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Properties
| Property Name | Value |
|---|
| Product | la-related protein 4 |
| Orig transcript id | gnl|cribi|Naga_100090g1.8840.mrna |
| Orig protein id | gnl|cribi|Naga_100090g1.8840 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1234614..1235969 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna494 ID=rna494|Name=rna494|organism=Nannochloropsis gaditana|type=mRNA|length=2428bp
AATTGGGCAGATTCATCGCCTTGGCTAATAATCGAACCTCTCCTTTGGTC
AAATGGTCTATCGGGCTTCGCACCTTGAACTTCGTTGCCGCCTTGAGCCC
CACCCTGGTGGGGTCCCGACGGTCGTCCGCGTTGGTGCCGTTGAACAGCG
CGACCGCTGACGGTGCGGAAGCGTCAGCACCGTTCAATTTGACATGTTGA
AGAGTTTCTGTGCTCCTTCTTTGACTGGAATGCAAAAAGTTGCTTGACAG
GGGGCCGTTCATGTGCGTCCCTGCCACTGCAGCCACAGCTTGTAGGGCCG
TGTACAAATGATTTTTGCAATGAAAACAGCTCATTCCCCGGTTAGCAACG
TACTCCGGCGCAGCACCCTCGTATGTTGGGACCTCCCGCAACGGGATTCC
AATGTGGGCCGCAACTTGACGTGCCAGGGTAAGTTGATTGTCGGGCAGTG
ATGCTGACAAGCCGATGCAGGCGACCGAGTTGCTTGGGAAGACCTGCCGC
ACCAATGCAGCGACTAGGCTGGAATCGACCCCCCCGGAATAAGCAATGAG
GGTCACTCTACAGAACTTGTTTTGTGGTGGTGCAGCAGCACGCCCTTTCC
TTAAGGTTCAAGCACTACTACTTCGAGCCACCGCCTTCATTTCGTTCAGC
GTGTCTTGGTCATCGGGGCAACAGGTCGAGTTGGGGGGTCGACGGTTCGG
GCCCTTCGTAGGCTTCCCGGAGGCACGAAAAACCTTATCAGCGTCGGTGG
TCGAAATGCAGCCAAGTTTAAGAAAGCCAAAGAGCGATGGATGAGCTTAG
AGTCGAAGAAAAACGGTGTGGACACGTTCGACGACGTGGAGTTCGTCCCC
ATGGACCATGAGGATCGGATAGGACTTTTGGCAGCTTTGGCCTCGCACCG
GCCTGACTTAATCATACACACCGCTGGGCCCTTTCAGCGACGGACGGCTC
CTGAAGTTCTCAAAGCGGCTCTTATTTTGAAAGTACCGTACGTGGATGTG
TGTGACGACATACACCTCGCACAGCTCGCCAAAGGCTACGATGGGGCGGC
GCGGAAAGGAAACGTGCCCTGTCTAATTTCCACCGGCGTGTGGCCGGGAA
TATCGTCTCTTATGGCAGTCGATGTAGCTGAAGCCGTAGGCGGAATCGAG
GCCACCGACAAGATCGAATTTGAGTTTTTTACCTCAGGAAGTGGAGGTGC
AGGCACGACAATTTTGAGTGCCACGTTTTTAATATTGTCGGAGAAGGTCC
TGGCCTACGTCAACGGTCGCCCACACTACTATGACGCAGCTTCAGACTTT
CGAAAGGCCGACTTTGGGAAAGGGATTGGGCTGCGACAAGTGTTCCGCAT
GAATCTGCTCGAGGCTTTCAGTTGCCACCGAGTCTTGGGGGTGCCAAACG
TGTCGACTTTCTTCGGAACAGCGCCAAAGGGTTGGAACTATCTACTGAAA
GGCATGGCCATGCTTCCCGCCAAGATTTTGCAAGACCGAGCGTTGATGCA
GGCCTTGGCTGTAGTGTCGGAGCCCTTGGTCCGCCTTGTGGACACGCTGG
TAGGAACTGCAAATGCAATGCGCGTAACAGCGACGAGTAAGGGAGGAACG
GAGTCCGCAACAGCCCTGTATGCCCACGAGGATTTGGAAACTTGCGTGGG
GGAGGGCATCGCCGCTTTTGCGGCGCAAGTGCTTGATGGCAAGGTGGCTC
