EWM25736.1, cds4930 (CDS) Nannochloropsis gaditana

Overview
NameEWM25736.1
Unique Namecds4930
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:727226..727316 +
Alignment locationCM002464.1:727542..727598 +
Alignment locationCM002464.1:727695..728368 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25736.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100087g21.1116.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:727226..727316 +
CM002464.1supercontigCM002464.1:727542..727598 +
CM002464.1supercontigCM002464.1:727695..728368 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM25736.1 vs. NCBI_GenBank
Match: gi|585107598|gb|EWM25736.1| (hypothetical protein Naga_100087g21 [Nannochloropsis gaditana])

HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0 
Query:    1 MLEHRRNCVRIFVVKDKRRPITMTCFFRFLGLGMTIAPVVLMLTCLLAKDWTSTTASLVKIDSHAEIYEDDIDFHMGPFRTFMEVTQGDEEVFSKNTYPWCTQDASTLSHSADRRLCSLLQGVQATSVLAVITGGIAFLLYCMLAFRSLKGEYVARTARVAMSLHIAQAVLAFLSLGLWLALMRVYQSSLQSSLGPNFADFSLPHGRSFYRVVIVGILALVAAGGLHTMAGRSVSAIQKRETIARKRSEFEMKEAAEAARMQAEEELKVEQLV 273
            MLEHRRNCVRIFVVKDKRRPITMTCFFRFLGLGMTIAPVVLMLTCLLAKDWTSTTASLVKIDSHAEIYEDDIDFHMGPFRTFMEVTQGDEEVFSKNTYPWCTQDASTLSHSADRRLCSLLQGVQATSVLAVITGGIAFLLYCMLAFRSLKGEYVARTARVAMSLHIAQAVLAFLSLGLWLALMRVYQSSLQSSLGPNFADFSLPHGRSFYRVVIVGILALVAAGGLHTMAGRSVSAIQKRETIARKRSEFEMKEAAEAARMQAEEELKVEQLV
Sbjct:    1 MLEHRRNCVRIFVVKDKRRPITMTCFFRFLGLGMTIAPVVLMLTCLLAKDWTSTTASLVKIDSHAEIYEDDIDFHMGPFRTFMEVTQGDEEVFSKNTYPWCTQDASTLSHSADRRLCSLLQGVQATSVLAVITGGIAFLLYCMLAFRSLKGEYVARTARVAMSLHIAQAVLAFLSLGLWLALMRVYQSSLQSSLGPNFADFSLPHGRSFYRVVIVGILALVAAGGLHTMAGRSVSAIQKRETIARKRSEFEMKEAAEAARMQAEEELKVEQLV 273
The following BLAST results are available for this feature:
BLAST of EWM25736.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107598|gb|EWM25736.1|0.000e+0100.00hypothetical protein Naga_100087g21 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4942rna4942Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications