EWM25737.1, cds4941 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25737.1 vs. NCBI_GenBank
Match: gi|585107599|gb|EWM25737.1| (hypothetical protein Naga_100087g9 [Nannochloropsis gaditana]) HSP 1 Score: 361.303 bits (926), Expect = 1.914e-126 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 Query: 1 MPPITLNAGYFALLLALLLPTDAFVSSPVLHGVRKSADCRVWMSSAAVPPATEASPAAAAPTRPRREINILQVIESNGGYMAKVEVKNFKDVTEHTVITSKELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDDTVEGVAAELR 176 MPPITLNAGYFALLLALLLPTDAFVSSPVLHGVRKSADCRVWMSSAAVPPATEASPAAAAPTRPRREINILQVIESNGGYMAKVEVKNFKDVTEHTVITSKELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDDTVEGVAAELR Sbjct: 1 MPPITLNAGYFALLLALLLPTDAFVSSPVLHGVRKSADCRVWMSSAAVPPATEASPAAAAPTRPRREINILQVIESNGGYMAKVEVKNFKDVTEHTVITSKELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDDTVEGVAAELR 176
BLAST of EWM25737.1 vs. NCBI_GenBank
Match: gi|298711500|emb|CBJ26588.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 91.6633 bits (226), Expect = 1.338e-20 Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = 0 Query: 63 RPRREINILQVIESNGGYMAKVEVKNFKDVTEHTVITSKELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDDTVEGVAA 173 + +R I + V E+ GY++ V+VKNFK T H ++ SKE + LAGK ++ + D V K+++ KG+ L TEGMI+A VFP+NYF++ QL+ F DD E + A Sbjct: 16 KKKRSITVQFVQETPAGYISVVDVKNFKATTNHRIVMSKEQLAQYSELAGK---KVEVGDLMGYVMKYMLDKGIKLDNTEGMIEASVFPVNYFTLKQLSYFHDDVEEKIVA 123
BLAST of EWM25737.1 vs. NCBI_GenBank
Match: gi|545709203|ref|XP_005706912.1| (hypothetical protein Gasu_22990 [Galdieria sulphuraria] >gi|452823381|gb|EME30392.1| hypothetical protein Gasu_22990 [Galdieria sulphuraria]) HSP 1 Score: 72.4034 bits (176), Expect = 1.202e-12 Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 0 Query: 72 QVIESNGGYMAKVEVKNFKDVTEHTVITSKELYQETCA-LAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDDTVEGVAAEL 175 + ++NGG+M +VEV + + ++ HTV+ K L++E A KTP+ + I VF ++I + + L T+G+ D+ FPINYFSV QL F D E + L Sbjct: 85 KTFKTNGGWMFEVEVNDSRQLSRHTVLLGKGLFEELVAEHTDKTPETVIIT-----VFNYLIERKVVLKNTQGVFDSSQFPINYFSVRQLFYFYPDCKEYLKQSL 184
BLAST of EWM25737.1 vs. NCBI_GenBank
Match: gi|873219174|emb|CEM38234.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 60.8474 bits (146), Expect = 9.371e-8 Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 0 Query: 68 INILQVIESNGGYMAKVEVK-NFKDVTEHTVITSKELYQETCALAGKTPDELPIEDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQLAIFLDD 166 I + V E NGG+M+ V + T+HTV LY + A + D + Y +FKF++ + + + TEGMID+ VFP+NYFS +Q+ +D Sbjct: 465 IKVEYVDEWNGGWMSDVVIDYGGGKTTKHTVTVGFFLYNDVVTKANREVDPETLVKY---IFKFMLDRKMSMDNTEGMIDSSVFPVNYFSAAQVEYVHED 561
BLAST of EWM25737.1 vs. NCBI_GenBank
Match: gi|1189382048|gb|OSX69631.1| (hypothetical protein BU14_1330s0001, partial [Porphyra umbilicalis]) HSP 1 Score: 56.9954 bits (136), Expect = 5.443e-7 Identity = 33/100 (33.00%), Postives = 54/100 (54.00%), Query Frame = 0 Query: 65 RREINILQVIESNGGYMAKVEVKNF--KDVTEHTVITSKELYQETCALAGKTPDELPI--EDYYRGVFKFIIGKGLPLTRTEGMIDAGVFPINYFSVSQL 160 +R +I V E+ GG++ ++ N K T HT+I SKE A+ T D P+ E + + +++ G T TEGMI++ +FP+NYF++ Q Sbjct: 70 QRFSDIKSVNETGGGWIVQLVATNGAKKPPTRHTIIISKE------AMTRMTADGTPVAPEQLAKYIMSYLMTSGFSTTNTEGMIESDIFPVNYFAIRQF 163 The following BLAST results are available for this feature:
BLAST of EWM25737.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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