EWM25689.1, cds4979 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|585107543|gb|EWM25689.1| (n-terminal domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1297.72 bits (3357), Expect = 0.000e+0 Identity = 629/629 (100.00%), Postives = 629/629 (100.00%), Query Frame = 0
Query: 1 MRKGRMAAPLAHTPPFPAAQYPCANEGGGGQDGNSANNLPYFGQHTDLNSAEYCKRQRVYMSPGLWAELDADPQRGVALMDLAAAQQAQEAEQFRLRQQQQPQREPQGHDGSKGGYLEAQRGHMQHAWVAEGAGETAMDTGDEGRDKEEDVARFFADSPPAATATRADFPSTRTNISTTGQARAQDDWPMPTPPLPPKSGRSGMEPSREELSAPPPGGHIRSSKTTDDVVSTIYRPLLMTGTTPNSTSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLELCSDSFGLCIRQASSNLSPVSANGSSSNSSHRSSVGSSAAAKATGSLPQPHSPVGPFAPGERATAAGGPLRGIPALMASSTSVLPTPPSSHSLAARHASSISTASSSTASSSSRFRKPRPVTSDLARRSPWTPLPQSPSPTYEDITYTPKGRYVQS 629
MRKGRMAAPLAHTPPFPAAQYPCANEGGGGQDGNSANNLPYFGQHTDLNSAEYCKRQRVYMSPGLWAELDADPQRGVALMDLAAAQQAQEAEQFRLRQQQQPQREPQGHDGSKGGYLEAQRGHMQHAWVAEGAGETAMDTGDEGRDKEEDVARFFADSPPAATATRADFPSTRTNISTTGQARAQDDWPMPTPPLPPKSGRSGMEPSREELSAPPPGGHIRSSKTTDDVVSTIYRPLLMTGTTPNSTSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLELCSDSFGLCIRQASSNLSPVSANGSSSNSSHRSSVGSSAAAKATGSLPQPHSPVGPFAPGERATAAGGPLRGIPALMASSTSVLPTPPSSHSLAARHASSISTASSSTASSSSRFRKPRPVTSDLARRSPWTPLPQSPSPTYEDITYTPKGRYVQS
Sbjct: 1 MRKGRMAAPLAHTPPFPAAQYPCANEGGGGQDGNSANNLPYFGQHTDLNSAEYCKRQRVYMSPGLWAELDADPQRGVALMDLAAAQQAQEAEQFRLRQQQQPQREPQGHDGSKGGYLEAQRGHMQHAWVAEGAGETAMDTGDEGRDKEEDVARFFADSPPAATATRADFPSTRTNISTTGQARAQDDWPMPTPPLPPKSGRSGMEPSREELSAPPPGGHIRSSKTTDDVVSTIYRPLLMTGTTPNSTSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLELCSDSFGLCIRQASSNLSPVSANGSSSNSSHRSSVGSSAAAKATGSLPQPHSPVGPFAPGERATAAGGPLRGIPALMASSTSVLPTPPSSHSLAARHASSISTASSSTASSSSRFRKPRPVTSDLARRSPWTPLPQSPSPTYEDITYTPKGRYVQS 629
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|118386187|ref|XP_001026214.1| (amine-terminal domain cyclin [Tetrahymena thermophila SB210] >gi|89307981|gb|EAS05969.1| amine-terminal domain cyclin [Tetrahymena thermophila SB210]) HSP 1 Score: 154.451 bits (389), Expect = 3.549e-39 Identity = 86/228 (37.72%), Postives = 132/228 (57.89%), Query Frame = 0
Query: 246 STSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLE 473
+++++F R+T +P+ II +A++L QM D ++ D F + E A+ + P+ V+ I+ F++ +++ A+FSPEC II LVYINR+I+ T LPL+ NWR ++L +LL+AQKVWDD+ ++ + F+ P F E I +E+KFLELLQY TV ALY +YYFELRALF+ +FPL P+ + Q ++LE
Sbjct: 12 TSNTLFIRHTISSPNVKSIIQAVATILHSQMHEDFQSGKEVPKGSD-LHFFSEEKYIEEKPEEFDEARRALLRETPS---------VDNIYEFMKALYECAKFSPECCIICLVYINRLIAFTGLPLYPTNWRPLILCSLLVAQKVWDDKYLSNADFAFIYPFFVTEEINALEQKFLELLQYNVTVKSALYAKYYFELRALFKN-------ESEFPLTPLDVDQEKELE 222
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|954188024|gb|KRX00851.1| (Cyclin-like protein [Pseudocohnilembus persalinus]) HSP 1 Score: 147.517 bits (371), Expect = 1.179e-36 Identity = 85/233 (36.48%), Postives = 129/233 (55.36%), Query Frame = 0
Query: 241 GTTPNSTSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLE 473
++T S++ + +P+ II ++++L QML D+++ D + F + E A+ + P+ V+ I+ FI+ ++ A+FSPEC II LVYINR+I+ T +PL+ NWR ++L +LL+AQKVWDD+ ++ + F+ P F E I +E KFLELLQY+ TV ALY +YYFELRALF+ +FPL P+ A LE
