EWM25709.1, cds4966 (CDS) Nannochloropsis gaditana

Overview
NameEWM25709.1
Unique Namecds4966
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:823576..824184 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25709.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100333g3.1592.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:823576..824184 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25709.1 vs. NCBI_GenBank
Match: gi|585107567|gb|EWM25709.1| (hypothetical protein Naga_100333g3 [Nannochloropsis gaditana])

HSP 1 Score: 403.675 bits (1036), Expect = 2.321e-142
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 
Query:    1 MTAIPTTQPWIGFHHAFVHFPRRFLDTFPRCLLPSPLIPPSPKTLEADHFCFDRLDYPYGFLLSCLYDASCLSQTSSGRALSLGRPLRPSLPTLQDPPRILHHLHHAHAPILTRGILNVLPFQQHVVQPLQRRLHFLPSVLLCLSSWPLLHQAHRVHQGTLLMKSAHQTSFDSCPIEGELTSDRAQKMQERTSTLPRLRDFP 202
            MTAIPTTQPWIGFHHAFVHFPRRFLDTFPRCLLPSPLIPPSPKTLEADHFCFDRLDYPYGFLLSCLYDASCLSQTSSGRALSLGRPLRPSLPTLQDPPRILHHLHHAHAPILTRGILNVLPFQQHVVQPLQRRLHFLPSVLLCLSSWPLLHQAHRVHQGTLLMKSAHQTSFDSCPIEGELTSDRAQKMQERTSTLPRLRDFP
Sbjct:    1 MTAIPTTQPWIGFHHAFVHFPRRFLDTFPRCLLPSPLIPPSPKTLEADHFCFDRLDYPYGFLLSCLYDASCLSQTSSGRALSLGRPLRPSLPTLQDPPRILHHLHHAHAPILTRGILNVLPFQQHVVQPLQRRLHFLPSVLLCLSSWPLLHQAHRVHQGTLLMKSAHQTSFDSCPIEGELTSDRAQKMQERTSTLPRLRDFP 202
The following BLAST results are available for this feature:
BLAST of EWM25709.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107567|gb|EWM25709.1|2.321e-142100.00hypothetical protein Naga_100333g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4978rna4978Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications