CBJ26295.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 83.9593 bits (206), Expect = 5.358e-14 Identity = 78/268 (29.10%), Postives = 125/268 (46.64%), Query Frame = 0
Query: 234 NIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMFLREPDFQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKKKARQPPVGSL-------------------EGTLTVV-PGGRTNVLGSGEEGKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGNQWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATE 481
N +++ R+ SP E+ G+ ++S +VQEA+ V LLG R F++ G LANL F+LQ+ GYMF NA+ LS SS M+ A P S+ +G L + P + + +E K E R + + A + L +VE L ++ + +E + Q +LL +I+S+PE Q + LT VL+ MR LV+ + +G++ + S A+LC+ Q+V G+ L E
Sbjct: 99 NPYYDVVRRLSPTELI----GRFMKTSSPKVQEAVRTTVLGLLGSLPRHA-FETTAIATGDALANLMFQLQMTGYMFKNAEYRLSLQSS--MRASAALPAGKSIVGEEEEDESLSTSRVEMDDDGNLIIARPKISGKIKLTYDENK-ETERAMEVDADAYMAELRGQVEQLESQLLMVQTQKEEAVQQDLLVYIKSMPEHQLQGLTAGVSPDVLESMRLLVETVMG----GMGDREILSKTLTQQTGSGMAQLCMWQLVVGFNLREME 354
BLAST of EWM30178.1 vs. NCBI_GenBank
Match: gi|1072224536|gb|OEU09286.1| (hypothetical protein FRACYDRAFT_195450 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 81.2629 bits (199), Expect = 9.992e-13 Identity = 83/307 (27.04%), Postives = 141/307 (45.93%), Query Frame = 0
Query: 233 HNIVFEIWRQRSPEEIAILYKGQHQYSASRRVQEAINEQVSTLLGMFLREPD--FQSHLQIQGGQLANLFFKLQLMGYMFANADKVLSASSSLNMKK-----------------KARQPPV-GSLEGTLTV------------VPGGRTNVLGSGEE---------GKMEGARNVTMGAKELLGSLVREVEALREEVDRARVAREASRQGNLLTFIRSLPEEQQRSLTESAPDYVLDCMRKLVDLALARAIPTVGN-QWNPKSPVLIPGKSIFAELCIMQVVQGYLLAATE--EDQAQQLK-LFGST 494
N ++ + SP ++ + + + RVQEA+ +T+LG+ P F++ G +LA+L F+LQ+ GYMF NA+ LS S SL M + K P V G ++G L + P TNV ++ +G + + A + L EV LR++++ + ++ + + +LL +IR+LP ++ +SLT + VL CM+ LV LA +G+ + P + G+++ A+LC+ Q+ GY L E E+ + LK L G T
Sbjct: 185 KNPYMQVVSKISPSDLIAKFTAE----SDPRVQEAVR---TTILGLIGSLPKLAFETTSITTGQRLASLMFQLQMTGYMFKNAEYRLSMSQSLGMTQDISSNLLLSGSEKELLDKDDDPLVSGKIKGKLKIRYGKKKDDKDKATPTKPTNVADENDKVASSTSSSETAEDGGMEIEVDAAAYMSELRAEVSKLRDDLEETKETKDEALRKDLLLYIRTLPGQELKSLTNTMSQDVLVCMKGLVQAVLA----GIGDGKIGPDTVTEQSGEAM-AQLCMWQLAVGYNLRELEVREEMKKNLKSLTGDT 479 The following BLAST results are available for this feature:
BLAST of EWM30178.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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