CTGGTGTATGGTACCCGGAGGAGGCATTTGCTTCTTTGGAAGGTAGAAGA
GACGTTTTTCGATTGGCGACCAAAGGATGTTCAAATTGGGAGCGCCCAGC
TGGGATAGATGCAAGGGGACGTCAAAGCGTTGCACAATCGTGCACATGAC
CGGGCCTGGGATGATGGCGGGACTGATGTATGAAGGTAATGGTTAATGCA
TGAAATAAATGTGACGCATGTATTTGTAGCTACAGCTCTCAGACGCGTCT
CTTTTGTGGTGAAACTAGTAAGAAAATCGTGATCTTTTCAATTTTTCTGT
CTTACGAGGAGCGCTGATTCTTTCTCTTCATTTCAAACCGGCCATTCGAC
ATCAGGAATTAAAGATTAAATTTAAATAAACCTCATGATGATATATTTCT
AATAAAACGAAATGAAATTTATGCTTAGCAGCAGTATCCTGTTCCCAGCC
TTCGCAACACGTTGAAAAACTAGGACTGAAATCCGGCAAGGTATGTCGTG
GCTTGCGGAATGAACAAGGGATAAAATCTGACGCACTGGAATTGAGGTCT
CAATCAAATTGATAAGGTGTAAAAAATATTTGTGTAGGTTTTTCATCAGA
GGGATAACCTACGCTATGCATCAAATTGTGTTATCAAAATAATTAGGAAT
TTCAGTAGAGTAACGACATCGGATTGTAAATCCTAGCTCGCAGCGACTTC
AACGCCGGGAAGGAAAAAAAACTGTCCT back to topprotein sequence of rna494 >rna494-protein ID=rna494-protein|Name=rna494|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp
MTDSKKDATLATLAMAPSSTAPAVSTDSSTTKSSSSADNGRGGSTLAVAL
REVVEDLFSPSKLAVHPVLSGTLNTQGSVPLPVLAQLAEIQAAWSTAKKT
SGGKKGEGGKEEGRELSAEGGQDVVGVLVEAVQMSRLVQLSDDGGGARPR
VARSTIIARELPPAVTEADVRALFQKWAEAVLEVRCEHGLWYIKLAGEDD
AKAAFQALNGTPVEGQPLRLRIRPEVGQAVYGGFTPQSNTGPGAHMGGGA
GRRGGGGGRGRERASGRSTFVAKSAGRDDDGPRASVRTSGNAACRHLSWG
WRASATAATACAPPAPPPPVPSASAQRLHDDRGRIGCTFH back to topmRNA from alignment at CM002455.1:1234614..1235969+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna494 ID=rna494|Name=rna494|organism=Nannochloropsis gaditana|type=mRNA|length=1356bp|location=Sequence derived from alignment at CM002455.1:1234614..1235969+ (Nannochloropsis gaditana)
AACCTtgtcctcacctccccctccaccacacaCCCTCCGCTGCAGCCGGA
ATACTCGTTCTTCTACttgcctcccccagccctcctGTGCtgtgccgccg
ccgccctaATTGTGGGTTCCCGTCGGTCTCTTTGCACGTCAACTTACGCG
TAGGCATTCGCTTGTCACACTGGTGTTGTTGACGGCGCATCTTGCGGCAG
CAGTGGAGGGCGGGTCTGACCAGTCGTGAGTGTGCAGTCTCAGGAGCGGA
GTACAGACGTTGCGCCCACCAGGCCTCAGAAAACGACGACATTCGGGGCC
TGCTTGGTCATCACCACGAACGTGAAGGGACTGTCATGACAGACAGCAAA
AAGGATGCAACTTTGGCAACGCTGGCCAtggccccttcttccaccgcccc
ggcGGTCAGCACAGATAGCAGCACCAcaaaaagcagcagcagcgccgACA
ACGGCCGCGGCGGCAGTACATTGGCAGTAGCTCTCCGGGAGGTAGTGGAG
GATctattttctccctccaaacttGCGGTGCACCCGGTTTTGTCGGGCAC
TTTAAACACGCAGGGTTCCGTACCTCTGCCCGTCTTGGCTCAGTTGGCTG
