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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100087g21.1116.mrna |
| Orig protein id | gnl|cribi|Naga_100087g21.1116 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:726819..728857 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4942 ID=rna4942|Name=rna4942|organism=Nannochloropsis gaditana|type=mRNA|length=663bp
ATGGAGAAAATACATGCTTTTCCTGCAGAGGTGCCCCCAGTCCTCACGCC
GCAGTCGAAAAATCGGCATGCTGAAATTGACGCACGCTTTCGCGCACATC
AAGAAGCCCGATTGCAAGCTCGCAAGGACACGAAAGCCAAAGAAAAAGAC
TTTAAGGACCCAAAGGAATCTGTAGGGTATTTTTGGACGGATTTCCGTCG
GGCGTATGACGACGTAGTTCAGGTGTTGAACGCGCTGCTTTCGGAAGAAC
ATGCAGATACGAACATCTCATCTGGCCCTGGCCGGGCAGATAATGTGGAC
GACACACTTTCTCGCATGGATACCAAAATCAAGTCCCTTGACCAGTTGGT
CTCAAATACTGCCCTTTTTCTGCCCCCGTACGACGTGCGACGGGCCCAGG
AGGAAACAGAGAGCCTCCGTAGCAAATTGGAAGAAGTGCGCACAGCGCTG
ATGCCTCGTAAAAGATTCACTTTTGCAGGACGACGGCGCACGGCAAGCGT
CACAAGCTCTTTAATGATGCCTCCCTGTCCGCGGCAGGTGCGTCCAATTT
ATCAGGCGCAATGCCGGGTTTTGGTCCCGCCGCAGACGCCAATTTTACAT
TTGGCCAACTCACCTCCGAGGGCACAGAGGGTCCTCCCAAGGACCTCCTA
CTCCGAGATTTGA back to topprotein sequence of rna4942 >rna4942-protein ID=rna4942-protein|Name=rna4942|organism=Nannochloropsis gaditana|type=polypeptide|length=273bp
MLEHRRNCVRIFVVKDKRRPITMTCFFRFLGLGMTIAPVVLMLTCLLAKD
WTSTTASLVKIDSHAEIYEDDIDFHMGPFRTFMEVTQGDEEVFSKNTYPW
CTQDASTLSHSADRRLCSLLQGVQATSVLAVITGGIAFLLYCMLAFRSLK
GEYVARTARVAMSLHIAQAVLAFLSLGLWLALMRVYQSSLQSSLGPNFAD
FSLPHGRSFYRVVIVGILALVAAGGLHTMAGRSVSAIQKRETIARKRSEF
EMKEAAEAARMQAEEELKVEQLV back to topmRNA from alignment at CM002464.1:726819..728857+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4942 ID=rna4942|Name=rna4942|organism=Nannochloropsis gaditana|type=mRNA|length=2039bp|location=Sequence derived from alignment at CM002464.1:726819..728857+ (Nannochloropsis gaditana)
CTTTGTTTGACCCGATAAGTCGATTTCAACATCTGGATTCCCCTCATTCA
TCACGCCATATTCGCATATGACTAAGTTTGCCATGCGATGCGCGGGCGCT
CGTGGTTGTGGAGCGCTAGTAGAGGTGCAGCAGCTTGGATCAGATCTTGT
ATCATTCTGTCGCTTTATTTATTCCTCCGTATGCCAATCCCGCTGACTAT
TGAGATATCTTTGGTTTTGGCACGGGCCTGTGGTGTCTTATTACGCTCAG
AGTATGCTTGCCCTTAATGTTTTAGTGTACAGACATGTAGGGCAAAATTT
TCATGTGTCCGGTTGGGCGTGAGTCTATCTTCCATTTCACCGGCAGAGGA
GTGCCAAAACAACGCGtcgtcacctccacctcctgatCTATATACGCAAA
CACACCAATGCTCGAACACAGGAGGAATTGTGTCCGTATTTTTGTCGTCA
