|
|
Properties
| Property Name | Value |
|---|
| Product | n-terminal domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100279g2.10050.mrna |
| Orig protein id | gnl|cribi|Naga_100279g2.10050 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:857189..860001 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4991 ID=rna4991|Name=rna4991|organism=Nannochloropsis gaditana|type=mRNA|length=795bp
ATGAATGCAGACCTACAGGCTGCTGGTCTCCGGGAGGTAGCTCCTGCGCC
GGTATCGAACCTTCCAGAAGCTGTCGGGGACGTCGACGTGCGGGCCCTGT
TGGAGGAGGAGGAGGACGAGGAGGAGGACGAGGAGGAGGACGAGGACAAG
GAGGAGGACGAGGACGAGGAGGGGAACGGAAGGGGGGAGAAGGAGGGCGG
AAGGGGGCATGAGGGGCTACTGAGGGGAAGGAGGAGGAGGGTACATGGAG
AGAAGGAGGGTTCGGGGCCGAGAGAGGAGGATGACGACTTGGCACTCCTC
TTGGCTACATCGGGCGAGGTACAGGATGAGGAAGGGAAGGAGGGCGTGGA
AGAGGAGGACAGGGAGGAAGAGGAGGGAGGGGGGGAGGACGAGGATTTGG
CCTTCCTCTTGAGCCTGGGGGAGGCGCATGGAAAGGAGGAGGAGGAGGAG
GAGGAGGAGGGAGGAGGCGTGTGCCTTCCTCCCCCTGCGCGTCTCCATGC
CGCCTCGCATGCAGAGGAGGAAAAGGTAAAGGCTAGGTGTGCGTGGCAAG
AAAGCGACCCGGATTTAGGAGACGTTGGGATGCCTGAAGAAGGAGCGGCG
GATGCGAAGATTTGTGGGAGGCTCACGCGGTTGAATCGGTCGGGCAGGAA
GGAGGGCGGGAGGGAGGGCGGAAGGGAGGGCGGGAGGGAGGAAGGGGTCT
GGAAGCTCCGGTTAGAGGATTGCTTTCTATGGACTCCGGACCGGGAGGTG
TTGTTTGAACGCGTCGACTTTCGTGTAAAGCAGAACTTCACGTAG back to topprotein sequence of rna4991 >rna4991-protein ID=rna4991-protein|Name=rna4991|organism=Nannochloropsis gaditana|type=polypeptide|length=629bp
MRKGRMAAPLAHTPPFPAAQYPCANEGGGGQDGNSANNLPYFGQHTDLNS
AEYCKRQRVYMSPGLWAELDADPQRGVALMDLAAAQQAQEAEQFRLRQQQ
QPQREPQGHDGSKGGYLEAQRGHMQHAWVAEGAGETAMDTGDEGRDKEED
VARFFADSPPAATATRADFPSTRTNISTTGQARAQDDWPMPTPPLPPKSG
RSGMEPSREELSAPPPGGHIRSSKTTDDVVSTIYRPLLMTGTTPNSTSSI
FCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPL
PVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSP
ECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSS
FSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLL
EQESISRDFPLKPMTIWQARKLELCSDSFGLCIRQASSNLSPVSANGSSS
NSSHRSSVGSSAAAKATGSLPQPHSPVGPFAPGERATAAGGPLRGIPALM
ASSTSVLPTPPSSHSLAARHASSISTASSSTASSSSRFRKPRPVTSDLAR
RSPWTPLPQSPSPTYEDITYTPKGRYVQS back to topmRNA from alignment at CM002464.1:857189..860001- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4991 ID=rna4991|Name=rna4991|organism=Nannochloropsis gaditana|type=mRNA|length=2813bp|location=Sequence derived from alignment at CM002464.1:857189..860001- (Nannochloropsis gaditana)
ACCCATTTTACGTTGCGCGCGGCCGCCTTCCTCCCTCGGTGTTCACACGA
TTTCTCGTCTTGTCGTATTGCAGGAACAACGGACGATCTGACGGGGTCTC
TTTGTCTGTGCACGGGGTACAAGACACCTTTTATGGCGAAAAGCTCGGCT
TCCTACTTTGGCACCACAGAAGGAAGGAGGTGCCCGCCGCTGGCACGACG
GGACTGCTTGTAAAATCGACGTTTAGCGCCATCCTTGGAGCATAAGACCA
CGAAACTCTCTAAAATAGCATTGATTTAAGCAATTATATTTGATGCGGAA
GGGAAGGATGGCCGCACCTTTGGCACATACGCCGCCTTTTCCGGCGGCTC
AATATCCATGTGCCAACGAAGGAGGTGGAGGCCAAGACGGCAATTCTGCG
AACAATTTACCATACTTCGGACAGCACACGGATTTAAATAGTGCAGGTAC
GACGCATAGTGCTCGATAGAGTTGAAAGGGGATGAGGAGGGCCAGAACGC
GTCAGTGGAAGGAAGAACTGTGGTGGTATTCTGGCTGATCCTCGTTTTGA
AGCCTCCCCTCTCACATTTCTTCTTCCCATGTGGTGCCAACACAGAATAT
TGCAAAAGACAACGTGTGTACATGAGCCCAGGTCTGTGGGCGGAGCTTGA
CGCGGACCCACAGCGGGGAGTGGCCTTGATGGACTTGGCGGCGGCTCAAC
AAGCACAAGAAGCTGAGCAGTTCCGGCTCCGACAGCAACAACAACCACAG
CGAGAGCCACAAGGACACGACGGATCAAAAGGTGGTTATTTAGAAGCGCA
GCGAGGGCACATGCAGCATGCCTGGGTGGCGGAAGGGGCAGGGGAGACGG
CCATGGACACGGGCGACGAAGGGAGGGACAAGGAGGAGGACGTGGCCCGT
TTTTTTGCCGATTCTCCGCCAGCAGCCACCGCCACCCGCGCCGACTTTCC
TTCGACACGTACAAATATCTCCACGACCGGCCAGGCCAGGGCGCAGGACG
ATTGGCCCATGCCCACCCCGCCCTTACCCCCCAAGAGTGGACGGAGCGGG
ATGGAGCCCTCTAGGGAAGAGCTCTCGGCGCCCCCCCCCGGGGGTCACAT
TAGGAGCAGCAAAACCACGGACGACGTGGTCTCGACAATCTACCGTCCTT
TGCTCATGACGGGCACCACACCCAACTCGACCAGTTCCATTTTCTGCCGC
AACACCGCCTGTAACCCCCACGCGGACCAGATCATCTTGTGCATGGCGAG
CGTCCTCCAAGTACAAATGCTGCACGACAAGGAGGCCGCCAACACCAACC
AGGCGCTGCGGGACAAGTTTCGGTGTTTCGAGCCCCCCCTTCCTGTGGCC
