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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100222g8.2413.mrna |
| Orig protein id | gnl|cribi|Naga_100222g8.2413 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:853066..854239 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4988 ID=rna4988|Name=rna4988|organism=Nannochloropsis gaditana|type=mRNA|length=2117bp
GGTTTTATCATCGGTTGACACGGCGCGGTGCGTGGGAGTGGAGGCGGGCG
CCCGGACGAGGCTTTAAGGAGCTTGGGAGCATCCTAGGAGGTACAAGGTG
AACGCCGTCCCGGTGCCGCGTCGGCTGGCTCGATATTTTGATGGCCTTCA
CGGGAGTTGCTCCACGGCAACCACCAGAATCCCCGCGGTCACGCCTCTCC
CCCTGTTTGTACAGTCTCCCTCTCCTCGTCGTCCTTTTCTTTCTGCCCGC
CGCCTCCCCCCAAACCTCCTGGGGGTCTACCCTGGACGCTACCAGCAATT
TTTTTAAATCCACGTGGGATAGCCTCGCGACCTATACAGGCTATCATGAT
TTCTGTCCGTTTGCCATGGATTTCTCGGAAACGGCACGGCGGGCCGTGCA
AGCCAAAATAAAGTGCCAAGACAGGGCCTTGACAGCCATCACCACGGGCC
TCAGTCATTGGGAGATGACATTGATGAAGGACCATCCCCGACCCTTGGTC
TTGGCGTTCACGGGGCCGACAGGGGTGGGCAAGACAGAGACAGCGCATGT
CATCGCCCGGGCCATTTTGCCCAAAACGGAGCTGGTGGGGAGTGGCAAAC
GACCTCGGGGATTGTTGGTCTTTCGGGGGGAGGACTTTGCGGATCGGCGC
GCAAATGTCACCAGCTACATTGACGTCATCAAAGCCAGCCTTTTCAAGCA
CTTAGAGAGGTGTCAGGGCCATGCAGTGGTCATCTTCGACGAAGTGCAGA
AAGTCGTCCCCGGCACGCTGGACGCCCTGGCCGAGGCCATCTCCGAGCAT
CCCACCCTGACCTACTACCCCGCCGAGGACCCCCGCGTCATCCACCGGAT
CGACACCAGCCACGTGGTCTTTTTCCTCATCAGTGACATTGGCTGGGAGG
ACATGCTGGCCCTGCTGGTGGCGCACGGGGGACACGCCGCTGCCCTTCCC
CCCCACCTGCTCTCCCAACGGGTCAAGGCGGCCTTGGACGCGCAATGGCA
ACGGCTTCGCTGCGGGAAAATGATCGACACGGTCGTCCCCTTTCTACCCT
TATCCCAGGCAGACATGCGGGAAGTATTGGACGTAAAGCTGGCGGAGATG
AGCGAGGAGCACGAGGGGAGGTTGTGGGCTCGGTTGGAGACGACTGAGGA
GGTTCGGGCGCACTTGGTCCAGAAGCCCTTTGTCAAATACGTTGGGTACG
GGTTGGAGGACGAGGGCGAGGGCGAGGACGAGGGCGAGGGCGGGGGAGAG
AGCGAAGGGAAGGATTGTCGGGCAGGAAAGGAGGTGTATTGGTACGCGGA
ATTTGGCGCGAGGAATTTGCAGACGGGGGGACCGTTACATGCCTTGGAGA
GTGCGATTGTGGAGAACATGAAACCATGGCGGCCGCTGGAGGTGCTGGAC
GTGCGCCTGAACAGTCAGACCGGGGAGACGGAACTAAGGTGGTGTCCGCA
AGAGACGTGGATGGGGGGGAAAGGGGGAGAGGGAGGGGCAGGGACGGCAT
CGCGGCTGTGGGAGGAAGCGGGGGCGACTGGATGTGACCTGCGATGGGCG
GGTGACTTGAAATTGAAGGTGGGCTAAAAAAGGCCTGGGAGGGGTTGTCC
TGACCCCGGGAAAGGAGCTATTAGAAAGGACCATCGGATTCTCCTCGGCG
CGCGGCGTCGTCCAGGAGGTTCGAGGGTGTCAGAATGATCGAATGGGCGC
CAGTGCGGTGGCAAGCAAGAGCCGTGGATCAGCAACAGACCCTGACCAGG
GATTGGGTGAGGGACAGGAGGCCGGAACGGGAGGAGGATGGCAGAGCGAG
GAGAGGATACTGGTGGAGGTCGAGGGAGGATTGCTTCGGTAGAGGGAAAG
GAAAAGGGTCGCCTGAAAGAAATTTGTAACGATAAGGTCATTTAAAAAAA
TGTAAGAACAGAAGGACGTGGTCCAGAGCGTCGCGCGTCAGTGAAAAGCG
AAATGAACACTTTCGACACGACAAATTTGAGGCCGTGACTGCCTCCCTTT
TATCGAGGCCACAAGGCACCTTTGCTTCCTTGAGCAAAACCCGGGGGTGC
CGCGTACGTCCCGGCCATTCCCCACCCCACACATACATCCTACATCCCAG
TCTAATGCCCGCCGTCA back to topprotein sequence of rna4988 >rna4988-protein ID=rna4988-protein|Name=rna4988|organism=Nannochloropsis gaditana|type=polypeptide|length=145bp
MQSSRSHKGERSSLLRTRRGTLTKPPSDMLGRIATTFSRQVPRRAPSLAF
TRPTTGRRFLGSGGGHGDHFHVSEMHQKAATVMTTVCWVWMLWRCYEDGA
