EWM25746.1, cds4929 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|585107608|gb|EWM25746.1| (hypothetical protein Naga_100087g22 [Nannochloropsis gaditana]) HSP 1 Score: 452.21 bits (1162), Expect = 6.454e-161 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query: 1 MEKIHAFPAEVPPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVTSSLMMPPCPRQVRPIYQAQCRVLVPPQTPILHLANSPPRAQRVLPRTSYSEI 220
MEKIHAFPAEVPPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVTSSLMMPPCPRQVRPIYQAQCRVLVPPQTPILHLANSPPRAQRVLPRTSYSEI
Sbjct: 1 MEKIHAFPAEVPPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVTSSLMMPPCPRQVRPIYQAQCRVLVPPQTPILHLANSPPRAQRVLPRTSYSEI 220
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|673029594|ref|XP_008868758.1| (hypothetical protein H310_05726 [Aphanomyces invadans] >gi|574475153|gb|ETW02153.1| hypothetical protein H310_05726 [Aphanomyces invadans]) HSP 1 Score: 68.1662 bits (165), Expect = 7.096e-10 Identity = 48/161 (29.81%), Postives = 74/161 (45.96%), Query Frame = 0
Query: 9 AEVPPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEK------DFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRR 163
E PP L ++ + R ++AR R+ T ++K E+V FW++F +V + L+ + E + TN+SS L + T +L L + L+LPPYD+R Q T+ L +E RTAL PRK+FTF R +
Sbjct: 74 GEFPPFLVVHDD---VSLEEKVRLVEDARAAQREQTSQRQKAQVSTTSGTSRAEAVDAFWSEFSEKEANVWRTLDTI---EGSSTNVSSA----------LDALCTHTHALRDLAAAATLYLPPYDIRATQALTQRLMQAIEAKRTALAPRKKFTFKARAK 218
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|698801614|ref|XP_009833836.1| (hypothetical protein H257_09341 [Aphanomyces astaci] >gi|574111428|gb|ETV76924.1| hypothetical protein H257_09341 [Aphanomyces astaci]) HSP 1 Score: 67.0106 bits (162), Expect = 2.118e-9 Identity = 49/161 (30.43%), Postives = 73/161 (45.34%), Query Frame = 0
Query: 9 AEVPPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEK------DFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRR 163
+ PP L Q A ++ + R ++AR R+ T ++K F E+V FW++F D V L S E A + +V +L + T + L L + +FLPPYD+R Q T L ++ RTAL PRK+FTF R +
Sbjct: 74 GDFPPFLVVQDD---ASLEEKVRLVEDARAAQRQQTSQRQKAQASATSFTSRAEAVDAFWSEFN---DKEANVRRTLESIEAA----------SPDVGHSLDSLCTDVHGLRDLAAAATIFLPPYDIRATQAVTHRLLQAIDAKRTALAPRKKFTFKARAK 218
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|1026773744|gb|OAE32912.1| (hypothetical protein AXG93_399s1210 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 65.4698 bits (158), Expect = 5.405e-9 Identity = 45/150 (30.00%), Postives = 76/150 (50.67%), Query Frame = 0
Query: 9 AEVPPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTF 158
AEV + +HAE R + RL+ K++ D DP+ESV F F + + V + L + L+ E T+I ++DD + ++ +L++LV++ + FLP YDVR +Q L+ LE + L+P+K+F+F
Sbjct: 6 AEVQAAAAEMLERKHAERLERLALINKNRLEGSSIRKSQAADSSDPRESVDVFLAAFGQKREVVEKGLASALANEVEPTHIKR------HLDD----LALEVGALEKLVADASYFLPAYDVRSSQTTILKLKDDLESASSQLLPKKKFSF 145
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|1069355985|ref|XP_018118059.1| (PREDICTED: tubulin-specific chaperone C-like [Xenopus laevis] >gi|1050377176|gb|OCT79373.1| hypothetical protein XELAEV_18026186mg [Xenopus laevis]) HSP 1 Score: 65.0846 bits (157), Expect = 6.628e-9 Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 0
Query: 78 ALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVTSSLMMPPCPRQVRP---IYQAQC 188
A E A + G A ++D+ R+ + L +L++++ +FLP YD+R+AQE + LEE R AL PR +FTF RR+ A+ +S P P Q RP Q QC
Sbjct: 57 ASFGSEKAAIEKALGSAEAGSLDEAAGRL----QRLQKLLNDSLMFLPSYDIRQAQEAIGRIHGTLEEKRQALQPRGKFTFKSRRKEAATPASQPTPAGP-QSRPREAQNQTQC 165
