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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100096g1.972.mrna |
| Orig protein id | gnl|cribi|Naga_100096g1.972 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1236070..1239380 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna495 ID=rna495|Name=rna495|organism=Nannochloropsis gaditana|type=mRNA|length=1356bp
AACCTTGTCCTCACCTCCCCCTCCACCACACACCCTCCGCTGCAGCCGGA
ATACTCGTTCTTCTACTTGCCTCCCCCAGCCCTCCTGTGCTGTGCCGCCG
CCGCCCTAATTGTGGGTTCCCGTCGGTCTCTTTGCACGTCAACTTACGCG
TAGGCATTCGCTTGTCACACTGGTGTTGTTGACGGCGCATCTTGCGGCAG
CAGTGGAGGGCGGGTCTGACCAGTCGTGAGTGTGCAGTCTCAGGAGCGGA
GTACAGACGTTGCGCCCACCAGGCCTCAGAAAACGACGACATTCGGGGCC
TGCTTGGTCATCACCACGAACGTGAAGGGACTGTCATGACAGACAGCAAA
AAGGATGCAACTTTGGCAACGCTGGCCATGGCCCCTTCTTCCACCGCCCC
GGCGGTCAGCACAGATAGCAGCACCACAAAAAGCAGCAGCAGCGCCGACA
ACGGCCGCGGCGGCAGTACATTGGCAGTAGCTCTCCGGGAGGTAGTGGAG
GATCTATTTTCTCCCTCCAAACTTGCGGTGCACCCGGTTTTGTCGGGCAC
TTTAAACACGCAGGGTTCCGTACCTCTGCCCGTCTTGGCTCAGTTGGCTG
AGATCCAAGCAGCCTGGAGCACGGCCAAAAAGACGAGCGGAGGGAAGAAG
GGGGAGGGCGGGAAAGAGGAAGGGCGGGAGTTGAGTGCAGAGGGCGGGCA
GGATGTGGTGGGAGTGTTGGTGGAGGCTGTGCAAATGTCGCGTTTGGTGC
AGCTCTCAGACGACGGCGGAGGCGCCAGGCCCCGGGTGGCGCGAAGCACC
ATCATTGCGCGAGAACTCCCTCCCGCCGTGACAGAAGCGGACGTCCGCGC
GCTCTTTCAAAAGTGGGCGGAGGCGGTGCTGGAAGTCCGGTGTGAGCATG
GGTTGTGGTACATCAAGTTGGCGGGGGAGGACGATGCCAAGGCGGCTTTT
CAGGCGCTGAACGGGACCCCGGTGGAAGGGCAGCCCCTGCGGCTTAGAAT
ACGTCCAGAGGTGGGCCAAGCCGTGTACGGTGGCTTCACTCCCCAGTCGA
ACACGGGGCCCGGGGCACACATGGGGGGGGGCGCCGGGAGGAGGGGGGGG
GGGGGAGGGAGGGGCCGGGAAAGGGCGTCTGGGAGGAGCACCTTCGTCGC
CAAGAGCGCCGGGAGGGATGATGATGGGCCCAGGGCGTCCGTTAGGACCA
GCGGGAATGCTGCATGTCGGCACCTATCCTGGGGGTGGCGGGCTTCTGCC
ACCGCAGCAACAGCATGCGCACCCCCCGCACCCCCACCACCTGTCCCTTC
CGCCTCCGCACAACGCCTACATGATGACCGGGGGAGGATTGGGTGCACCT
TTCATC back to topprotein sequence of rna495 >rna495-protein ID=rna495-protein|Name=rna495|organism=Nannochloropsis gaditana|type=polypeptide|length=757bp
MDGHVLGPMPSGALVGGGGGGGGRGRGGGRGGGMFLGRNGPFNLPLQQGG
GPMPLLQHQQGVGGAQSMPMRYHQQPPPPPGYSRPPRGVPHFPGSPHGPF
PGGPMVMAGGGLLPAMGRGGKGGDRSGTGPLGGPGAPRATSQPTSPTGGG
GGRGFEGGQLPSQSAPAQARRKQPQSQQPHFQHAQAPGGQQYHGGRMQQQ
QLPQLLSHQHQMHAQESMFGGGEMGPLPGTGLGKKKKGGGHQSHPQQGAQ
RGAGGTPGQSPHPAHGTADPAHLGGGRGGSMPAAPSSSTAAPLTGPEGKK
SVVINGRRGAANGEGGGSGAGAGMGGNGTGPTGGEGSTAAPVSSKKGKNK