ACAGGGGAGGCAGGCAGCGGGGAGGGCGTGGTGGCCATGGAAGGTCAGGG
GCCCACGGAGAGTCAAGGAGAAGAGGAGGTGACGGTGGAGGAGATCCACT
GTTTCATCGAAGGTATCTTCAAGCGGGCGCGTTTCTCGCCCGAATGCAAC
ATCATTGCCTTGGTTTACATCAATCGGGTCATATCCACGACTTCTTTACC
CTTGCACGCCCGTAACTGGCGGGCGGTGGTGCTGGTCGCTCTTCTCCTCG
CGCAGAAAGTGTGGGACGACCGTTGCATCGCCCTCTCTTCTTTCTCCCCG
CATTTGCCCGATTTCCCCCTCGAACGGATCCGTTTGGTGGAGCGGAAATT
TCTGGAGCTGCTCCAGTACCGAGCCACGGTCACCCAGGCCCTCTACACGC
GCTACTACTTCGAACTCCGGGCTTTGTTCGAGAAGCTTCTGGAACAAGAA
AGCATCTCACGAGACTTTCCCCTTAAGCCCATGACCATTTGGCAGGCGCG
CAAGCTGGAGCTGTGCTCGGATTCTTTTGGTCTTTGCATCCGTCAAGCCT
CCAGCAACCTCTCGCCGGTTTCGGCCAATGGGAGCAGCAGCAACAGCAGC
CACCGCTCCTCGGTCGGTTCGTCCGCCGCTGCCAAGGCGACGGGATCCCT
CCCTCAACCGCACAGCCCCGTCGGTCCCTTCGCGCCCGGGGAGAGGGCCA
CGGCGGCAGGGGGGCCCTTACGAGGGATTCCCGCCCTGATGGCTTCCTCT
ACCTCTGTCCTCCCCACCCCGCCCAGCTCCCATTCCCTCGCCGCCCGCCA
CGCTTCCTCCATTTCGACCGCCTCCTCCTCCACTGCCTCCTCCTCGTCCC
GGTTTCGAAAACCACGACCCGTGACCTCGGACTTGGCGCGCCGCTCGCCG
TGGACCCCGCTGCCACAGTCTCCGTCCCCGACCTACGAAGACATCACGTA
CACACCCAAAGGCCGCTATGTGCAGAGCTAGGCAGGGGGAGGACGGAATA
TCCAGGGCGAGGTAATGACCGGAAGGCACCAGGCAAGGAAGGATGGATTG
GACAGGAAGGGGGGATGGGTGTACAGGATGTGTGCTGTGAATGGTAACGG
GATTTCGGGGTTACGGAATTTCGGATGTTTGAAGAGCGACTCTTCAAGGT
AATGCCGAGCGGGGGATTTGCTTCGAGGGTCCGTTCCATGCGATATAAAA
TGTAGAAAAGGGTGACAAAGAGAAAGAGGTATCATAAAAGAGCTGTTGGG
GATGCAAGAAGGGGTTGAGGGGGGGCGACCCGACTCCCGCATAGTGGACC
GAGACAGAAACAAAGATTGGAGGGATGGGGCGTGAAAGTGCCGCTTCAAT
GATGGAGCGGGGGAGGAAACGTATTAGAGGGGAAAGGATTGTACCTGAAA
AGCGGGAGCGGAGGGGAGGCCACTGACAGCGTCGCAGTGGGACGAAGGCT
GGAAAGGAGGAGG back to topCoding sequence (CDS) from alignment at CM002464.1:857189..860001- >rna4991 ID=rna4991|Name=rna4991|organism=Nannochloropsis gaditana|type=CDS|length=3780bp|location=Sequence derived from alignment at CM002464.1:857189..860001- (Nannochloropsis gaditana)
AATATTGCAAAAGACAACGTGTGTACATGAGCCCAGGTCTGTGGGCGGAG
CTTGACGCGGACCCACAGCGGGGAGTGGCCTTGATGGACTTGGCGGCGGC
TCAACAAGCACAAGAAGCTGAGCAGTTCCGGCTCCGACAGCAACAACAAC