AGGACAAACGTCGTCCTATCACCATGACCTGCTTCTTCCGATTTCTGGGT
ACGTGCTGTCGAAGAGTGACCGGGCTTTGGTTTGTGAGGTGTACAGGCAG
AACTTCTACGACTGCCATGAGCCAACCTCGGAAGGCATATGCACCATGTG
CATGGCCATGTCATGGGTTCTCACTTTCTTGTTTGACCCGATCGTTCGGC
CATCATGTGGTTGTCTTCAGCTTGCGTTTCGACCCTTTACAtttcctcta
cctccctctccatgcaCGCGCAGGGCTGGGAATGACCATagctcccgtcg
tcctcatGCTCACATGTCTTCTGGCCAAAGGTACGTTTAAGCTATCCTGA
TGGACTTATTTGAAAGCCACGTAATTTCCCAGTTCCACGTGTTAAACCAC
CCGGAaatccttcgtctccttgccAGACTGGACGAGTACTACGGCCAGCC
TGGTGAAGATCGATTCCCACGCAGAGATATACGAAGATGATATCGACTTC
CACATGGGGCCTTTTAGAACATTCATGGAAGTCACGCAGGGAGATGAAGA
GGTTTTTTCCAAGAACACCTACCCCTGGTGCACTCAGGATGCCTCCACAC
TCTCCCATTCTGCGGACCGGCGCCTGTGCTCGCTCCTTCAAGGCGTACAA
GCCACTAGCGTCCTCGCGGTCATCACGGGCGGCATTGCCTTCCTCCTATA
CTGCATGTTagccttccgctccctcaaAGGCGAGTACGTGGCCCGGACAG
CCCGCGTCGCCATGAGCCTGCACATCGCCCAAGCGGTCTTGGCCTTCCTC
AGCCTGGGTTTATGGCTGGCTCTCATGCGTGTCTAtcagtcctccctcca
gtcctCCCTTGGGCCCAACTTTGCTGACTTTTCGTTGCCGCACGGTCGGT
CATTTTACCGCGTGGTCATCGTCGGGATTCtggccctggtggcggccggg
GGGCTGCACACGATGGCGGGTCGCTCTGTGAGTGCCATTCAAAAGAGGGA
GACCATTGCCCGAAAACGGAGCGAGTTCGAGATGAAGGAAGCGGCAGAGG
CTGCGAGAATgcaagcagaggaggaactgAAGGTTGAACAGCTTGTGTAA
CACCTCTTTTGGAAGTGCATCAAAATAGTTAAGCTAGGGAGCTAGCTGTC
TCCAGGAACACGGTGACGAGTTCTACGTCAGAGGCTGGTGTTCGTTTCCA
TGTCTCTATTTTGCGTGTGCACACATTTTGGGGAAAGAATGAGTCGTGGG
GACTGATTGTAGGCAGAACAATGGCAGCATGAGACGAGCGACCGCACTCA
AATAGGGGAAGTGCGAATTTACATATGTTGCACTCTCCGTAACCAGCCAT
TGCATGCTTGATTGGAGAAAGCGCAGAGCAACTGATGGTAGAAAGGAACG
TTGTGATGTTAGGTCAACCGGAAAGACTCTTGAGGTGACTTAGAAGCGGA
GTGACATTTATACACACCATTTTTCATATCAAACTGATACGTCTCTGACA
ATCGGGTTGCAGTGCTACTATATCTGACGGGCACGACAGAGAAAAATGAC
TGGTAAAAGAAATATGCACGACAGCTGGGTCTCAATCAA back to topCoding sequence (CDS) from alignment at CM002464.1:726819..728857+ >rna4942 ID=rna4942|Name=rna4942|organism=Nannochloropsis gaditana|type=CDS|length=2466bp|location=Sequence derived from alignment at CM002464.1:726819..728857+ (Nannochloropsis gaditana)
ATGCTCGAACACAGGAGGAATTGTGTCCGTATTTTTGTCGTCAAGGACAA
ACGTCGTCCTATCACCATGACCTGCTTCTTCCGATTTCTGGGGCTGGGAA
TGACCATagctcccgtcgtcctcatGCTCACATGTCTTCTGGCCAAAGAC
TGGACGAGTACTACGGCCAGCCTGGTGAAGATCGATTCCCACGCAGAGAT
ATACGAAGATGATATCGACTTCCACATGGGGCCTTTTAGAACATTCATGG
AAGTCACGCAGGGAGATGAAGAGGTTTTTTCCAAGAACACCTACCCCTGG
TGCACTCAGGATGCCTCCACACTCTCCCATTCTGCGGACCGGCGCCTGTG
