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Properties
| Property Name | Value |
|---|
| Product | fatty-acyl elongase |
| Orig transcript id | gnl|cribi|Naga_100162g4.1253.mrna |
| Orig protein id | gnl|cribi|Naga_100162g4.1253 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:695787..698189 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4930 ID=rna4930|Name=rna4930|organism=Nannochloropsis gaditana|type=mRNA|length=3019bp
ACAACGGGGTTGATTCAGACGCGTTCTTGTGCCCGGATGTCCCACTCTTC
ATTTTTATCCGAACGCCGGCCCCCGTCGGCCCTCTCGCTGATTAAATTCC
ATCCCCTTCAGACCAATGTACCCGGTCTGTCCCACCACAACCTCGAGCCC
CGTCCTCACCCGCTGTGCGGTCTCCGACCCCCATTCTGCACACAGCGTGC
CCATGGCAGCAGACAGAGACGACCACTCCTTGGTGGAAAGTGAAGGTCGG
GCCACCGCCGCCCTCCCTATTGGGGACCCCGCGAGCGAGGCCGCAGCAGC
CGGAACAGGACCCTGCAACGAGGAGTTTCAAGAGCTACTAGAAAGCCTCC
ACAATGAATTGGATGAGGTCACAAAGAAGAAGGCCTCAGTGGAGGCTGCT
TTAGGCGATGAATTGGATTCGTTGCTTATCGTCGAGGCAACTAAGGCAGT
GCCTGCCCCGGATGGAAAGCAACTCGCCCTTCAAATGAAGGACTTGGAGA
AAGCTTTTGCACCCACCAGGGTGGCCCACCTGACTGCAAAAGTCAGTGCA
TTGACGGAACACGTGTATGGGTGCCAAGAGCTTGCGGATAAGATGAGTTC
CAGCGTCCGGGAGCTCGACGAACGGCAAATGCGGGTGCAGCGGGTGTTGG
CCATGGTGGAAGACATCATAAATCTTAAAACCTGCGCGGAGGGTGTGGCC
CGTGCCCTGGAGGAAGATGATCTCCTTGGTGCTACCAGCTACGTGCGCCA
ATTCCACAGCATTGAGGGAGCATCCGCAAAGGCATCGGGGCATTACAATG
TCCTCGTGGCCGCGGAGGCGCGGTTGAAGGAGACGGTGTTGAGAAGGGTG
CACTTGGCGGTCTCACGGTCCGAGCTGGACGACGTGTTCAAATTCTGCCC
GCTTCTGGGTCCCTTGGGCCTGGCCAAGGAAGGCGCGAGCATTTACGAGT
CCTTCGCGGAGCGGCTGCTGAAAGAGGGGCTCGACCCCCTGGCCGCGGAG
ACGAATAAGCTCCCGGCCGTACAGCTGTTGCCCAAGATCTACAACACCGC
GGCAGGTTTTTTGCAGCGTCATTTGCCCTTGGTGTCGCACGGCTTCAAAC
AGGTGGACGCGGACGTGTCTTTGATCCGCCTGGTCCAGCGAGAGTGCGAG
GATGCGGCCATCCCGGTGATTCGTCGGTTTCTGGAGGACAAAGGCGTGGC
CGAGAAGTGCCGCGCGGTGGCGGAGGCCAGCCGCGGCGACAATGGGTTGG
ACGGTGGGGCATTTTACGCCCGGAAGGAGGGGGGCCATCGCCGACGAGGA
GCGCAGGCTTCGGGCGGCGAGGGAGAGGAGGCGTTACCCATCGGGGAGAT
GGACGGGCTGATGGACGCGCTCGCCCTCGTGATACAGCACACGGAGAGCT
ACGACCGGTTCCTGCGACACGTGGCGGCCGAGATTCTGGAGACGGGCCGG
GACCTGGGAGCGCCCGTCTTGCCGGCGGTCACGGATTTGAACGGGGCGGT
GGCGGAGGTCGCCGGGCCCTTCGCCCTGTTGGAGGACTATGTGATGCGCG
CCTCCATCGCCAAGGCTCTGCAGATCGACGAGCTACCCGCCCTGGCCCCG
CTCTCGCTCGTGCAGGCAGGCACCTCCCTCGTGGCCTCGGGAGCAGGGAT
TGCCTCCATCGGCGAGGGCGACGACCTGCTCCTCAGCACCGGCCGTGGGG
ACTCTCCCCTCACCTCGAGCGCCGTAGACGACAGCTTCTACGTGCTCAGG
CGGTGCGCTCGACGTGCCTTGGTCACCGGGCACGCAGGGACGGCCTCCGC
CATCATCAATTACATCAACGGTGCCCTCTCGGACGAGCTCATGTCCGTCT
TGAGCGCCAAAGTCCGGTCTCTTCGAGAGCTCCCTCTGCCAATCGGGCTG
CTCCCCGCCGCCTCCTCTTTGGGGGCACCCGTTGCAGGTACAGCGGTGGT
AGCTGTCAAGCAGCATTGGAGCAAAGTGAAGGAGGGAATAGGTGCGGGAC
TGGAGACTGCGCAACAGCTCACCGCGGCTGCGGGGTCTTTGATGGGCGGC
GCTGCCGGCGTGGGCCTGGGCGGGGGGGGATTGGGGGCGGTGACTTGTTA