AGATCCAAGCAGCCTGGAGCACGGCCAAAAAGAcgagcggagggaagaag
ggggagggcgggaaagaggaagggcgggagttGAGTgcagagggcgggca
ggatgTGGTGGGAGTGTTGGTGGAGGCTGTGCAAATGTCGCGTTTGGTGC
AGCTCTCAGACGACGGCGGAGGCGCCAGGCCCCGGGTGGCGCGAAGCACC
ATCATTGCGCGAGaactccctcccgccgtgaCAGAAGCGGACGTCCGCGC
GCTCTTTCAAaagtgggcggaggcggtgctgGAAGTCCGGTGTGAGCATG
GGTTGTGGTACATCAAgttggcgggggaggacgatgccAAGGCGGCTTTT
CAGGCGCTGAACGGGACCCCGGTGGAAGGGCAGCCCCTGCGGCTTAGAAT
ACGTCCAGAGGTGGGCCAAGCCGTGTACGGTGGCTTCACTCCCCAGTCGA
ACACGGGGCCCGGGGCACacatgggggggggcgccgggaggagggggggg
gggggagggaggggccgggaaAGGGCGTCTGGGAGGAGCACCTTCGTCGC
CAAGAGCGCCGGGAGGGATGATGATGGGCCCAGGGCGTCCGTTAGGACCA
GCGGGAATGCTGCATGTCGGCACCTAtcctgggggtggcgggcTTCTGCC
AccgcagcaacagcatgCGCACCCCCcgcacccccaccacctgtcccttc
cgcctccgcacAACGCCTACATGATGACCGGGGGAGGATTGGGTGCACCT
TTCATC back to topCoding sequence (CDS) from alignment at CM002455.1:1234614..1235969+ >rna494 ID=rna494|Name=rna494|organism=Nannochloropsis gaditana|type=CDS|length=1021bp|location=Sequence derived from alignment at CM002455.1:1234614..1235969+ (Nannochloropsis gaditana)
ATGACAGACAGCAAAAAGGATGCAACTTTGGCAACGCTGGCCAtggcccc
ttcttccaccgccccggcGGTCAGCACAGATAGCAGCACCAcaaaaagca
gcagcagcgccgACAACGGCCGCGGCGGCAGTACATTGGCAGTAGCTCTC
CGGGAGGTAGTGGAGGATctattttctccctccaaacttGCGGTGCACCC
GGTTTTGTCGGGCACTTTAAACACGCAGGGTTCCGTACCTCTGCCCGTCT
TGGCTCAGTTGGCTGAGATCCAAGCAGCCTGGAGCACGGCCAAAAAGAcg
agcggagggaagaagggggagggcgggaaagaggaagggcgggagttGAG
TgcagagggcgggcaggatgTGGTGGGAGTGTTGGTGGAGGCTGTGCAAA
TGTCGCGTTTGGTGCAGCTCTCAGACGACGGCGGAGGCGCCAGGCCCCGG
GTGGCGCGAAGCACCATCATTGCGCGAGaactccctcccgccgtgaCAGA
AGCGGACGTCCGCGCGCTCTTTCAAaagtgggcggaggcggtgctgGAAG
TCCGGTGTGAGCATGGGTTGTGGTACATCAAgttggcgggggaggacgat
gccAAGGCGGCTTTTCAGGCGCTGAACGGGACCCCGGTGGAAGGGCAGCC
CCTGCGGCTTAGAATACGTCCAGAGGTGGGCCAAGCCGTGTACGGTGGCT
TCACTCCCCAGTCGAACACGGGGCCCGGGGCACacatgggggggggcgcc
gggaggagggggggggggggagggaggggccgggaaAGGGCGTCTGGGAG
GAGCACCTTCGTCGCCAAGAGCGCCGGGAGGGATGATGATGGGCCCAGGG
CGTCCGTTAGGACCAGCGGGAATGCTGCATGTCGGCACCTAtcctggggg
tggcgggcTTCTGCCAccgcagcaacagcatgCGCACCCCCcgcaccccc
accacctgtcccttccgcctccgcacAACGCCTACATGATGACCGGGGGA
GGATTGGGTGCACCTTTCATC back to top
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