EWM30164.1, cds495 (CDS) Nannochloropsis gaditana

Overview
NameEWM30164.1
Unique Namecds495
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1236073..1238109 +
Alignment locationCM002455.1:1238387..1238623 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30164.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100096g1.972.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1236073..1238109 +
CM002455.1supercontigCM002455.1:1238387..1238623 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM30164.1 vs. NCBI_GenBank
Match: gi|585112821|gb|EWM30164.1| (hypothetical protein Naga_100096g1 [Nannochloropsis gaditana])

HSP 1 Score: 1438.32 bits (3722), Expect = 0.000e+0
Identity = 757/757 (100.00%), Postives = 757/757 (100.00%), Query Frame = 0 
Query:    1 MDGHVLGPMPSGALVGGGGGGGGRGRGGGRGGGMFLGRNGPFNLPLQQGGGPMPLLQHQQGVGGAQSMPMRYHQQPPPPPGYSRPPRGVPHFPGSPHGPFPGGPMVMAGGGLLPAMGRGGKGGDRSGTGPLGGPGAPRATSQPTSPTGGGGGRGFEGGQLPSQSAPAQARRKQPQSQQPHFQHAQAPGGQQYHGGRMQQQQLPQLLSHQHQMHAQESMFGGGEMGPLPGTGLGKKKKGGGHQSHPQQGAQRGAGGTPGQSPHPAHGTADPAHLGGGRGGSMPAAPSSSTAAPLTGPEGKKSVVINGRRGAANGEGGGSGAGAGMGGNGTGPTGGEGSTAAPVSSKKGKNKKKGQQQQQQGAAPGVVTPAPVEISLTQDNFPPLSNLPAPGALGEAGGNEKARGEGLGKEDKLPHAAPRPVASHMPTVGGDRAVSHANPSTLPTRPSPMVEKNDGSAGLPRAKGGSDVAPMVPANALESLQDKEGGLGKKAGESDTKPGDPACAAKDASLPPPTLTGSLVEKPPTSTSTSTTSSSSSSPTSSTATSTSTNTSTPALSTSSAPPSVPSSATTPTAPPPAPKGPWAAAVLRGAMHIDPSVPVRLPLRTAAPASPSAAASGGSASTAASSRASNNDSATGAGSNVSVGGEGGPPSSMSTAIGEENRSAASVGRKKMEGSGPERLGSNKPTSVEALAESSGKNAVPPIPGGTSPAATASSSSSPSSAPVAKGPWGRKSFVEVVRLTGGGQASGGGDGEEEKK 757
            MDGHVLGPMPSGALVGGGGGGGGRGRGGGRGGGMFLGRNGPFNLPLQQGGGPMPLLQHQQGVGGAQSMPMRYHQQPPPPPGYSRPPRGVPHFPGSPHGPFPGGPMVMAGGGLLPAMGRGGKGGDRSGTGPLGGPGAPRATSQPTSPTGGGGGRGFEGGQLPSQSAPAQARRKQPQSQQPHFQHAQAPGGQQYHGGRMQQQQLPQLLSHQHQMHAQESMFGGGEMGPLPGTGLGKKKKGGGHQSHPQQGAQRGAGGTPGQSPHPAHGTADPAHLGGGRGGSMPAAPSSSTAAPLTGPEGKKSVVINGRRGAANGEGGGSGAGAGMGGNGTGPTGGEGSTAAPVSSKKGKNKKKGQQQQQQGAAPGVVTPAPVEISLTQDNFPPLSNLPAPGALGEAGGNEKARGEGLGKEDKLPHAAPRPVASHMPTVGGDRAVSHANPSTLPTRPSPMVEKNDGSAGLPRAKGGSDVAPMVPANALESLQDKEGGLGKKAGESDTKPGDPACAAKDASLPPPTLTGSLVEKPPTSTSTSTTSSSSSSPTSSTATSTSTNTSTPALSTSSAPPSVPSSATTPTAPPPAPKGPWAAAVLRGAMHIDPSVPVRLPLRTAAPASPSAAASGGSASTAASSRASNNDSATGAGSNVSVGGEGGPPSSMSTAIGEENRSAASVGRKKMEGSGPERLGSNKPTSVEALAESSGKNAVPPIPGGTSPAATASSSSSPSSAPVAKGPWGRKSFVEVVRLTGGGQASGGGDGEEEKK