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|669157882|ref|XP_008614503.1| (hypothetical protein SDRG_10297 [Saprolegnia diclina VS20] >gi|530733859|gb|EQC32101.1| hypothetical protein SDRG_10297 [Saprolegnia diclina VS20]) HSP 1 Score: 64.6994 bits (156), Expect = 1.348e-8 Identity = 59/209 (28.23%), Postives = 98/209 (46.89%), Query Frame = 0
Query: 12 PPVLTPQSKNRHAEIDARFRAHQEARLQARKDTKAK----EKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVTSSLMMPPCPRQVRP-----------IYQAQC-RVLV--PPQTPILHLA 202
PP+L + + ++ + R + AR + R+ T+ K EKD + +V FW F L+AL S+E + N+ L + ++++ ++ +L+LPPYD+R++Q L +++E R+AL PRK+FTF R + AS T+ + P P IY +C VLV P++P L LA
Sbjct: 77 PPLLV---VSDNLSLEEKVRVVENARAEQRETTQRKAALSEKDTR--ATAVDGFWKQFTEMETATRARLDALQSQE-----------PSPNLRAELDSLVAGVQAMRDSAADASLYLPPYDIRQSQAILSRLLAEIEAQRSALAPRKKFTFKARAKKASATTEAITAPSSDAPTPAIAPATLDHELIYADRCDEVLVIDAPESPDLTLA 269
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|971516158|dbj|GAQ82017.1| (hypothetical protein KFL_000980040 [Klebsormidium nitens]) HSP 1 Score: 62.7734 bits (151), Expect = 1.687e-8 Identity = 34/116 (29.31%), Postives = 60/116 (51.72%), Query Frame = 0
Query: 54 PKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVTS 169
P ESV F F +DV + L +L SG G + L ++ +I+SL++ VS+ FLP Y+VR +Q +R +LE +R ++P+++F+F +++ T+
Sbjct: 29 PGESVQQFLDSFGHQMEDVEKRLESL-----------SGQGEGEVSTSELDQLAAEIQSLEKSVSDAVYFLPSYEVRASQGALIQMRGRLEALRAKIVPKRKFSFGAKKKEKESTA 133
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|672117919|ref|XP_008782154.1| (PREDICTED: tubulin-folding cofactor C-like [Phoenix dactylifera]) HSP 1 Score: 60.077 bits (144), Expect = 4.301e-7 Identity = 43/151 (28.48%), Postives = 73/151 (48.34%), Query Frame = 0
Query: 15 LTPQSKNRHAEIDARFRAHQEARLQA----RKDTKAKEKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGR 161
L P ++ +HA + R Q +RLQ R D+ A F+ + + F +D +R+ + + AL +S P A N+ L ++ I LD+LV+ + FLP Y+VR + + L+ L+ + LMPRK+F+F +
Sbjct: 17 LDPIAQMKHATMLERLSNLQRSRLQQSAARRSDSAASSPAFESVRSFLDRF-SDSKRSIEADLACCRAL----------ASDPASAPNLKPELEKVSASIADLDRLVAENSYFLPSYEVRSSLKAISELKEALDSANSELMPRKKFSFKNK 156
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|168032917|ref|XP_001768964.1| (predicted protein [Physcomitrella patens] >gi|162679876|gb|EDQ66318.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 59.6918 bits (143), Expect = 4.980e-7 Identity = 44/171 (25.73%), Postives = 85/171 (49.71%), Query Frame = 0
Query: 15 LTPQSKNRHAEIDARFRAHQEARLQARKDTKAKEKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVT-----SSLMMPPCPRQV 180
L+P + + A+ + R ++H + L ++ DP ESV F F + D L+A+L+++ + S G + V + L + +I +++ LV++++ FLP Y ++ +Q L+ ++E L+P+K+F+F R +TA T S ++P P V
Sbjct: 5 LSPALEKKRAKKEERLQSHLQTYLNDSSARRSLVAASSDPNESVDGFLASFSQCRDQ----LSAILAKKSS----KSDEGALECVREELKSLSLEIVNMESLVADSSFFLPTYIMQSSQSSITKLKEEIEATTAELLPKKKFSF--RSKTAKPTKPVEKSQEILPAIPATV 165
BLAST of EWM25746.1 vs. NCBI_GenBank
Match: gi|1191057489|ref|XP_020906865.1| (tubulin-specific chaperone C-like [Exaiptasia pallida] >gi|999986390|gb|KXJ25529.1| Tubulin-specific chaperone C [Exaiptasia pallida]) HSP 1 Score: 59.6918 bits (143), Expect = 5.355e-7 Identity = 36/146 (24.66%), Postives = 73/146 (50.00%), Query Frame = 0
Query: 25 EIDARFRAHQEARLQARKDTKAKEKDFKDPKESVGYFWTDFRRAYDDVVQVLNALLSEEHADTNISSGPGRADNVDDTLSRMDTKIKSLDQLVSNTALFLPPYDVRRAQEETESLRSKLEEVRTALMPRKRFTFAGRRRTASVTSS 170
++ R E RLQ + + DP+ES F + F + ++ +L S G + +++ D +M TK + L + ++++++FLP Y+++ +Q+ +L+ + E R LMP+K+F F R++ V+S+
Sbjct: 4 DVRKRLAQRNEERLQTINQRRVENDXXXDPEESKDMFLSTFSKERSELEDLLKKCQS---------IGXDK-NSIADHFEQMSTKSQQLQKYLADSSMFLPSYNIKSSQDRLSALQQAINEERERLMPKKKFAFRSRKKEIEVSST 139 The following BLAST results are available for this feature:
BLAST of EWM25746.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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