rna50, rna50 (mRNA) Nannochloropsis gaditana

Overview
Namerna50
Unique Namerna50
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length450
Alignment locationCM002455.1:147045..148336 -

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Properties
Property NameValue
Productdisulfide isomerase
Orig transcript idgnl|cribi|Naga_100671g2.1376.mrna
Orig protein idgnl|cribi|Naga_100671g2.1376
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:147045..148336 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100671g2gene48Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna50rna50-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30622.1cds50Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna50 ID=rna50|Name=rna50|organism=Nannochloropsis gaditana|type=mRNA|length=450bp
ATGTCTTGGGGTGGCTGGATGCCCAACTTCGGCATCGGCAAGGACAACCT
GCCTTCCTTCTTCGTCCTGGATTTTCCCTCTCAGAAGCACTGGGTCTTGG
AGGCAAAGGGAGGACTGCGGGTGTGGGCGACGCAGGAAGTGGCCGAGGAT
ACGCTGGCTGCTTTCTTAGTGGATGTGGTGGAGGGGAAGGTCCCTGCCAA
ACAGCCAGGCCTCTTGGGGGGGATGCCTGCTGCCATTTGGACCCGCGTGG
TGGACCTGTGGCCGTGGTCGCTCGCCCTTCTTCTCCCGCTTGGATGGATT
TTTGCCGCTTGTCTGGGTGGCATTGCCGTTGTGGATAAGGAAGAGGAGGA
GCTGCGGGGGGAGGGGGAAGGGGAAAGACCTGTGGGGGACGCGGGAGAGG
ACGACAGACTTGGAGCAGGGAAAGCCGCGGTGTCCAAGAAGGAAGACTGA
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protein sequence of rna50

>rna50-protein ID=rna50-protein|Name=rna50|organism=Nannochloropsis gaditana|type=polypeptide|length=245bp
MRSPSSSKLPFFVFLFFSSSLLFWGAPLPLSVAIDHADLTAGNVVTLTQD
NFREHVEDGNTWLVDFYAPWCGHCVRLNPVLDEVAAAVGDKLRIGKVDAT
IHTRLAKQFGISGYPSLKIFQPPSKEGEEVAGSVSNYDGARTPEALTTLA
VRLSAPALAHLPTPEALAGFLRSLQNASVGFVLGRVGEGGRAGRGEDGTE
EGREGEEQVFEQVARALKVKASFGSVGKEALEKGKGRELFRYAEP
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mRNA from alignment at CM002455.1:147045..148336-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna50 ID=rna50|Name=rna50|organism=Nannochloropsis gaditana|type=mRNA|length=1292bp|location=Sequence derived from alignment at CM002455.1:147045..148336- (Nannochloropsis gaditana)
ATAGGGCATTCAACTGTTGCTGTACGACACCGTGAGAACAACTAAAACGC
GCACAAACGAGCGGGCGTCGACTTGCATTCCCTTCCTGCGCCTCCGCGAA
GAAGGATGCGTTCTCCCTCCTCCTCCAAGTTACCCTTCTTCGTCTTTCTC
TTCTTCTCCAGCTCTCTTCTTTTTTGGGGTGCTCCCCTTCCCCTATCTGT