Sbjct: 8 NVCSSTTGSMYVTSLITSPNVKSIIQAVSTILHSQMLEDQDSGKDIPKNSDLYF-FSEEKYIEEKPEEFDEARKALLRETPS---------VDNIYEFIKALYDCAQFSPECCIICLVYINRLIAFTQMPLYPTNWRPLILCSLLVAQKVWDDKFLSNADFAFIYPFFVTEEINRLEAKFLELLQYKVTVKSALYAKYYFELRALFKN-------QEEFPLVPLDQQSAALLE 223
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|145549069|ref|XP_001460214.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124428043|emb|CAK92817.1| unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 147.517 bits (371), Expect = 1.199e-36 Identity = 86/235 (36.60%), Postives = 131/235 (55.74%), Query Frame = 0
Query: 245 NSTSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEV------TVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLE 473
N+TSS++ ++T NP+ II ++++L QM D+E +P + E E P E + ++ +V+ I+ F++ ++ A+FSPEC II LVYINR+I+ T L L+ NWR ++L +LL+AQKVWDD+ ++ + F+ P F + I +E KFLELLQY TV LY +YYFELRALF+ ++FPL P+ + Q+ LE
Sbjct: 13 NTTSSMYIKSTISNPNVKSIIQAVSTILHSQMQEDQEQGKQ--------------IPKTSELYFFSEEKYIEEK--PEEFDEQRKLLLREPPSVDNIYEFMKALYDCAQFSPECCIICLVYINRLIAFTGLTLNPTNWRPLLLSSLLVAQKVWDDKYLSNADFAFIYPFFTTQEINKLEAKFLELLQYNVTVKGDLYAKYYFELRALFKG-------DQEFPLYPLDVTQSANLE 224
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|471223987|ref|XP_004030756.1| (n-terminal domain protein [Ichthyophthirius multifiliis] >gi|340502876|gb|EGR29520.1| n-terminal domain protein [Ichthyophthirius multifiliis]) HSP 1 Score: 145.976 bits (367), Expect = 1.598e-36 Identity = 71/144 (49.31%), Postives = 104/144 (72.22%), Query Frame = 0
Query: 331 TVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLEL 474
+V+ I+ F++ +++ ++FSPEC II LVYINR+I+ T +PL+ NWR ++L +LL+AQKVWDD+ ++ + F+ P F + I +E++FLELLQY TV ALY +YYFELRALF+ EQE FPL P+ + +A+KLEL
Sbjct: 46 SVDNIYEFMKALYECSKFSPECCIICLVYINRLIAFTGMPLYPTNWRPLILCSLLVAQKVWDDKYLSNADFAFIYPFFVTDEINQLEQRFLELLQYNVTVKSALYAKYYFELRALFKN--EQE-----FPLTPLDVDEAQKLEL 182
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|403353668|gb|EJY76376.1| (Cyclin, N-terminal domain-containing protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 142.124 bits (357), Expect = 1.138e-34 Identity = 83/214 (38.79%), Postives = 123/214 (57.48%), Query Frame = 0
Query: 260 HADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLE 473
+ D I+ +A++L Q+L D+ ++ D F E + EA + +A+ + P+ VE I F++ ++ A+FS EC II+LVYINR+I+ T +PL NWR +VL +LL+AQKVWDDR ++ + F+ P F E I +E+KFLEL+QY TV LY +YYFELR LF + +DFPL+ +T A+ LE
Sbjct: 22 NVDLILNAVATILHSQILEDQASSKIIAPGSDVFFFSEEKYILEKPEAFD-KARIALLRESPS---------VENIFDFMKALYDCAQFSSECCIISLVYINRIIAFTEMPLQPTNWRPLVLCSLLVAQKVWDDRYLSNADFAFIYPFFVTEEINKLEQKFLELIQYNVTVKSNLYAKYYFELRGLF------KDNEKDFPLQQITEGDAKLLE 219
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|675133126|ref|XP_008888450.1| (cyclin, N-terminal domain-containing protein [Hammondia hammondi] >gi|661332784|gb|KEP60952.1| cyclin, N-terminal domain-containing protein [Hammondia hammondi]) HSP 1 Score: 139.043 bits (349), Expect = 1.355e-33 Identity = 78/208 (37.50%), Postives = 124/208 (59.62%), Query Frame = 0
Query: 248 SSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDK--FRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQE 453