VVLGLRHPWDGHGDHGHHGGGAHFKDVDFDGPSELEEAEEDDGGH back to topmRNA from alignment at CM002464.1:853066..854239- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4988 ID=rna4988|Name=rna4988|organism=Nannochloropsis gaditana|type=mRNA|length=1174bp|location=Sequence derived from alignment at CM002464.1:853066..854239- (Nannochloropsis gaditana)
AGAGTGTGATCAAAAAGAAAACCTTGACTTTAGGCCTCAGAGCATTGAAG
CCCGCGGGAAAGGTAGACGGGGACTGTGAAATGGAAGAGGACGCCTTGCT
TCCGCATGCGGGAAACGATGACGGTGGCAGTGTGATGGAAAAGGACCTCT
CGCTTTTCGGTTGTCTGCAGGCAATGTGCCTGCGGGGACTTGGTGCGAGT
CTGTCACTGTGGAAGCTGTGTCACGCAGACGGATAGGGTGGTCGTTGACA
CTGAAAAGTAGAAATGTGGCGGTTGGGAACCTCTTGATCATGACAATCGC
GTAGAAGGGATGCTCCGTTGTTTATCTTTGACATCTCTGTCTTCCCCTTC
ATGCAATCTTCACGGTCTCACAAAGGCGAGCGGTCTTCGTTGTTGAGAAC
ACGGCGTGGTACTCTTACAAAACCGCCTTCTGACATGCTTGGTCGCATAG
CTACCACGTTCTCGCGGCAAGTGCCGAGAAGGGCGCCGTCACTCGCGTTC
ACTCGTCCTACTACCGGTAAATCCTCTTTCCCCGTTATCTCGTCCGGCTA
CTCCCTTTCCCGATGCTTCTCACAAGCTGACTGATGTCTAGAAACGATTT
CGTCTACCTGACCAAGTTTGCTTGGTACTGTCTCACTCGGGCGTGCCGCC
CTCTTTCTCCCGACCGTCCATGGCTTTACATGTTTTCTCCCGTTGACCCT
AGACGCTCCAACCTTCTTGTCCACAGGCAGGCGGTTCTTAGGAAGCGGAG
GCGGCCATGGAGACCATTTCCATGTCTCAGAGATGCATCAAAAAGCGGCG
ACAGTCATGACGACTGTTTGCTGGGTGTGGATGTTGTGGCGATGTTATGA
AGATGGCGCCGTGGTACTGGGGTTGAGGCACCCGTGGGATGGGCATGGGG
ATCATGGACACCATGGGGGAGGCGCACACTTCAAGGATGTCGATTTCGAC
GGTCCCTCGGAGCTAGAGGAAGCCGAGGAGGATGACGGCGGGCATTAGAC
TGGGATGTAGGATGTATGTGTGGGGTGGGGAATGGCCGGGACGTACGCGG
CACCCCCGGGTTTTGCTCAAGGAAGCAAAGGTGCCTTGTGGCCTCGATAA
AAGGGAGGCAGTCACGGCCTCAAATTTGTCGTGTCGAAAGTGTTCATTTC
GCTTTTCACTGACGCGCGACGCTC back to topCoding sequence (CDS) from alignment at CM002464.1:853066..854239- >rna4988 ID=rna4988|Name=rna4988|organism=Nannochloropsis gaditana|type=CDS|length=876bp|location=Sequence derived from alignment at CM002464.1:853066..854239- (Nannochloropsis gaditana)
GCAGGCGGTTCTTAGGAAGCGGAGGCGGCCATGGAGACCATTTCCATGTC
TCAGAGATGCATCAAAAAGCGGCGACAGTCATGACGACTGTTTGCTGGGT
GTGGATGTTGTGGCGATGTTATGAAGATGGCGCCGTGGTACTGGGGTTGA
GGCACCCGTGGGATGGGCATGGGGATCATGGACACCATGGGGGAGGCGCA
CACTTCAAGGATGTCGATTTCGACGGTCCCTCGGAGCTAGAGGAAGCCGA
GGAGGATGACGGCGGGCATTAGATGCAATCTTCACGGTCTCACAAAGGCG
AGCGGTCTTCGTTGTTGAGAACACGGCGTGGTACTCTTACAAAACCGCCT
TCTGACATGCTTGGTCGCATAGCTACCACGTTCTCGCGGCAAGTGCCGAG
AAGGGCGCCGTCACTCGCGTTCACTCGTCCTACTACCGGCAGGCGGTTCT
TAGGAAGCGGAGGCGGCCATGGAGACCATTTCCATGTCTCAGAGATGCAT
CAAAAAGCGGCGACAGTCATGACGACTGTTTGCTGGGTGTGGATGTTGTG
GCGATGTTATGAAGATGGCGCCGTGGTACTGGGGTTGAGGCACCCGTGGG
ATGGGCATGGGGATCATGGACACCATGGGGGAGGCGCACACTTCAAGGAT
GTCGATTTCGACGGTCCCTCGGAGCTAGAGGAAGCCGAGGAGGATGACGG
CGGGCATTAGATGCAATCTTCACGGTCTCACAAAGGCGAGCGGTCTTCGT
TGTTGAGAACACGGCGTGGTACTCTTACAAAACCGCCTTCTGACATGCTT
GGTCGCATAGCTACCACGTTCTCGCGGCAAGTGCCGAGAAGGGCGCCGTC
ACTCGCGTTCACTCGTCCTACTACCG back to top
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