CACAGCGAGAGCCACAAGGACACGACGGATCAAAAGGTGGTTATTTAGAA
GCGCAGCGAGGGCACATGCAGCATGCCTGGGTGGCGGAAGGGGCAGGGGA
GACGGCCATGGACACGGGCGACGAAGGGAGGGACAAGGAGGAGGACGTGG
CCCGTTTTTTTGCCGATTCTCCGCCAGCAGCCACCGCCACCCGCGCCGAC
TTTCCTTCGACACGTACAAATATCTCCACGACCGGCCAGGCCAGGGCGCA
GGACGATTGGCCCATGCCCACCCCGCCCTTACCCCCCAAGAGTGGACGGA
GCGGGATGGAGCCCTCTAGGGAAGAGCTCTCGGCGCCCCCCCCCGGGGGT
CACATTAGGAGCAGCAAAACCACGGACGACGTGGTCTCGACAATCTACCG
TCCTTTGCTCATGACGGGCACCACACCCAACTCGACCAGTTCCATTTTCT
GCCGCAACACCGCCTGTAACCCCCACGCGGACCAGATCATCTTGTGCATG
GCGAGCGTCCTCCAAGTACAAATGCTGCACGACAAGGAGGCCGCCAACAC
CAACCAGGCGCTGCGGGACAAGTTTCGGTGTTTCGAGCCCCCCCTTCCTG
TGGCCACAGGGGAGGCAGGCAGCGGGGAGGGCGTGGTGGCCATGGAAGGT
CAGGGGCCCACGGAGAGTCAAGGAGAAGAGGAGGTGACGGTGGAGGAGAT
CCACTGTTTCATCGAAGGTATCTTCAAGCGGGCGCGTTTCTCGCCCGAAT
GCAACATCATTGCCTTGGTTTACATCAATCGGGTCATATCCACGACTTCT
TTACCCTTGCACGCCCGTAACTGGCGGGCGGTGGTGCTGGTCGCTCTTCT
CCTCGCGCAGAAAGTGTGGGACGACCGTTGCATCGCCCTCTCTTCTTTCT
CCCCGCATTTGCCCGATTTCCCCCTCGAACGGATCCGTTTGGTGGAGCGG
AAATTTCTGGAGCTGCTCCAGTACCGAGCCACGGTCACCCAGGCCCTCTA
CACGCGCTACTACTTCGAACTCCGGGCTTTGTTCGAGAAGCTTCTGGAAC
AAGAAAGCATCTCACGAGACTTTCCCCTTAAGCCCATGACCATTTGGCAG
GCGCGCAAGCTGGAGCTGTGCTCGGATTCTTTTGGTCTTTGCATCCGTCA
AGCCTCCAGCAACCTCTCGCCGGTTTCGGCCAATGGGAGCAGCAGCAACA
GCAGCCACCGCTCCTCGGTCGGTTCGTCCGCCGCTGCCAAGGCGACGGGA
TCCCTCCCTCAACCGCACAGCCCCGTCGGTCCCTTCGCGCCCGGGGAGAG
GGCCACGGCGGCAGGGGGGCCCTTACGAGGGATTCCCGCCCTGATGGCTT
CCTCTACCTCTGTCCTCCCCACCCCGCCCAGCTCCCATTCCCTCGCCGCC
CGCCACGCTTCCTCCATTTCGACCGCCTCCTCCTCCACTGCCTCCTCCTC
GTCCCGGTTTCGAAAACCACGACCCGTGACCTCGGACTTGGCGCGCCGCT
CGCCGTGGACCCCGCTGCCACAGTCTCCGTCCCCGACCTACGAAGACATC
ACGTACACACCCAAAGGCCGCTATGTGCAGAGCTAGATGCGGAAGGGAAG
GATGGCCGCACCTTTGGCACATACGCCGCCTTTTCCGGCGGCTCAATATC
CATGTGCCAACGAAGGAGGTGGAGGCCAAGACGGCAATTCTGCGAACAAT
TTACCATACTTCGGACAGCACACGGATTTAAATAGTGCAGAATATTGCAA
AAGACAACGTGTGTACATGAGCCCAGGTCTGTGGGCGGAGCTTGACGCGG
ACCCACAGCGGGGAGTGGCCTTGATGGACTTGGCGGCGGCTCAACAAGCA
CAAGAAGCTGAGCAGTTCCGGCTCCGACAGCAACAACAACCACAGCGAGA
GCCACAAGGACACGACGGATCAAAAGGTGGTTATTTAGAAGCGCAGCGAG
GGCACATGCAGCATGCCTGGGTGGCGGAAGGGGCAGGGGAGACGGCCATG
GACACGGGCGACGAAGGGAGGGACAAGGAGGAGGACGTGGCCCGTTTTTT
TGCCGATTCTCCGCCAGCAGCCACCGCCACCCGCGCCGACTTTCCTTCGA
CACGTACAAATATCTCCACGACCGGCCAGGCCAGGGCGCAGGACGATTGG
CCCATGCCCACCCCGCCCTTACCCCCCAAGAGTGGACGGAGCGGGATGGA
GCCCTCTAGGGAAGAGCTCTCGGCGCCCCCCCCCGGGGGTCACATTAGGA
GCAGCAAAACCACGGACGACGTGGTCTCGACAATCTACCGTCCTTTGCTC
ATGACGGGCACCACACCCAACTCGACCAGTTCCATTTTCTGCCGCAACAC
CGCCTGTAACCCCCACGCGGACCAGATCATCTTGTGCATGGCGAGCGTCC
TCCAAGTACAAATGCTGCACGACAAGGAGGCCGCCAACACCAACCAGGCG
CTGCGGGACAAGTTTCGGTGTTTCGAGCCCCCCCTTCCTGTGGCCACAGG
GGAGGCAGGCAGCGGGGAGGGCGTGGTGGCCATGGAAGGTCAGGGGCCCA
CGGAGAGTCAAGGAGAAGAGGAGGTGACGGTGGAGGAGATCCACTGTTTC
ATCGAAGGTATCTTCAAGCGGGCGCGTTTCTCGCCCGAATGCAACATCAT
TGCCTTGGTTTACATCAATCGGGTCATATCCACGACTTCTTTACCCTTGC
ACGCCCGTAACTGGCGGGCGGTGGTGCTGGTCGCTCTTCTCCTCGCGCAG
AAAGTGTGGGACGACCGTTGCATCGCCCTCTCTTCTTTCTCCCCGCATTT
GCCCGATTTCCCCCTCGAACGGATCCGTTTGGTGGAGCGGAAATTTCTGG
AGCTGCTCCAGTACCGAGCCACGGTCACCCAGGCCCTCTACACGCGCTAC
TACTTCGAACTCCGGGCTTTGTTCGAGAAGCTTCTGGAACAAGAAAGCAT
CTCACGAGACTTTCCCCTTAAGCCCATGACCATTTGGCAGGCGCGCAAGC
TGGAGCTGTGCTCGGATTCTTTTGGTCTTTGCATCCGTCAAGCCTCCAGC
AACCTCTCGCCGGTTTCGGCCAATGGGAGCAGCAGCAACAGCAGCCACCG
CTCCTCGGTCGGTTCGTCCGCCGCTGCCAAGGCGACGGGATCCCTCCCTC
AACCGCACAGCCCCGTCGGTCCCTTCGCGCCCGGGGAGAGGGCCACGGCG
GCAGGGGGGCCCTTACGAGGGATTCCCGCCCTGATGGCTTCCTCTACCTC
TGTCCTCCCCACCCCGCCCAGCTCCCATTCCCTCGCCGCCCGCCACGCTT
CCTCCATTTCGACCGCCTCCTCCTCCACTGCCTCCTCCTCGTCCCGGTTT
CGAAAACCACGACCCGTGACCTCGGACTTGGCGCGCCGCTCGCCGTGGAC
CCCGCTGCCACAGTCTCCGTCCCCGACCTACGAAGACATCACGTACACAC
CCAAAGGCCGCTATGTGCAGAGCTAGATGCGGAAGGGAAGGATGGCCGCA
CCTTTGGCACATACGCCGCCTTTTCCGGCGGCTCAATATCCATGTGCCAA
CGAAGGAGGTGGAGGCCAAGACGGCAATTCTGCGAACAATTTACCATACT
TCGGACAGCACACGGATTTAAATAGTGCAG back to top
|