KKGQQQQQQGAAPGVVTPAPVEISLTQDNFPPLSNLPAPGALGEAGGNEK
ARGEGLGKEDKLPHAAPRPVASHMPTVGGDRAVSHANPSTLPTRPSPMVE
KNDGSAGLPRAKGGSDVAPMVPANALESLQDKEGGLGKKAGESDTKPGDP
ACAAKDASLPPPTLTGSLVEKPPTSTSTSTTSSSSSSPTSSTATSTSTNT
STPALSTSSAPPSVPSSATTPTAPPPAPKGPWAAAVLRGAMHIDPSVPVR
LPLRTAAPASPSAAASGGSASTAASSRASNNDSATGAGSNVSVGGEGGPP
SSMSTAIGEENRSAASVGRKKMEGSGPERLGSNKPTSVEALAESSGKNAV
PPIPGGTSPAATASSSSSPSSAPVAKGPWGRKSFVEVVRLTGGGQASGGG
DGEEEKK back to topmRNA from alignment at CM002455.1:1236070..1239380+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna495 ID=rna495|Name=rna495|organism=Nannochloropsis gaditana|type=mRNA|length=3311bp|location=Sequence derived from alignment at CM002455.1:1236070..1239380+ (Nannochloropsis gaditana)
ATCATGGACGGCCACGTACTGGGGCCCATGCCCTCTGGGGCGTTGgtggg
tggcggagggggcgggggagggcgagggagagggggagggcgagggggag
ggatgttCCTTGGGCGCAACGGGCCGTTTAATTTGCCGTTAcagcaaggg
ggaggacccATGCCCCTTCTTCAGCACCAGCAAGGTGTTGGCGGGGCACA
AAGCATGCCTATGCGGTACCATCAGCagccaccgccgcctccaggctatt
cacgccccccccgcggcGTTCCCCATTTTCCTGGATCGCCCCACGGCCCC
TTCCCCGGCGGGCCCATGGTCAtggcgggaggggggttgCTCCCCGCgat
gggacgggggggcaagggaggggatcggTCCGGGACCGGCCCCCTCGGAG
GTCCTGGTGCTCCGCGCGCCACGTCGCAGCCCACGTCCccaacggggggg
ggaggagggcgagggttCGAGGGGGGGCAACTACCCTCGCAATCGGCACC
GGCGCAGGCGAGAAGAAAACAGCCACAGTCGCAGCAGCCGCACTTTCAGC
ACGCACAGGCTCCTGGTGGGCAACAGTACCATGGCGGACGCatgcaacaa
cagcagctgCCACAGCTCCTGTCCCATCAGCATCAGATGCATGCCCAAGA
GAGCAtgtttggaggaggggagatggggcCTCTGCCAGGCACGGGactgg
ggaagaagaagaaagggggaggccaTCAATCTCATCCGCAGCAGGGGGCA
CAGCGGGGGGCCGGGGGTACGCCAGGCCAATCGCCGCACCCTGCACACGG
CACGGCCGATCCGGCccaccttggcggcggcaggggcgggagCATGCCCG
CAGcgccctcgtcgtccacggccgcccccctcaccgggccggaggggaag
aagagcgtggTAATTAACGGTCGACGGGGGGCCGCgaacggggagggagg
gggcagtggggcgggggctgggatgggagggaatgggACGGGCccgacgg
ggggggagggaagcacggcGGCGCCCGTCTCTtccaagaaagggaaaaac
aaaaagaaggggcagcaacagcagcagcaaggagcGGCTCCCGGGGTCGT
GACTCCCGCGCCTGTGGAAATCAGCCTCACCCAAGACAATTTCCCCCCAC
TTTCCAATCTGCCCGCCCCTGGTGCGTtgggggaggccggaggaaacgag
aaagcaaggggggaggggcttggCAAAGAGGATAAGCTTCCGCACGCTGC
CCCTCGACCCGTTGCCTCGCACATGCCGACGGTGGGTGGGGACAGGGCTG
TCTCTCACGCCAATCCAAGCACGCTCCCTACACGTCCCTCTCCCATGGTC
GAGAAGAACGACGGGAGTGCCGGTCTGCCTCGTGCCAAGGGAGGCTCCGA
TGTCGCGCCGATGGTCCCTGCGAATGCGCTGGAATCCCtccaggacaagg
aaggaggcttaGGAAAAAAGGCAGGAGAATCAGACACGAAACCAGGGGAC