S+ +T P+ ++I +A++LQ Q+ D E +A+ +K +R F+ A ++ SGE AM + QGE TVEEI FI +++ A +SPECN++AL++INR+I+ + +PL A NWR +V +AL++AQKVWDD+ + +SF+ P F +E + +E FL LL + V + Y +YYFELR++ + QE
Sbjct: 22 SNWMLTSTVSQPNVQKMITAVAAILQDQISVDME----KRAVEEKPEWRVFDED---AYCDSNSGE--TAMRA-SVAKHQGEACPTVEEIRDFIGVLYEAAEYSPECNVLALLFINRLIAFSGMPLRASNWRPLVFIALIVAQKVWDDQVLTNASFAYLYPFFTVEEVNKMEAAFLSLLHFEVVVKPSTYAKYYFELRSMLQDPTSQE 219
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|1134880967|gb|OMJ78621.1| (hypothetical protein SteCoe_21546 [Stentor coeruleus]) HSP 1 Score: 137.887 bits (346), Expect = 3.071e-33 Identity = 77/216 (35.65%), Postives = 120/216 (55.56%), Query Frame = 0
Query: 258 NPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLE 473
NP+ I+ +++++ QML D Q+ D F F + E A+ + P+ V++I F+ +++ A+FSPEC II LVYINR+I+ T LPL NWR ++L + L+ QKVWDDR ++ + F+ P F E I +E+KFLEL+ Y TV LY +YYFELR L+ + + +FP++P+ +A++LE
Sbjct: 30 NPNVRSILQSVSTIIHSQMLEDSSLGREIQSTSDLFY-FSEEKYIREHPEMFDEQRRALLRKTPS---------VDDIFEFMRALYECAQFSPECCIICLVYINRLIAFTGLPLSPTNWRPIILCSFLIGQKVWDDRYLSNADFAYIYPFFSTEEINRLEKKFLELINYSVTVKATLYAKYYFELRGLYNE-------ANNFPIEPIHNEKAKELE 228
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|1134871473|gb|OMJ69773.1| (hypothetical protein SteCoe_32408 [Stentor coeruleus]) HSP 1 Score: 137.887 bits (346), Expect = 3.494e-33 Identity = 77/216 (35.65%), Postives = 120/216 (55.56%), Query Frame = 0
Query: 258 NPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLE 473
NP+ I+ +++++ QML D Q+ D F F + E A+ + P+ V++I F+ +++ A+FSPEC II LVYINR+I+ T LPL NWR ++L + L+ QKVWDDR ++ + F+ P F E I +E+KFLEL+ Y TV LY +YYFELR L+ + + +FP++P+ +A++LE
Sbjct: 30 NPNVRSILQSVSTIIHSQMLEDSSLGREIQSTSDLFY-FSEEKYIREHPEMFDEQRRALLRKTPS---------VDDIFEFMRALYECAQFSPECCIICLVYINRLIAFTGLPLSPTNWRPIILCSFLIGQKVWDDRYLSNADFAYIYPFFSTEEINKLEKKFLELINYSVTVKATLYAKYYFELRGLYNE-------ANNFPIEPIHNDKAKELE 228
BLAST of EWM25689.1 vs. NCBI_GenBank
Match: gi|514695859|ref|XP_004995500.1| (CCNYL1 protein [Salpingoeca rosetta] >gi|326437566|gb|EGD83136.1| CCNYL1 protein [Salpingoeca rosetta]) HSP 1 Score: 139.813 bits (351), Expect = 3.860e-33 Identity = 92/273 (33.70%), Postives = 139/273 (50.92%), Query Frame = 0
Query: 206 PSREELSAPPPGGHIRSSKTTDDVVSTIYRPL-LMTGTTPNSTSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAGSGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLELCSD 477
P E +PP RS+ V +PL L NSTS++F +T +P+ ++ + C+A L ++ D + + +KF P+ + + P+E++ I+ F+ +F A+ + EC II LVY+NR+I+ TSL LHA W+ VVL A+LLA KVWDD+ + F LP +E + +ER FLE+L + V +Y +YYFELRAL EK +DFPLKP+ QA++LE S+
Sbjct: 47 PLSSEAPSPPSRKLSRSTSRRFSVAEDDLQPLELANSRKFNSTSTLFVDSTVSSPNLEETLRCVALALSY-VVEDGHKQDNPRLFSEKFDEKRHPITDRVRRDYAS--------RIPSENR---------IYKFMFQLFNSAQLTAECAIITLVYVNRLIAYTSLTLHASTWKRVVLGAILLASKVWDDQAVWNVDFCSMLPSVAVEDMNDLERTFLEMLDFNIDVDSCVYAKYYFELRALAEKF------EKDFPLKPLNKDQAKRLEALSE 295 The following BLAST results are available for this feature:
BLAST of EWM25689.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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