CCCTTACGAGGAGGCGAAGAACGCTTTGGATCGTCTGGTCATGCTGAACA
ACCTGTCCGCCTGCGCGCGCTACACTCTTAAATTGCAGCAAGAATTGATG
GCCGAGGTTCCCTCCATTTTCCAGGACGACCCACCGACGCAGCAGCTCAT
GGCGTGCCTGCAGGACATGTCGGTGACGGCGAAGCACTTCGAGCAGACGG
TGGACGAGGGTTTGCAGCACGTGGCGGCACTCATCAAGCCCAAGTTGCGC
AGCTTCCTCCAGGACGCGTTGGGGGTGGCACAGGCCGTGGGGAAAGGGCA
AGGAGGGGATGCGGGCCAGGGGGGGGCGAGAGGGGGCAGCAAGGTTTCCT
ACGAGTTGGACGAGGACGAGTTTGCAGCCAATGAGGCGGCAGATCCATTC
ATGAATCGGTTCCTTGAGTTTTTGGGGGGGTTGCTGGGACCGATATCCCT
ACGGCTTACGGGACGAAATTTCAGTGTCCTGAAAATGTCGGTGGTGGCCT
ACATGGCCAAGCGTTTGGAGTATTTGCTGATGCGGCTACCCTTCACACAA
CTGGGTGCTTTGCAGCTCGATAAAGATCTGCGCTGCTTGATAGCCTTCTT
TCCATCGTCCACGGGCTATGGCGATTATAGCGAGACTGGTCAAGAGAGCG
GACGAGTTCGAGATTGTTTCGCTCGCCTTATGCAGATGAGTCATTTGCTG
AACCTTGATGTCCCTACAGACATAGTAGATGTCTTCGGAGGTAACAGCAT
GAAGCTCACAGTTGAAGAAGCGCTCAACATCATGAGGTTGCGAACTGATT
GGGAAGAGGTTGAAATCTGCAAAGCTCAGGAACATCTGCTTATGACATTA
TCAAACGGAATATCTTCCGACACACTATGAAAGCCATGAATTGAAAGAAC
GTTGTAAAGTATCGTGCTG back to topprotein sequence of rna4930 >rna4930-protein ID=rna4930-protein|Name=rna4930|organism=Nannochloropsis gaditana|type=polypeptide|length=320bp
MRPASKMTTAVCTSQWYCPPETLTATTRVYTARNTTYSFIQFWQLYPWLE
NFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLK
NLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYING
DGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAA
HEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQM
LVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF
VKNARAGQEGKVAASAKKNI back to topmRNA from alignment at CM002464.1:695787..698189+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4930 ID=rna4930|Name=rna4930|organism=Nannochloropsis gaditana|type=mRNA|length=2403bp|location=Sequence derived from alignment at CM002464.1:695787..698189+ (Nannochloropsis gaditana)
TTTCCACGTTTTTATTGCTCGTTGCTTCAATTAACAAATGATTTGCGTTG
ATAGGTATATTTTCACCTTTGTAATTTGGTCTAAATATGTGGTCGTTTGT
TATTCACGCAAGCAGGTCGAGCTTTTTGTAAAAGCTTACGATTCTGACCG
AATGGAAGCCCGTTTCTTTGAAAGGCGTTGTCTGTACTCCACCATATGCT
GAGCGTCTCCGCAGAAGTACATTTTTAAGAGTGCATTTTAAAGGCAATCT
GAAATAGGACAAAAAACACAAATAAGATGAGTGCCGCACGATGTTTGCTT
ACGCGGTGATATTGATACTGCTGACTGTGAAGCATTATTTATATCATCTT
CCCTAGTGGCCTCGAGTATTTTCTTGAAAAGACTTTCTGCGTCTTAAGGA
AGCTCTTTGTCTTAATTCgtcttttctttcacatATGAGACCAGCTTCAA
AAATGACGACAGCCGTTTGCACAAGCCAATGGTATTGCCCCCCGGAGACT
TTGACGGCCACCACCCGTGTCTATACCGCACGAAATACAACTTATTCCTT
CATCCAGGTATGTAAAAATTAACAAACGCCTTTTCTGCGCTCCATCCTGC
CGAAAAAGAGCCAAGAGGGTAAAATGATTGCCTTTAGGCACATTTTAGGC
AACTGACTTCTTGTGGACTCTCAGCTACCCTGGAATGTCAAGTTAAACAA
ACGGACAACTATGCCCTTCCTTGCCAACAAATCAAAAATCAATTTCTGTA
CACTTGACTTCATCTTACCATACAATCCCTACGCATCCTCCGTATTCATT