CTCGCTCCTTCAAGGCGTACAAGCCACTAGCGTCCTCGCGGTCATCACGG
GCGGCATTGCCTTCCTCCTATACTGCATGTTagccttccgctccctcaaA
GGCGAGTACGTGGCCCGGACAGCCCGCGTCGCCATGAGCCTGCACATCGC
CCAAGCGGTCTTGGCCTTCCTCAGCCTGGGTTTATGGCTGGCTCTCATGC
GTGTCTAtcagtcctccctccagtcctCCCTTGGGCCCAACTTTGCTGAC
TTTTCGTTGCCGCACGGTCGGTCATTTTACCGCGTGGTCATCGTCGGGAT
TCtggccctggtggcggccgggGGGCTGCACACGATGGCGGGTCGCTCTG
TGAGTGCCATTCAAAAGAGGGAGACCATTGCCCGAAAACGGAGCGAGTTC
GAGATGAAGGAAGCGGCAGAGGCTGCGAGAATgcaagcagaggaggaact
gAAGGTTGAACAGCTTGTGTAAATGCTCGAACACAGGAGGAATTGTGTCC
GTATTTTTGTCGTCAAGGACAAACGTCGTCCTATCACCATGACCTGCTTC
TTCCGATTTCTGGGGCTGGGAATGACCATagctcccgtcgtcctcatGCT
CACATGTCTTCTGGCCAAAGACTGGACGAGTACTACGGCCAGCCTGGTGA
AGATCGATTCCCACGCAGAGATATACGAAGATGATATCGACTTCCACATG
GGGCCTTTTAGAACATTCATGGAAGTCACGCAGGGAGATGAAGAGGTTTT
TTCCAAGAACACCTACCCCTGGTGCACTCAGGATGCCTCCACACTCTCCC
ATTCTGCGGACCGGCGCCTGTGCTCGCTCCTTCAAGGCGTACAAGCCACT
AGCGTCCTCGCGGTCATCACGGGCGGCATTGCCTTCCTCCTATACTGCAT
GTTagccttccgctccctcaaAGGCGAGTACGTGGCCCGGACAGCCCGCG
TCGCCATGAGCCTGCACATCGCCCAAGCGGTCTTGGCCTTCCTCAGCCTG
GGTTTATGGCTGGCTCTCATGCGTGTCTAtcagtcctccctccagtcctC
CCTTGGGCCCAACTTTGCTGACTTTTCGTTGCCGCACGGTCGGTCATTTT
ACCGCGTGGTCATCGTCGGGATTCtggccctggtggcggccgggGGGCTG
CACACGATGGCGGGTCGCTCTGTGAGTGCCATTCAAAAGAGGGAGACCAT
TGCCCGAAAACGGAGCGAGTTCGAGATGAAGGAAGCGGCAGAGGCTGCGA
GAATgcaagcagaggaggaactgAAGGTTGAACAGCTTGTGTAAATGCTC
GAACACAGGAGGAATTGTGTCCGTATTTTTGTCGTCAAGGACAAACGTCG
TCCTATCACCATGACCTGCTTCTTCCGATTTCTGGGGCTGGGAATGACCA
TagctcccgtcgtcctcatGCTCACATGTCTTCTGGCCAAAGACTGGACG
AGTACTACGGCCAGCCTGGTGAAGATCGATTCCCACGCAGAGATATACGA
AGATGATATCGACTTCCACATGGGGCCTTTTAGAACATTCATGGAAGTCA
CGCAGGGAGATGAAGAGGTTTTTTCCAAGAACACCTACCCCTGGTGCACT
CAGGATGCCTCCACACTCTCCCATTCTGCGGACCGGCGCCTGTGCTCGCT
CCTTCAAGGCGTACAAGCCACTAGCGTCCTCGCGGTCATCACGGGCGGCA
TTGCCTTCCTCCTATACTGCATGTTagccttccgctccctcaaAGGCGAG
TACGTGGCCCGGACAGCCCGCGTCGCCATGAGCCTGCACATCGCCCAAGC
GGTCTTGGCCTTCCTCAGCCTGGGTTTATGGCTGGCTCTCATGCGTGTCT
AtcagtcctccctccagtcctCCCTTGGGCCCAACTTTGCTGACTTTTCG
TTGCCGCACGGTCGGTCATTTTACCGCGTGGTCATCGTCGGGATTCtggc
cctggtggcggccgggGGGCTGCACACGATGGCGGGTCGCTCTGTGAGTG
CCATTCAAAAGAGGGAGACCATTGCCCGAAAACGGAGCGAGTTCGAGATG
AAGGAAGCGGCAGAGGCTGCGAGAATgcaagcagaggaggaactgAAGGT
TGAACAGCTTGTGTAA back to top
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