TGCGATTGACCATGCAGATTTGACCGCTGGCAATGTGGTCACGCTCACTC
AAGATAATTTTCGGGAGCATGTGGAAGATGGGAATACTTGGCTTGTGGAT
TTTTACGCGCCCTGGTACTCAACTCTTGTCCTTGTCTTAAAGCGTATTTT
TGTCTACGTGTGTGGTTTCTCCTTCTTATGTCTTGTCACACTCCGGATAT
CCTAGGTGTGGTCATTGTGTCCGGCTAAATCCCGTCCTCGACGAAGTGGC
CGCTGCAGTCGGGGACAAACTCCGGATTGGGAAGGTAGGTGTGGCTTTCA
CTATTCCAGCCCTTTCCCCTTTTGTTCCGGATCAGCACCTCCCGGACATC
CTCAACAGTCTCTTTTAGTAATTTTAGACTTATGTGCCGAGCCCTCGCTC
TTCCTCAGCCAAGGCTTTCTTTCACCCTTGCCCCCCTTCTCTCCCTGTTA
CCCACAACGCATGTTCTCACTCATCCCCATCCCTTGCAATCCCCCCAGGT
CGACGCCACGATCCACACACGACTTGCCAAACAATTTGGAATTAGTGGGT
ATCCTTCGCTGAAGATTTTTCAACCGCCCTCGAAGGAGGGAGAGGAGGCA
AGGGCTTTCCACGCACCTCCGCTTCGCTTTCACCCTGTCCCTGCTGCCGT
TACCTTCTTCCTCACGCTGCCCTTCCCTCCTTCCCTCCCTCCCTTCCTCC
CACTTTTCCTCCCTCTCTCCCCAGGTGGCCGGCTCGGTCAGTAATTATGA
TGGTGCTCGCACTCCCGAGGCTCTGACCACCCTCGCCGTCCGCCTCTCTG
CCCCGGCCTTGGCCCATTTACCGACGCCGGAGGCGCTCGCTGGCTTTCTG
CGCTCGTTGCAGAACGCCAGCGTGGGCTTCGTCTTGGGACGGGTCGGGGA
GGGCGGTAGAGCGGGGCGAGGGGAGGACGGGACGGAGGAAGGGAGGGAGG
GAGAGGAGCAGGTGTTCGAGCAGGTGGCACGGGCCTTGAAAGTAAAAGCC
TCGTTCGGGAGCGTGGGGAAGGAGGCGCTTGAGAAAGGGAAGGGGCGGGA
ATTGTTCAGGTACGCAGAACCGTAGAAAAGCCAGGGGGCAAG
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Coding sequence (CDS) from alignment at CM002455.1:147045..148336-

>rna50 ID=rna50|Name=rna50|organism=Nannochloropsis gaditana|type=CDS|length=2952bp|location=Sequence derived from alignment at CM002455.1:147045..148336- (Nannochloropsis gaditana)
GTGGCCGGCTCGGTCAGTAATTATGATGGTGCTCGCACTCCCGAGGCTCT
GACCACCCTCGCCGTCCGCCTCTCTGCCCCGGCCTTGGCCCATTTACCGA
CGCCGGAGGCGCTCGCTGGCTTTCTGCGCTCGTTGCAGAACGCCAGCGTG
GGCTTCGTCTTGGGACGGGTCGGGGAGGGCGGTAGAGCGGGGCGAGGGGA
GGACGGGACGGAGGAAGGGAGGGAGGGAGAGGAGCAGGTGTTCGAGCAGG
TGGCACGGGCCTTGAAAGTAAAAGCCTCGTTCGGGAGCGTGGGGAAGGAG
GCGCTTGAGAAAGGGAAGGGGCGGGAATTGTTCAGGTACGCAGAACCGTA
GGTCGACGCCACGATCCACACACGACTTGCCAAACAATTTGGAATTAGTG
GGTATCCTTCGCTGAAGATTTTTCAACCGCCCTCGAAGGAGGGAGAGGAG
GTGTGGTCATTGTGTCCGGCTAAATCCCGTCCTCGACGAAGTGGCCGCTG
CAGTCGGGGACAAACTCCGGATTGGGAAGATGCGTTCTCCCTCCTCCTCC
AAGTTACCCTTCTTCGTCTTTCTCTTCTTCTCCAGCTCTCTTCTTTTTTG
GGGTGCTCCCCTTCCCCTATCTGTTGCGATTGACCATGCAGATTTGACCG
CTGGCAATGTGGTCACGCTCACTCAAGATAATTTTCGGGAGCATGTGGAA
GATGGGAATACTTGGCTTGTGGATTTTTACGCGCCCTGGTGGCCGGCTCG
GTCAGTAATTATGATGGTGCTCGCACTCCCGAGGCTCTGACCACCCTCGC
CGTCCGCCTCTCTGCCCCGGCCTTGGCCCATTTACCGACGCCGGAGGCGC
TCGCTGGCTTTCTGCGCTCGTTGCAGAACGCCAGCGTGGGCTTCGTCTTG
GGACGGGTCGGGGAGGGCGGTAGAGCGGGGCGAGGGGAGGACGGGACGGA
GGAAGGGAGGGAGGGAGAGGAGCAGGTGTTCGAGCAGGTGGCACGGGCCT
TGAAAGTAAAAGCCTCGTTCGGGAGCGTGGGGAAGGAGGCGCTTGAGAAA
GGGAAGGGGCGGGAATTGTTCAGGTACGCAGAACCGTAGGTCGACGCCAC
GATCCACACACGACTTGCCAAACAATTTGGAATTAGTGGGTATCCTTCGC
TGAAGATTTTTCAACCGCCCTCGAAGGAGGGAGAGGAGGTGTGGTCATTG
TGTCCGGCTAAATCCCGTCCTCGACGAAGTGGCCGCTGCAGTCGGGGACA
AACTCCGGATTGGGAAGATGCGTTCTCCCTCCTCCTCCAAGTTACCCTTC
TTCGTCTTTCTCTTCTTCTCCAGCTCTCTTCTTTTTTGGGGTGCTCCCCT
TCCCCTATCTGTTGCGATTGACCATGCAGATTTGACCGCTGGCAATGTGG
TCACGCTCACTCAAGATAATTTTCGGGAGCATGTGGAAGATGGGAATACT
TGGCTTGTGGATTTTTACGCGCCCTGGTGGCCGGCTCGGTCAGTAATTAT
GATGGTGCTCGCACTCCCGAGGCTCTGACCACCCTCGCCGTCCGCCTCTC
TGCCCCGGCCTTGGCCCATTTACCGACGCCGGAGGCGCTCGCTGGCTTTC
TGCGCTCGTTGCAGAACGCCAGCGTGGGCTTCGTCTTGGGACGGGTCGGG
GAGGGCGGTAGAGCGGGGCGAGGGGAGGACGGGACGGAGGAAGGGAGGGA
GGGAGAGGAGCAGGTGTTCGAGCAGGTGGCACGGGCCTTGAAAGTAAAAG
CCTCGTTCGGGAGCGTGGGGAAGGAGGCGCTTGAGAAAGGGAAGGGGCGG
GAATTGTTCAGGTACGCAGAACCGTAGGTCGACGCCACGATCCACACACG
ACTTGCCAAACAATTTGGAATTAGTGGGTATCCTTCGCTGAAGATTTTTC
AACCGCCCTCGAAGGAGGGAGAGGAGGTGTGGTCATTGTGTCCGGCTAAA
TCCCGTCCTCGACGAAGTGGCCGCTGCAGTCGGGGACAAACTCCGGATTG
GGAAGATGCGTTCTCCCTCCTCCTCCAAGTTACCCTTCTTCGTCTTTCTC
TTCTTCTCCAGCTCTCTTCTTTTTTGGGGTGCTCCCCTTCCCCTATCTGT
TGCGATTGACCATGCAGATTTGACCGCTGGCAATGTGGTCACGCTCACTC
AAGATAATTTTCGGGAGCATGTGGAAGATGGGAATACTTGGCTTGTGGAT
TTTTACGCGCCCTGGTGGCCGGCTCGGTCAGTAATTATGATGGTGCTCGC
ACTCCCGAGGCTCTGACCACCCTCGCCGTCCGCCTCTCTGCCCCGGCCTT
GGCCCATTTACCGACGCCGGAGGCGCTCGCTGGCTTTCTGCGCTCGTTGC
AGAACGCCAGCGTGGGCTTCGTCTTGGGACGGGTCGGGGAGGGCGGTAGA
GCGGGGCGAGGGGAGGACGGGACGGAGGAAGGGAGGGAGGGAGAGGAGCA
GGTGTTCGAGCAGGTGGCACGGGCCTTGAAAGTAAAAGCCTCGTTCGGGA
GCGTGGGGAAGGAGGCGCTTGAGAAAGGGAAGGGGCGGGAATTGTTCAGG
TACGCAGAACCGTAGGTCGACGCCACGATCCACACACGACTTGCCAAACA
ATTTGGAATTAGTGGGTATCCTTCGCTGAAGATTTTTCAACCGCCCTCGA
AGGAGGGAGAGGAGGTGTGGTCATTGTGTCCGGCTAAATCCCGTCCTCGA
CGAAGTGGCCGCTGCAGTCGGGGACAAACTCCGGATTGGGAAGATGCGTT
CTCCCTCCTCCTCCAAGTTACCCTTCTTCGTCTTTCTCTTCTTCTCCAGC
TCTCTTCTTTTTTGGGGTGCTCCCCTTCCCCTATCTGTTGCGATTGACCA
TGCAGATTTGACCGCTGGCAATGTGGTCACGCTCACTCAAGATAATTTTC
GGGAGCATGTGGAAGATGGGAATACTTGGCTTGTGGATTTTTACGCGCCC
TG
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Synonyms
Publications