CCGGCGTGTGCAGCCAAGGACGCTTCGCTGCCGCCTCCGACGTTGACCGG
CTCTCTGGTTGAGAAGCCCCCAACTTCTACCTCTAcctccaccacatcct
cctcctcctcctccccgacatCCTCCACCGCtaccagcaccagcaccaaC
ACCTCGACCCCTGCcctgtccacctcctccgcccctccctcggtgccttc
ctctgccaccacacccaccgcccctccaccggcaccgAAAGGACCGTGGG
CCGCAGCCGTTCTACGCGGGGCCATGCACATCGACCCGTCGGTTCCTGTG
CGCCTGCCCTTGCGAACTGCGGCGCCTGCGTCCCCCTCGGCAGCGGCTAG
TGGGGGCAGTGCTTCCACGGCCGCCAGCAGCCGCGCCAGCAACAACGACA
GTGCGACAGGCGCCGGGTCGAACGtctcggtgggaggggagggagggcca
ccTTCGTCAATGTCTACGGCCATCGGGGAGGAAAATCGCAGTGCGGCATC
GGTGGGacggaagaaaatggaagggagtGGGCCTGAAAGGGtaagtggag
gcggagaagcaagggtggggagaaggggcgggCGCAAGAGAGGCTGGCGT
AATGATGTCTTTGTTTTAATTTGTTATTCAATGCCTTTTCCACGGCGATT
GGTGCATTTATTCGTATTTGTACTGTCTGAAGCCAGCTTTTGCCCTCTTC
CGTCACTGCCTTGCTCGTTTCTCGTGTGAAGTCTTGGACGCCATAATTCA
TGCCCTCGTTCCTCTCCAATATTTCCCTGTCCTGGCGTGCTTCATTCCTT
GGTTCTTCGTACCACAGCTCGGCAGCAACAAACCTACTTCCGTTGAGGCC
TTGGCCGAAAGCAGTGGGAAAAATGCAGTGCCTCCGATCCCAGGGGGGAC
ATCCCCGGccgccaccgcgtcctcgtcctcgtccccttctTCTGCCCCGG
TCGCCAAGGGTCcatggggaagaaagagcTTTGTGGAGGTCGTTAGGCTG
acgggaggcgggcaagccagtggaggaggagacggcgaagaagagaaaaa
gtgAATCCGGAACGCAAGGTTGGAAGTGGAATGGGACATTCACAGCGGCA
GCAACGTCTGTACGACAAAAGACTTGGCGAGCCCAGTATGATGCTGATGC
GACAACAGTAAGGAAACCGGGACGTCTGGCCGGTGTGGATGGGAAAGAGT
TATTTTAAAGCCGTGGGTACATGGCAGTTTCCATGCGGGCGTGGCCGTTA
TTCGGCCGTTGAGGTGGAATGGGGACTCAGTTTGACTCCGGCACCGCCCC
CGtaccatctccttccctcggcgCTTTGCGCACCGATTCCAGTACCGAGC
CTGCAGGGCGATCTCTTTCATGCATGCATTGGTGCTTAGGTGGATACGGC
GTTCCAGGAGCCTTGACACCCGATTTTGAGGGCTCTATTTCGCTTCGTCA
TTTAATGCTGGGAGGGACCGTTGAAAACGGTCAACAAATAGGAAGAGGAA
AccgggcaggaaagggattAGGCAGAAATGCATCGGTGTTTCTGGTCTGT
ATTTTTCACGAGAGAGATGTTGGAAGGGTCCGAAACCAAAGGGTTGGAGC
CCAAACATCAAGTTATGACGCCGTTCACACCCATTCAAGCGATAGATTTT
TGACGTTGCACGCTGCCATCCAGAGAAGCATAGGCTACACacgcggaggc
ggacgaggaggatgaaaaaagGTGTACAAGAGACGGGTGTTTCTGGCAAC
GGGTTGGAAGTTTAGCACAAGAGAAACAAAAATTTCTTCCTAGAAATGAA
TCCCTGTTGCA back to topCoding sequence (CDS) from alignment at CM002455.1:1236070..1239380+ >rna495 ID=rna495|Name=rna495|organism=Nannochloropsis gaditana|type=CDS|length=4548bp|location=Sequence derived from alignment at CM002455.1:1236070..1239380+ (Nannochloropsis gaditana)
ATGGACGGCCACGTACTGGGGCCCATGCCCTCTGGGGCGTTGgtgggtgg
cggagggggcgggggagggcgagggagagggggagggcgagggggaggga
tgttCCTTGGGCGCAACGGGCCGTTTAATTTGCCGTTAcagcaaggggga
ggacccATGCCCCTTCTTCAGCACCAGCAAGGTGTTGGCGGGGCACAAAG
CATGCCTATGCGGTACCATCAGCagccaccgccgcctccaggctattcac
gccccccccgcggcGTTCCCCATTTTCCTGGATCGCCCCACGGCCCCTTC
CCCGGCGGGCCCATGGTCAtggcgggaggggggttgCTCCCCGCgatggg
acgggggggcaagggaggggatcggTCCGGGACCGGCCCCCTCGGAGGTC
CTGGTGCTCCGCGCGCCACGTCGCAGCCCACGTCCccaacggggggggga
ggagggcgagggttCGAGGGGGGGCAACTACCCTCGCAATCGGCACCGGC
GCAGGCGAGAAGAAAACAGCCACAGTCGCAGCAGCCGCACTTTCAGCACG
CACAGGCTCCTGGTGGGCAACAGTACCATGGCGGACGCatgcaacaacag
cagctgCCACAGCTCCTGTCCCATCAGCATCAGATGCATGCCCAAGAGAG
CAtgtttggaggaggggagatggggcCTCTGCCAGGCACGGGactgggga
agaagaagaaagggggaggccaTCAATCTCATCCGCAGCAGGGGGCACAG
CGGGGGGCCGGGGGTACGCCAGGCCAATCGCCGCACCCTGCACACGGCAC
GGCCGATCCGGCccaccttggcggcggcaggggcgggagCATGCCCGCAG
cgccctcgtcgtccacggccgcccccctcaccgggccggaggggaagaag
agcgtggTAATTAACGGTCGACGGGGGGCCGCgaacggggagggaggggg
cagtggggcgggggctgggatgggagggaatgggACGGGCccgacggggg
gggagggaagcacggcGGCGCCCGTCTCTtccaagaaagggaaaaacaaa
aagaaggggcagcaacagcagcagcaaggagcGGCTCCCGGGGTCGTGAC
TCCCGCGCCTGTGGAAATCAGCCTCACCCAAGACAATTTCCCCCCACTTT
CCAATCTGCCCGCCCCTGGTGCGTtgggggaggccggaggaaacgagaaa
gcaaggggggaggggcttggCAAAGAGGATAAGCTTCCGCACGCTGCCCC
TCGACCCGTTGCCTCGCACATGCCGACGGTGGGTGGGGACAGGGCTGTCT
CTCACGCCAATCCAAGCACGCTCCCTACACGTCCCTCTCCCATGGTCGAG
AAGAACGACGGGAGTGCCGGTCTGCCTCGTGCCAAGGGAGGCTCCGATGT
CGCGCCGATGGTCCCTGCGAATGCGCTGGAATCCCtccaggacaaggaag
gaggcttaGGAAAAAAGGCAGGAGAATCAGACACGAAACCAGGGGACCCG
GCGTGTGCAGCCAAGGACGCTTCGCTGCCGCCTCCGACGTTGACCGGCTC
TCTGGTTGAGAAGCCCCCAACTTCTACCTCTAcctccaccacatcctcct
cctcctcctccccgacatCCTCCACCGCtaccagcaccagcaccaaCACC
TCGACCCCTGCcctgtccacctcctccgcccctccctcggtgccttcctc
tgccaccacacccaccgcccctccaccggcaccgAAAGGACCGTGGGCCG
CAGCCGTTCTACGCGGGGCCATGCACATCGACCCGTCGGTTCCTGTGCGC
CTGCCCTTGCGAACTGCGGCGCCTGCGTCCCCCTCGGCAGCGGCTAGTGG
GGGCAGTGCTTCCACGGCCGCCAGCAGCCGCGCCAGCAACAACGACAGTG
CGACAGGCGCCGGGTCGAACGtctcggtgggaggggagggagggccaccT
TCGTCAATGTCTACGGCCATCGGGGAGGAAAATCGCAGTGCGGCATCGGT
GGGacggaagaaaatggaagggagtGGGCCTGAAAGGCTCGGCAGCAACA
AACCTACTTCCGTTGAGGCCTTGGCCGAAAGCAGTGGGAAAAATGCAGTG
CCTCCGATCCCAGGGGGGACATCCCCGGccgccaccgcgtcctcgtcctc
gtccccttctTCTGCCCCGGTCGCCAAGGGTCcatggggaagaaagagcT
TTGTGGAGGTCGTTAGGCTGacgggaggcgggcaagccagtggaggagga
gacggcgaagaagagaaaaagtgAATGGACGGCCACGTACTGGGGCCCAT
GCCCTCTGGGGCGTTGgtgggtggcggagggggcgggggagggcgaggga
gagggggagggcgagggggagggatgttCCTTGGGCGCAACGGGCCGTTT