Sbjct:    1 MDGHVLGPMPSGALVGGGGGGGGRGRGGGRGGGMFLGRNGPFNLPLQQGGGPMPLLQHQQGVGGAQSMPMRYHQQPPPPPGYSRPPRGVPHFPGSPHGPFPGGPMVMAGGGLLPAMGRGGKGGDRSGTGPLGGPGAPRATSQPTSPTGGGGGRGFEGGQLPSQSAPAQARRKQPQSQQPHFQHAQAPGGQQYHGGRMQQQQLPQLLSHQHQMHAQESMFGGGEMGPLPGTGLGKKKKGGGHQSHPQQGAQRGAGGTPGQSPHPAHGTADPAHLGGGRGGSMPAAPSSSTAAPLTGPEGKKSVVINGRRGAANGEGGGSGAGAGMGGNGTGPTGGEGSTAAPVSSKKGKNKKKGQQQQQQGAAPGVVTPAPVEISLTQDNFPPLSNLPAPGALGEAGGNEKARGEGLGKEDKLPHAAPRPVASHMPTVGGDRAVSHANPSTLPTRPSPMVEKNDGSAGLPRAKGGSDVAPMVPANALESLQDKEGGLGKKAGESDTKPGDPACAAKDASLPPPTLTGSLVEKPPTSTSTSTTSSSSSSPTSSTATSTSTNTSTPALSTSSAPPSVPSSATTPTAPPPAPKGPWAAAVLRGAMHIDPSVPVRLPLRTAAPASPSAAASGGSASTAASSRASNNDSATGAGSNVSVGGEGGPPSSMSTAIGEENRSAASVGRKKMEGSGPERLGSNKPTSVEALAESSGKNAVPPIPGGTSPAATASSSSSPSSAPVAKGPWGRKSFVEVVRLTGGGQASGGGDGEEEKK 757
[Close]
BLAST of EWM30164.1 vs. NCBI_GenBank
Match: gi|553182295|ref|XP_005853709.1| (hypothetical protein NGA_0475100, partial [Nannochloropsis gaditana CCMP526] >gi|422295350|gb|EKU22649.1| hypothetical protein NGA_0475100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 755.362 bits (1949), Expect = 0.000e+0
Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0 
Query:  357 QQQGAAPGVVTPAPVEISLTQDNFPPLSNLPAPGALGEAGGNEKARGEGLGKEDKLPHAAPRPVASHMPTVGGDRAVSHANPSTLPTRPSPMVEKNDGSAGLPRAKGGSDVAPMVPANALESLQDKEGGLGKKAGESDTKPGDPACAAKDASLPPPTLTGSLVEKPPTSTSTSTTSSSSSSPTSSTATSTSTNTSTPALSTSSAPPSVPSSATTPTAPPPAPKGPWAAAVLRGAMHIDPSVPVRLPLRTAAPASPSAAASGGSASTAASSRASNNDSATGAGSNVSVGGEGGPPSSMSTAIGEENRSAASVGRKKMEGSGPERLGSNKPTSVEALAESSGKNAVPPIPGGTSPAATASSSSSPSSAPVAKGPWGRKSFVEVVRLTGGGQASGGGDGEEEKK 757
            QQQGAAPGVVTPAPVEISLTQDNFPPLSNLPAPGALGEAGGNEKARGEGLGKEDKLPHAAPRPVASHMPTVGGDRAVSHANPSTLPTRPSPMVEKNDGSAGLPRAKGGSDVAPMVPAN LESLQDKEGGLGKKAGESDTKPGDPACAAKDASLPPPTLTGSLVEKPPTSTSTSTTSSSSSSPTSSTATSTSTNTSTPALSTSSAPPSVPSSATTPTAPPPAPKGPWAAAVLRGAMHIDPSVPVRLPLRTAAPASPSAAASGGSASTAASSRASNNDSATGAGSNVSVGGEGGPPSSMSTAIGEENRSAASVGRKKMEGSGPERLGSNKPTSVEALAESSGKNAVPPIPGGTSPAATASSSSSPSSAPVAKGPWGRKSFVEVVRLTGGGQASGGGDGEEEKK
Sbjct:    1 QQQGAAPGVVTPAPVEISLTQDNFPPLSNLPAPGALGEAGGNEKARGEGLGKEDKLPHAAPRPVASHMPTVGGDRAVSHANPSTLPTRPSPMVEKNDGSAGLPRAKGGSDVAPMVPANVLESLQDKEGGLGKKAGESDTKPGDPACAAKDASLPPPTLTGSLVEKPPTSTSTSTTSSSSSSPTSSTATSTSTNTSTPALSTSSAPPSVPSSATTPTAPPPAPKGPWAAAVLRGAMHIDPSVPVRLPLRTAAPASPSAAASGGSASTAASSRASNNDSATGAGSNVSVGGEGGPPSSMSTAIGEENRSAASVGRKKMEGSGPERLGSNKPTSVEALAESSGKNAVPPIPGGTSPAATASSSSSPSSAPVAKGPWGRKSFVEVVRLTGGGQASGGGDGEEEKK 401
The following BLAST results are available for this feature:
BLAST of EWM30164.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112821|gb|EWM30164.1|0.000e+0100.00hypothetical protein Naga_100096g1 [Nannochloropsi... [more]
gi|553182295|ref|XP_005853709.1|0.000e+099.75hypothetical protein NGA_0475100, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna495rna495Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications