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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100333g3.1592.mrna |
| Orig protein id | gnl|cribi|Naga_100333g3.1592 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:823519..824778 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4978 ID=rna4978|Name=rna4978|organism=Nannochloropsis gaditana|type=mRNA|length=1709bp
AGGATTTTTTAGGACTTACATACTCCCACTCACCGATGACAGGAGGAGCA
AAGATTGCCTTTTAAATACTTGATAACGGTGTCACTTTAAGAAAACATTA
AGAGTTGATGATTTGTATCCTGAATGACCCTGGTCAATCGAGAAAGTGAT
CTCCTCACTGCGCACTCTACACAGCCAGTCACACAGCAGAAGCAGCCATG
GCCGACGAAGCTAGCAAAAAACCGGAGGGTGCTAGCCCGTTTGCCAACAC
CACTTTCTCTTTCACTGCTCCACAAGGGGGCGTGACTGGTCCTTTCCCCA
GCCTTAGTGGCTTCCAGCAAGCCCTTGCAGACGCCGCACAAGGCGCGGCG
GAAGAGGAGGGCGAGGAGGAGGTTGCGCCGGAAGTTCAGGTTCGGATTGA
ATATTTGAAGAAACTGCAGCAAGAGCGAGAGGAGTTTATGGACGCCTTCC
ACGAGGAACGCAAAGCCTTGGTCAAGAAGTACGCACTGTTGACAGCTCCA
CTGCTGAGCAAGCGGGAAGCCTTGCTAAAAGGGGCCATAGACGTGAAAGA
GGAGGATGGGCAGGTGGTCGAGAAGCCCGTGGAGGCGGCAGCAGGGGAAG
GGGAGGAGGGAGAAACGAGCCTGCCGAAGGGCATCCCCAATTTCTGGCTT
CGGACATTGATGAGCCACCGACTGATCGCGGGCATGGTTCAGGAGGAGGA
CGTGGGGGCCTTGAAGTACCTGAGGGATGTGGAGTGCGTGGACAAGGAGG
ACGGTGCGGGATTCTCCCTCCATTTCCATTTCGCTCAACCCAACCCCTAC
TTCACCAATCCGGTCCTTTCCAAAGCCTACGAGGTGCCCAACCTGATGGA
CGACGGGGAGGCGATCTTGCAGGCCTGCGCCGGGACCGCCATCCACTGGG
TCTCCCCCAAGCAGAATCTGTGCATGGAGGAGAAGAGGATGAAGCCCAAA
GGAAAGAGCCGGGGCGGGGTCGTGGTCAAGCAGATCAAGAAGGAAAGTTT
CTTCAACTGGTTCGAGGCGGTGGACATCCCTGAGGACCCGGAGGACGTGG
AGGAGGAGGAGTACGAAGAGCTGATGGGCAAGCTGGATTACGACTATGCC
GTCGCCTCGATCCTGCGGGAGGAGATTGTGCCGGAGGCGATCAAGTGGTA
CCTGGGGGAGGGGGAGGAGGACGAGAGCGAGTACGCGGACAGCGTGGGCG
AGAGCGAGGAGGACGATGAAGATGAGAGCGTCACGGAGAGTAGCGATGAC
GACGAGCCGTCCCCGCCACAGCGACGTCCGCGTCAGCCAGGACGGCCTCG
ACGAGGAGGGCGTTGAGGGTGTAGAAGTCAAGGAACGGAAGGCACAGATG
CATTGAAGGGGATAGGCAGCCTCACGGGGAAAAAAGAAGAAAACGCATAC
CTGAGCGAGGCTTTGACCCGCTCGTCGCTTCAGTCGCTGCTTTCATGACC
GGGCCTGGGATTGTGATAGGTGACGACGTTTGACAGCAACGACGGTCGAG
AATGCAGGAATGTGCAGTTTCTGGTGGCGGTAGTTTGGGATATTTGCGTG
CGGTTTACATATGCTTGAGGACAGTGGACACTCGGCGGCACTGAACGTAC
CACCTTGCCTCAAAGCTAGGGCCTTTGTGATGGAAGATATTGACGCATCA
CGATAGCATCTTTTTGCATTTCACTTTATTGCTTTAGCACGCAAGTGTTT
GAACTTCCC back to topprotein sequence of rna4978 >rna4978-protein ID=rna4978-protein|Name=rna4978|organism=Nannochloropsis gaditana|type=polypeptide|length=202bp
MTAIPTTQPWIGFHHAFVHFPRRFLDTFPRCLLPSPLIPPSPKTLEADHF
CFDRLDYPYGFLLSCLYDASCLSQTSSGRALSLGRPLRPSLPTLQDPPRI
LHHLHHAHAPILTRGILNVLPFQQHVVQPLQRRLHFLPSVLLCLSSWPLL
HQAHRVHQGTLLMKSAHQTSFDSCPIEGELTSDRAQKMQERTSTLPRLRD
FP back to topmRNA from alignment at CM002464.1:823519..824778- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4978 ID=rna4978|Name=rna4978|organism=Nannochloropsis gaditana|type=mRNA|length=1260bp|location=Sequence derived from alignment at CM002464.1:823519..824778- (Nannochloropsis gaditana)
TGTGCCAAGAAAAAAAATACGTTCAAACTTGAAGCACGCGGCCATAAAGA
TGGCATTGGAAGGTGTTGGTCAGCTTATTTACATGGCTTGCATTGCACGC
TTATCCCAAGCGCGTATTTACGTTAACATGGTCGTGCTCCTCCACTCGCG
CTGTCACTCTCTGTCTACCTCCCCCATCCCATCAAAGACTTGCTCGGGCA
CCTCCACGCCTGTTCCCCTTTTTCCATATTTCTCCTGCTGTTCCAACACG
ACTGCAGCAAGCAAGGTCTCGTTCAAACAGAATTTTCGGATTTCTGTCAC
ACCATGACGTGGACTGTGTGCCCTCTGCCCCCTCTGGCGCTCCTCCCCTC
GGATCGATCTTCTCTCTCGACCCCTCCCTTCCTCCATCCTCGTTTCCTCC
ACCACCCTCCGGTCATCCCTCATCTCCACCAATTTTCCATTGATTTTCAC
CCTCCGCGTTTCCATTGCTCTTCGACGCCGTCCGTGCAAGACACGGCTCA
ACTCCTTCATCAAAGCATCTTGCCCCTCAACTCTATCAGAGCACCCTCGA
CCTTCTCGGAAATCCTGCCCGATCCACTTCTGTGCGCCTGAGTCATGACT
GCCATCCCCACCACTCAGCCGTGGATCGGTTTCCACCATGCCTTCGTACA
CTTCCCACGCCGCTTCCTCGATACTTTCCCCCGCTGCCTCCTCCCGTCCC
CTCTCATCCCTCCCAGCCCCAAAACTCTCGAAGCTGATCATTTCTGTTTT
GATCGGCTCGACTATCCTTACGGCTTCCTCCTCTCCTGCCTCTACGACGC
CTCCTGCCTCTCTCAGACCAGCTCCGGACGCGCACTCTCCCTCGGCCGGC
CCCTCCGTCCCTCCCTCCCCACCCTCCAAGACCCTCCACGCATCCTTCAC
CATCTTCACCACGCCCATGCGCCCATCCTGACTCGTGGCATCCTCAACGT
CCTCCCTTTCCAACAACATGTCGTGCAACCGCTTCAGCGCCGCCTTCACT
TCCTCCCTTCCGTCCTCCTCTGTCTGTCCTCGTGGCCCCTCCTCCATCAG
GCGCACCGCGTCCACCAGGGCACATTGCTGATGAAAAGTGCGCACCAAAC
AAGTTTCGACAGCTGCCCGATCGAAGGAGAGCTGACGTCCGACCGAGCGC
AGAAGATGCAGGAGCGTACGTCGACTTTGCCCCGCCTCCGTGACTTCCCT
TGAAGGGGGAGTGATGGGCTGGGAAGGAGGGCCAAGGGCGTCGTGACCAG
TGGATGGAAG back to topCoding sequence (CDS) from alignment at CM002464.1:823519..824778- >rna4978 ID=rna4978|Name=rna4978|organism=Nannochloropsis gaditana|type=CDS|length=609bp|location=Sequence derived from alignment at CM002464.1:823519..824778- (Nannochloropsis gaditana)
ATGACTGCCATCCCCACCACTCAGCCGTGGATCGGTTTCCACCATGCCTT
CGTACACTTCCCACGCCGCTTCCTCGATACTTTCCCCCGCTGCCTCCTCC
CGTCCCCTCTCATCCCTCCCAGCCCCAAAACTCTCGAAGCTGATCATTTC
TGTTTTGATCGGCTCGACTATCCTTACGGCTTCCTCCTCTCCTGCCTCTA
CGACGCCTCCTGCCTCTCTCAGACCAGCTCCGGACGCGCACTCTCCCTCG
GCCGGCCCCTCCGTCCCTCCCTCCCCACCCTCCAAGACCCTCCACGCATC
CTTCACCATCTTCACCACGCCCATGCGCCCATCCTGACTCGTGGCATCCT
CAACGTCCTCCCTTTCCAACAACATGTCGTGCAACCGCTTCAGCGCCGCC
TTCACTTCCTCCCTTCCGTCCTCCTCTGTCTGTCCTCGTGGCCCCTCCTC
CATCAGGCGCACCGCGTCCACCAGGGCACATTGCTGATGAAAAGTGCGCA
CCAAACAAGTTTCGACAGCTGCCCGATCGAAGGAGAGCTGACGTCCGACC
GAGCGCAGAAGATGCAGGAGCGTACGTCGACTTTGCCCCGCCTCCGTGAC
TTCCCTTGA back to top
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