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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100087g9.1117.mrna |
| Orig protein id | gnl|cribi|Naga_100087g9.1117 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:754989..756496 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4953 ID=rna4953|Name=rna4953|organism=Nannochloropsis gaditana|type=mRNA|length=3615bp
ATGTCCTCTGCCTCTTTTTCTCTCCAACGTCCCATTTCCTCCTTGCTTCC
CTTGGTCTGCCTCCTTCTACTCTCCCTCCTTCTCGTCACCACAAAGGCCT
TCACTTGCAGCCCCGCCCTTGCCCTCTCTGAAAGCGTAGGGCCAAACGGG
CTTTGTGAGTGCAACCCCGGGTGGTACGGCCCGACTTGCGAGATATGCAC
GACGGACCAGGCATGTGGCATTTTGTTGAGAGACTCGGATGGAATATGTC
GCAACGACACATTCACAGCCATCCGAGAGAGCTTTGGTTGGTGTGCCATT
GCGAACGAGGACGTGACGAATTTGATCCATGGGGACGGCTTTGTTCAGAT
TTATTACGCTGCCAACGGCACCTTCTTCTTCGACTTCGTCAAGCGCCGAG
GCGACGGCGACTATCTTTCTTTGTTCCGATGCCACAGCAAGAAGACAAAG
GTGACGGAGGACCCGAAGCTGGGCCAAGTCAAGTACAGCTCGCCTGACCT
GGTGTGCAACATGACTTGCGTGATTGGCAGCGATAGGACATGCACTCAAG
GCCTCTCGGGCATTGTCGACCAGGTGGGGGCCAAAGGCGGGAGTAAGATC
ACCTGTGACCCGGCGGCCAGGACGTGCGACGTGCAGGAGGCCACGCTCGA
TCTGTTCTTGGGCGGTGTGCAAACCACGGGGTGCTATATGAGTGAATGCG
CCCGGAGAGGGGAAACGGTTGTTGTCTCTACGGGTTCCTTCGCCAACATT
GCTCGACAACCGCCCGCCCAACAAGTGTCGTACATTCTGGGTTTGGCCAT
GCTGGTAGCGACGCTCGTGATCTTGGTCCTGGCTTCGAGCTATTCATGGA
AGTCGGGCGGGTTCTCCGGCAGCCATGCAGGGGCGGCGCGCCTGTTGGCA
GGAAAGATGACGGGGAACAAGGGAGGCTTTGTCGCGGGCATGGCTGAGAC
AGACCAAGGGAAACACGCGGAGGGAGGAGGGCTACCCATGGCGTCGCCGG
GAGCTCAGAGGTTGCGCGAGGAAGAAGCGGGCGTCTTGCCCGGGTCTTTG
GGAGGGGCCGGCATGGCCATGGCCGCCGCTGCGGGGGGTCTTGGGACGCA
GGGAAGTGGTGTAATCGGCGGCGCGGGGCTTGGGGGAAAGAAGAGCAAAG
CCTGCCCCGTGGTGTGGGACGGCGTGACCTACACGGTGGCGGGCAAGCAG
GTGTTGAAAGGCGTCTCGGGGTATGCCCTGCCGGGGGAGCTCTTCGCGTT
GATGGGGCCATCCGGGTCGGGGAAAACCACTATGATCGACATCTTGGCCA
TGAAAAACAAGCGGGGCCAGGTCGGGGGCCGCGTGTACTACGGTAACGGC
CTGAGAAAGGCGTACGGGGAGGACCCCGGCGCGGACGAGCGTGTCCGGGA
GAGTGTGGGCTTTGTGGACCAGGAGGACAATTTGATGGGCACGCTGACGG
TCTATGAGGCCGTCCTGTTCTCGGCCTTCTTGCGCCTGCCTGATCGCATC
TCGGTGGAAGGAAAGACGGAGCGGGTGTTGCAGGTCCTGCAAGACTTGCG
GATCGCCCACGTGGCGGACTCGATGATCGGAAGCCAGGGCCGCCGTGGGA
TCTCGGGGGGGGAGAAACGACGGGTGGTGGTGGCGATGGAGATGGTGAAG
GTGCCCGCGGTCTTGTTCCTGGACGAGCCGACCTCGGGTTTGGACAGCTT
TAATGCGGCCTTGCTCGTGGACTGCCTGAGGGGGCTGGCCCGGCGGAATG
CGACGAACGTGGTGATGACCATCCACCAGCCCCGCAGCAACGTCTTCGCC
GGCTTCGACCGGATCCTCGTCTTGAACCAGGGAGAAATGACCTGGTTTGG
GAAAGCGAAAGAGGTGGATGCCTACTACGCCTCGATTGGCCACAGCATTC
CCAGCCACTACAATCCGGCGGATTTCCTTATCGATGTCTTGTTCACTGCA
