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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100087g22.1126.mrna |
| Orig protein id | gnl|cribi|Naga_100087g22.1126 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:725814..726621 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4941 ID=rna4941|Name=rna4941|organism=Nannochloropsis gaditana|type=mRNA|length=1752bp
ATGTACTCATTGCTGCTCCTCGCCCTATCGGCAACCTCGTCTGCAGCTTT
GCACCATGCACCAGAACAAATCCACATTGCTTTCGGTAAAACGCCGGATA
TTGTCGCCGTGCAATGGTCTACCCGCGTGCTGGAAAGGGCGGAAGGAGGC
GGCCCAGAGGGGCAGCAACCTCGGTCATTCGTGTACTGGGGAAAAGACCC
CACCCATTTGGATGAAGCGGCGGAGGGCCTGAGCATCAGTTTCGTCGACG
GAGGAGCACGCAAACGACAGCAACAGCACCACGTGGTGAACATGACGGGT
TTGGAGGCTTCCACTCGGTATCACTATCAAGTAGGCGATCCGGCCTACGG
GGGCCTCTCGCGTCTGTATTCCTTTAAGACTGCCGCCGACGCCGTCACCC
TCGCAGACGACCTGCCCATCCGGCTGGCCATTTATGGCGACATGGGCGTG
GACAAGAATGGGAGCACGGTGGTTCGCCACCTCTTGGAGCACATGCACGG
GGACCCGGACTATTTGGACGGCGTCTTGCACGTGGGAGACTTCGCCTACG
ACATGGATGAGCGCGACGGCGTGCAGGGGGACCTCTTCATGCGTCAAATC
GAGCCCGTGGCAGCCAGGCTGCCGTACATGACTTCCATGGGCAATCATGA
GAAGGCATACAATTTCTTGCACTACTCGGAGCGCTTCCGGAACATGCCTG
TGTCTGATGGCGAGGTGGCTTCCGCGAACGGGCCCCCGGCTCCCAACAAC
TGGTGGTACTCCTTCAACATAGGACCCGTCCATTTGGTGGCCGTCTCGAC
CGAGATATACGACTTTGGACCTTACGACTACATTCCCCGACAATATCAGT
GGCTTGAGAAAGATCTAAAGGAGGCGAACGCCAACCGCACGCTTGCCCCT
TGGATCATCGTCCACGGCCACAAGCCTCTGTACTGCTCAAGTCCCACGCC
CGCCCAGTGCGATAATTGGTACCGGAGCCAGCGGGAGGGTATCCCCCTCC
GGCCCGAGGCCTCCACGACTGCCGAGATGCGAGGCGACGGCATAGATGCC
TCCCGCTTACGGGGGAAAGGGAGGAAGAGGAAATGGGGTTTGGAGGAGCT
ATTCTACACGTACGGCGTGGACCTATATTTCTGCGGGCACGAACACAATT
CGGAGCGCCTCTTCGACGTGGTGAAGGGGGAGACGGGCCGCCGGACCCGC
GACATGCAGGGGACCACGTACATCGTCACGGGGGCCGGGGGCAACCGGGA
GGGGGTCACGCCCTTCCTCTCCCAGGCCCCGGCGCGGGTGGCGAGTCGAG
CGGAGGTGTGGGGGTACTCGATCTTGGAGGTACACAACGCCACGCATGTG
TACTACGAGCAGCGGGCCTGCGACCGAGGGGAGGGGAGGGAGGGCGAAGG
GAGGCGCTCCGGGAGAAGGGAAGTCTGGCGGTCGCCTAAGGTTCCTCCGA
GAAGCATGGGAGGGGCTTGGACGGAGGGAATCGGTGGAGGGAAAGGCGTC
CCAGCTCTTTCCGTGGACCCGGGCTGTACAGAGAGGCGGTCTCTGTCGTG
GTTTTGTCAGCGCAGACGTGCGTGTGTTCTGGCCTCGGCCCTCCGGTCGA
CCCTGCCAGACCCATACTCCCTCTTGATTGGCGCGGAGCCTCGTGGGCGG
GAACCACACCGCCAGCCGCGCTGTCGGCGTCTCAGAGAAACCAATTTTGC
TCGAAACAACGCGTTTTTGCATTCCATCCCTCCCCATCCACCTCCTCCCT
GA back to topprotein sequence of rna4941 >rna4941-protein ID=rna4941-protein|Name=rna4941|organism=Nannochloropsis gaditana|type=polypeptide|length=220bp
MEKIHAFPAEVPPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEKD
FKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVD
DTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTAL
MPRKRFTFAGRRRTASVTSSLMMPPCPRQVRPIYQAQCRVLVPPQTPILH
LANSPPRAQRVLPRTSYSEI back to topmRNA from alignment at CM002464.1:725814..726621- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4941 ID=rna4941|Name=rna4941|organism=Nannochloropsis gaditana|type=mRNA|length=808bp|location=Sequence derived from alignment at CM002464.1:725814..726621- (Nannochloropsis gaditana)
ATGGAGAAAATACATGCTTTTCCTGCAGAGGTGCCCCCAGTCCTCACGCC
GCAGTCGAAAAATCGGCATGCTGAAATTGACGCACGCTTTCGCGCACATC
AAGAAGCCCGATTGCAAGCTCGCAAGGACACGAAAGCCAAAGAAAAAGAC
TTTAAGGACCCAAAGGAATCTGTAGGGTATTTTTGGACGGATTTCCGTCG
GGCGTATGACGACGTAGTTCAGGTGTTGAACGCGCTGCTTTCGGAAGAAC
ATGCAGATACGAACATCTCATCTGGCCCTGGCCGGGCAGATAATGTGGAC
GACACACTTTCTCGCATGGATACCAAAATCAAGTCCCTTGACCAGTTGGT
CTCAAATACTGCCCTTTTTCTGCCCCCGTACGACGTGCGACGGGCCCAGG
AGGAAACAGAGAGCCTCCGTAGCAAATTGGAAGAAGTGCGCACAGCGCTG
ATGCCTCGTAAAAGATTCACTTTTGCAGGACGACGGCGCACGGCAAGCGT
CACAAGCTCTTTAATGGTGAGTGAGGGTCACGGGCGTACTGACATGGTCG
CAGAGGCCGGAGGGAGGGGGGGAAGCAGACCGAGAGACCGGGGGGCCCTG
GATAAAAGACCGGCCACACCTACCGCCCCATTGCCTGCGGTACCCCCCAA
ATATGCTGCAGATGCCTCCCTGTCCGCGGCAGGTGCGTCCAATTTATCAG
GCGCAATGCCGGGTTTTGGTCCCGCCGCAGACGCCAATTTTACATTTGGC
CAACTCACCTCCGAGGGCACAGAGGGTCCTCCCAAGGACCTCCTACTCCG
AGATTTGA back to topCoding sequence (CDS) from alignment at CM002464.1:725814..726621- >rna4941 ID=rna4941|Name=rna4941|organism=Nannochloropsis gaditana|type=CDS|length=1326bp|location=Sequence derived from alignment at CM002464.1:725814..726621- (Nannochloropsis gaditana)
ATGCCTCCCTGTCCGCGGCAGGTGCGTCCAATTTATCAGGCGCAATGCCG
GGTTTTGGTCCCGCCGCAGACGCCAATTTTACATTTGGCCAACTCACCTC
CGAGGGCACAGAGGGTCCTCCCAAGGACCTCCTACTCCGAGATTTGAATG
GAGAAAATACATGCTTTTCCTGCAGAGGTGCCCCCAGTCCTCACGCCGCA
GTCGAAAAATCGGCATGCTGAAATTGACGCACGCTTTCGCGCACATCAAG
AAGCCCGATTGCAAGCTCGCAAGGACACGAAAGCCAAAGAAAAAGACTTT
AAGGACCCAAAGGAATCTGTAGGGTATTTTTGGACGGATTTCCGTCGGGC
GTATGACGACGTAGTTCAGGTGTTGAACGCGCTGCTTTCGGAAGAACATG
CAGATACGAACATCTCATCTGGCCCTGGCCGGGCAGATAATGTGGACGAC
ACACTTTCTCGCATGGATACCAAAATCAAGTCCCTTGACCAGTTGGTCTC
AAATACTGCCCTTTTTCTGCCCCCGTACGACGTGCGACGGGCCCAGGAGG
AAACAGAGAGCCTCCGTAGCAAATTGGAAGAAGTGCGCACAGCGCTGATG
CCTCGTAAAAGATTCACTTTTGCAGGACGACGGCGCACGGCAAGCGTCAC
AAGCTCTTTAATGATGCCTCCCTGTCCGCGGCAGGTGCGTCCAATTTATC
AGGCGCAATGCCGGGTTTTGGTCCCGCCGCAGACGCCAATTTTACATTTG
GCCAACTCACCTCCGAGGGCACAGAGGGTCCTCCCAAGGACCTCCTACTC
CGAGATTTGAATGGAGAAAATACATGCTTTTCCTGCAGAGGTGCCCCCAG
TCCTCACGCCGCAGTCGAAAAATCGGCATGCTGAAATTGACGCACGCTTT
CGCGCACATCAAGAAGCCCGATTGCAAGCTCGCAAGGACACGAAAGCCAA
AGAAAAAGACTTTAAGGACCCAAAGGAATCTGTAGGGTATTTTTGGACGG
ATTTCCGTCGGGCGTATGACGACGTAGTTCAGGTGTTGAACGCGCTGCTT
TCGGAAGAACATGCAGATACGAACATCTCATCTGGCCCTGGCCGGGCAGA
TAATGTGGACGACACACTTTCTCGCATGGATACCAAAATCAAGTCCCTTG
ACCAGTTGGTCTCAAATACTGCCCTTTTTCTGCCCCCGTACGACGTGCGA
CGGGCCCAGGAGGAAACAGAGAGCCTCCGTAGCAAATTGGAAGAAGTGCG
CACAGCGCTGATGCCTCGTAAAAGATTCACTTTTGCAGGACGACGGCGCA
CGGCAAGCGTCACAAGCTCTTTAATG back to top
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