AATTTGCCGTTAcagcaagggggaggacccATGCCCCTTCTTCAGCACCA
GCAAGGTGTTGGCGGGGCACAAAGCATGCCTATGCGGTACCATCAGCagc
caccgccgcctccaggctattcacgccccccccgcggcGTTCCCCATTTT
CCTGGATCGCCCCACGGCCCCTTCCCCGGCGGGCCCATGGTCAtggcggg
aggggggttgCTCCCCGCgatgggacgggggggcaagggaggggatcggT
CCGGGACCGGCCCCCTCGGAGGTCCTGGTGCTCCGCGCGCCACGTCGCAG
CCCACGTCCccaacgggggggggaggagggcgagggttCGAGGGGGGGCA
ACTACCCTCGCAATCGGCACCGGCGCAGGCGAGAAGAAAACAGCCACAGT
CGCAGCAGCCGCACTTTCAGCACGCACAGGCTCCTGGTGGGCAACAGTAC
CATGGCGGACGCatgcaacaacagcagctgCCACAGCTCCTGTCCCATCA
GCATCAGATGCATGCCCAAGAGAGCAtgtttggaggaggggagatggggc
CTCTGCCAGGCACGGGactggggaagaagaagaaagggggaggccaTCAA
TCTCATCCGCAGCAGGGGGCACAGCGGGGGGCCGGGGGTACGCCAGGCCA
ATCGCCGCACCCTGCACACGGCACGGCCGATCCGGCccaccttggcggcg
gcaggggcgggagCATGCCCGCAGcgccctcgtcgtccacggccgccccc
ctcaccgggccggaggggaagaagagcgtggTAATTAACGGTCGACGGGG
GGCCGCgaacggggagggagggggcagtggggcgggggctgggatgggag
ggaatgggACGGGCccgacggggggggagggaagcacggcGGCGCCCGTC
TCTtccaagaaagggaaaaacaaaaagaaggggcagcaacagcagcagca
aggagcGGCTCCCGGGGTCGTGACTCCCGCGCCTGTGGAAATCAGCCTCA
CCCAAGACAATTTCCCCCCACTTTCCAATCTGCCCGCCCCTGGTGCGTtg
ggggaggccggaggaaacgagaaagcaaggggggaggggcttggCAAAGA
GGATAAGCTTCCGCACGCTGCCCCTCGACCCGTTGCCTCGCACATGCCGA
CGGTGGGTGGGGACAGGGCTGTCTCTCACGCCAATCCAAGCACGCTCCCT
ACACGTCCCTCTCCCATGGTCGAGAAGAACGACGGGAGTGCCGGTCTGCC
TCGTGCCAAGGGAGGCTCCGATGTCGCGCCGATGGTCCCTGCGAATGCGC
TGGAATCCCtccaggacaaggaaggaggcttaGGAAAAAAGGCAGGAGAA
TCAGACACGAAACCAGGGGACCCGGCGTGTGCAGCCAAGGACGCTTCGCT
GCCGCCTCCGACGTTGACCGGCTCTCTGGTTGAGAAGCCCCCAACTTCTA
CCTCTAcctccaccacatcctcctcctcctcctccccgacatCCTCCACC
GCtaccagcaccagcaccaaCACCTCGACCCCTGCcctgtccacctcctc
cgcccctccctcggtgccttcctctgccaccacacccaccgcccctccac
cggcaccgAAAGGACCGTGGGCCGCAGCCGTTCTACGCGGGGCCATGCAC
ATCGACCCGTCGGTTCCTGTGCGCCTGCCCTTGCGAACTGCGGCGCCTGC
GTCCCCCTCGGCAGCGGCTAGTGGGGGCAGTGCTTCCACGGCCGCCAGCA
GCCGCGCCAGCAACAACGACAGTGCGACAGGCGCCGGGTCGAACGtctcg
gtgggaggggagggagggccaccTTCGTCAATGTCTACGGCCATCGGGGA
GGAAAATCGCAGTGCGGCATCGGTGGGacggaagaaaatggaagggagtG
GGCCTGAAAGGCTCGGCAGCAACAAACCTACTTCCGTTGAGGCCTTGGCC
GAAAGCAGTGGGAAAAATGCAGTGCCTCCGATCCCAGGGGGGACATCCCC
GGccgccaccgcgtcctcgtcctcgtccccttctTCTGCCCCGGTCGCCA
AGGGTCcatggggaagaaagagcTTTGTGGAGGTCGTTAGGCTGacggga
ggcgggcaagccagtggaggaggagacggcgaagaagagaaaaagtgA back to top
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