GAAGGGGGAGAAAGGGAGGCTGGAGAGAGGCGGAATCCGGTAGCGACGGG
GGAAAGCAAAGGCAAGTGGTGGCCTTTGCAGGTGTTTGGGATGAAGAAGA
GTCTGGCGAGCGGATTGGAAGGCGCAGAAAATACGCGAAAAGAGGTAGAA
TTGGCCCATGGTTGGGGCAAGGAGAACGGGGCGGGTGTCGGGAAGGCGGG
CGGGGCGCCTGCCTCAGAGACGGCGGGGTCGCGGCCATTGGCCTCCCGTC
TGGCCCCTGGACCGTCGCAATCGGTGCGGGTAGACATGGGGGAGGAAGGA
ATGGAGGAGGAAGGAATGGAGGGGGGGGGAATGTTGCAGGATTCCGCTTT
CAAGCACAACACACGGGAGGAGGAAAGAAGGGAAAGGGAGGACGTGGGGG
TCTCCCCACCGACGTCCCTGTCGGGTCCATTCTTGCGGCATCACACCAAC
AGCAGCAGCAGGAACAGCACGAGCTTGAGCGGGGCAGAGGAGAGGCCGGA
TGCCGCTGCTGCCCACAAGCTCGAGCATGCGTCGGAAAAACCGAGTATCA
ACCCCTTCGCGGAGGCTTTCCGCCGCTCGGACGCCTACCAGGCCTTGGTG
GTCGATATGGCCTCGCTGTTGGGACCTCGGGGGAAGGACGGGGAGACGGG
TCTGGAGGGCGAGGGCGAAGGGAGTAACTCCAGCGGGAGCGAGGGGACCT
TGGTGACCCTTTCTCCCGTCGAACACTTGGAGGAGGACGGGAGCCAGGGG
GTGAAAGGCGTGGATCCTGCCGCCAGGGCGTCAGGCCTCGGAGACCCGTC
TCGGGTCTCGTGGAGGGCACGCGCATGGAAGGGTCTGCGTCGATGGTGCT
GGGAGATCGGTGTCCTGTCCCATCGATCCGTGTTGGATTTGGCGCGAAAT
CCGGTTCTTTTCTGGAGCCATGCGGGGGCTACGGCCTATTTCGCGGTCAT
CTTGGGGATCGTGTACTTTGACCTCTCCATGTCTTCCCTCCAGGCCATCC
AGAACCGTCTGGGCGCCTTTTTGCTGTCGTGCGTTTTCCTCTGTTTCACG
AGCGTGAGCGCGCTTCCCCTGTTTTGGCTGGAAAGGAACCTGTATCTACA
CGAGCAGTCCAACCGCTTCTACATGGCCAGCGCCTACTTTGTCTGCAAGG
TCTTTTTCGACCTGATCCCTCTACGCGTCGTTCCCACGGTCCTTTTCGGG
TCCATAACGTACGGCATGATCGGTCTCCGGCCCGGGTTCCAGCATTTTAT
CATCTACCAAGCCTTTTTGGTCTTGCTGGTTTGCACGTCGGCCCTGATCA
ACCTGATCATCGGCATGCTCACGCGGCACATCATGAGCGGGATCCTCATC
GCCACCATCGTCATGATCCATTTCTTGATGCTCACCAACCTCTTCGTCAA
CTTCGATTCCATGAGCGTGAGTTGGTTGAAGTTCTTGCGCCGTGTCTCCT
TTTTCAATTACGCCTATGAAGGCTTGAGCGAAAACGAGCTGGTAGGGCGA
CGTCTCGAGAACTTTGCCATCAGCACCGGGTCCGGCGTCCTCCATGAGCT
TGGTTTTTCCACCACCGCCATGTATTTTGATCTGATGTCGCTGATGATCT
ACTTGTTGGTGACCCTTGCCCTGGCGTTCATTGTGCTCAAGGTATGCGTG
CGTGAGCAGCGCTAG back to topprotein sequence of rna4953 >rna4953-protein ID=rna4953-protein|Name=rna4953|organism=Nannochloropsis gaditana|type=polypeptide|length=176bp
MPPITLNAGYFALLLALLLPTDAFVSSPVLHGVRKSADCRVWMSSAAVPP
ATEASPAAAAPTRPRREINILQVIESNGGYMAKVEVKNFKDVTEHTVITS
KELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVF
PINYFSVSQLAIFLDDTVEGVAAELR back to topmRNA from alignment at CM002464.1:754989..756496+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4953 ID=rna4953|Name=rna4953|organism=Nannochloropsis gaditana|type=mRNA|length=1508bp|location=Sequence derived from alignment at CM002464.1:754989..756496+ (Nannochloropsis gaditana)
AGCCAGGGACGGCAAAACAACCACAGAAATTCAACTATCTCCCCACTCTT
GTGCGTAAATCTTATGTGGTGCTGAGTATCGCATAAACCAATGTCCAATA
CGCATCGTGAGGGTTACATTCAAATGTGTTGAACAGGCACGCCACCGGAC
ACCAGCCTTTGAGTAATGAGACGTCACTCCTCTCCGTTGACTGAGAACGT
TCAAGGGATCCATGGCTAGACACAGCGCGAGCGCAAGAATGCGTGACAGA
TGCAAGCACTTGACTCCATAGACCTCCGTGCAACTCGCTGCCTTGCATTT
CTGCCAGCGGGTCTGCCCAGCGGAACGGGCATCGAACCGTGCCAGTGCAC
GACAGCGACGAACCACCAGCGAGTTCTCCGGCAGGGGGAAACGAGAACCG
AAAATATCAACACCGCAAGAGTCCTCGTGGAGGGCATCGAATGACCATGC
AACCCTTGATTTTCGCGTGCGTAGTTTAGCACGTGCGTCGCTCCTCATGA
TTTACtgacatttttttcctcttcttcccggcactgcgaaggaagaagga
tatCAACAATTACTTCAACTTCACTTGAAAAGGCATGCCCCCCATCACCC
TCAACGCCGGTTATTTCGCGCTCCTGTTGGCCTTGCTTCTACCAACCGAT
GCATTTGTGtcctcccctgtccttcACGGCGTCAGGAAAAGCGCTGACTG
TCGTGTATGGATGTCAAGCGCAGCAGTCCCACCGGCTACAGAAGCCTCCC
CTGCAGCAGCCGCACCAACGCGGCCGCGACGCGAGATCAACATCCTGCAA
GTCATCGAGTCTAATGGAGGCTACATGGCGAAGGTCGAAGTGAAGAACTT
CAAAGATGTGACCGAGCACACTGTCATCACAAGTAAGGAATTGTACCAGG
AAACGTGCGCGCTTGCGGGCAAGACTCCCGACGAGCTTCCGATTGAAGAC
TACTACCGCGGCGTATTCAAATTCATCATCGGTAAAGGCCTGCCGCTGAC
AAGGACTGAGGGTATGATCGACGCTGGTGTCTTCCCAATTAACTATTTCA
GTGTGTCGCAGCTGGCCATCTTCTTGGACGATAccgtggagggcgtggca
gCCGAACTTCGATAGATTAATGAGCAGCGTGTACTACCATGAGATGAAGA
AATTGTACGACGAATAGATGTGTGGGGGTCATAATGAGACGGTGGTGTCG
TCCCGAAGTTTGTCGGTGGATTCAAAGGGGCACTAGCGGAAAGCGGACCT
GAGGGCTATCGGGAGGCGTGCGATAAGACAGGAGGATAACCAGCCACGAG
AAAAGAAAACGAGAGAAACGTGGAAAAGAATTACAAAGGGATGCTTTCAG
GGTGTGCCCCGTGATTATCACCTGTCTCCTACCCGTACAAGGTGCTTGTA
GCCAGGGGGGATCGCCATGTTAGGTTGGCTCGCCTCTAGAgacgccagct
cctcccgaAGCGGTCGAAGCTTTTGAGCTGTCGGGGTCGCACCTCTATTC
TCCCATCG back to topCoding sequence (CDS) from alignment at CM002464.1:754989..756496+ >rna4953 ID=rna4953|Name=rna4953|organism=Nannochloropsis gaditana|type=CDS|length=531bp|location=Sequence derived from alignment at CM002464.1:754989..756496+ (Nannochloropsis gaditana)
ATGCCCCCCATCACCCTCAACGCCGGTTATTTCGCGCTCCTGTTGGCCTT
GCTTCTACCAACCGATGCATTTGTGtcctcccctgtccttcACGGCGTCA
GGAAAAGCGCTGACTGTCGTGTATGGATGTCAAGCGCAGCAGTCCCACCG
GCTACAGAAGCCTCCCCTGCAGCAGCCGCACCAACGCGGCCGCGACGCGA
GATCAACATCCTGCAAGTCATCGAGTCTAATGGAGGCTACATGGCGAAGG
TCGAAGTGAAGAACTTCAAAGATGTGACCGAGCACACTGTCATCACAAGT
AAGGAATTGTACCAGGAAACGTGCGCGCTTGCGGGCAAGACTCCCGACGA
GCTTCCGATTGAAGACTACTACCGCGGCGTATTCAAATTCATCATCGGTA
AAGGCCTGCCGCTGACAAGGACTGAGGGTATGATCGACGCTGGTGTCTTC
CCAATTAACTATTTCAGTGTGTCGCAGCTGGCCATCTTCTTGGACGATAc
cgtggagggcgtggcagCCGAACTTCGATAG back to top
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