TGTAGTTCTGGCAACTTTATCCATGGCTGGAGAACTTTTACGCCCCGTTC
GAGAAAAACTTCAACCCCTTGCCGATATTTGAGTTTGTGAGCGGGAACTG
GTGGGTCGTTTACATTTCTCTGGCCATCTACATGTCCATGATCATCTTCC
TGCCCATGATCATGAAGAAGCGCCCCCTGAAAAACCTGAGCACGCCACTT
GCGTGCTGGAACCTCTTTCTGGCTGTGTACAGCACCATTGGCGCCGTTCG
CGTGGTCCCCCACTTGCTGTGGTTCATGTCCACGCACACCTTCAAGCAGA
CTGTCTGCACAGCCCCCTACTACATCAATGGGGACGGTGCCACGGGGCTG
TGGGTGACGCTTTTCACGCTCTCCAAGGTGGCGGAGCTCATCGACTCTCT
CTGGATATGTTTGAAGGGACGTAGGCCCATCTTTTTGCACTGGTAGGTGT
CAGACAATGTTTTTTCGTCCAGGCGTGGGGGGTGGCGAAGAGAAGACACT
TTCGTCGTGGTGCCTTATGCGGTCCTCcccctggaagagggagcttGCGT
GGCAGCGTCTAACGTCAGATGATCTTTCCCTCAATCTTCACAGGTACCAT
CACGTCTCGGTGCTCTACTTTACATGGGCCGCGCACGAGGCTGCTCACCC
GGGCATGTACTTCATCGCCATGAACTACACGGTGCACTCAGTCATGTATA
CCTACTACTTTCTGATGGCCATCAAGGCGAAGCCCAAATGGCTCAAGTAC
GTAAAGGGAGGTAGATTTCTACGAGAGTCAGTTGTGTGGCCCGGATTTCT
CCTTTAAGATCATCCCTCTTGACGAATTCGTGCCTGtagccctccttgcc
cttgccATCGCTCCGTGCATAACTCGTAAAAGCAGGTCTTACTTGTCTGA
AggtttctcttccctctttcttcctatTGTAGCCCTATCTACATCACATT
CATGCAAATTGCACAAATGCTGGTGGGCGTCATCATTTCCTGCTTTGGGT
TCTACTATTCCTCTATGGACGCTTCTTGCGCTGTCGACCCCTTCGTCCTG
AAAGTGTCTGCGGTCATCTATGCGTCTTACCTATACTTGTTCATGCAGTT
CATGATCAAGCGTTTCTTCGTCAAGAATGCCAGGGcaggacaggaaggga
aggtggcaGCGTCAGCTAAGAAGAATATTTAGGGAATAGGGAGGGCCAAC
TATGTATTCTGCTCAAGCTCGTCCACCTAACCTCTACTATATATGGTGGC
CCAGTGTATTTTACTCGCACTTAGAGAAAAACAAATAAAGACAACACCCT
GCGTGTGACATGTATAACCAAAGTGGGGCTTCATAAAGGTCCTATTGATG
GAACGCGTGCGACCGCCGTACTCACGCCTGCAAGGGGCATCGTCCGCTTT
CAAGAAATTTCAAGAACTATGAACAGTGCTTGTCCATAATATAAAATAGT
CTAGGATGTCGGGTGGTTGTTATGTGAAGAAGGTATGAGGCGGCCATCAC
ACGCATGTAGGGTGCTGTCCTAAAAATGACAGGCTCCGGAGGCGGTCGTA
AATGAACGACGAATAAAGAATGCAAGGACAAATTGAAACAGCCAAAGATT
TTT back to topCoding sequence (CDS) from alignment at CM002464.1:695787..698189+ >rna4930 ID=rna4930|Name=rna4930|organism=Nannochloropsis gaditana|type=CDS|length=3852bp|location=Sequence derived from alignment at CM002464.1:695787..698189+ (Nannochloropsis gaditana)
ATGAGACCAGCTTCAAAAATGACGACAGCCGTTTGCACAAGCCAATGGTA
TTGCCCCCCGGAGACTTTGACGGCCACCACCCGTGTCTATACCGCACGAA
ATACAACTTATTCCTTCATCCAGTTCTGGCAACTTTATCCATGGCTGGAG
AACTTTTACGCCCCGTTCGAGAAAAACTTCAACCCCTTGCCGATATTTGA
GTTTGTGAGCGGGAACTGGTGGGTCGTTTACATTTCTCTGGCCATCTACA
TGTCCATGATCATCTTCCTGCCCATGATCATGAAGAAGCGCCCCCTGAAA
AACCTGAGCACGCCACTTGCGTGCTGGAACCTCTTTCTGGCTGTGTACAG
CACCATTGGCGCCGTTCGCGTGGTCCCCCACTTGCTGTGGTTCATGTCCA
CGCACACCTTCAAGCAGACTGTCTGCACAGCCCCCTACTACATCAATGGG
GACGGTGCCACGGGGCTGTGGGTGACGCTTTTCACGCTCTCCAAGGTGGC
GGAGCTCATCGACTCTCTCTGGATATGTTTGAAGGGACGTAGGCCCATCT
TTTTGCACTGGTACCATCACGTCTCGGTGCTCTACTTTACATGGGCCGCG
CACGAGGCTGCTCACCCGGGCATGTACTTCATCGCCATGAACTACACGGT
GCACTCAGTCATGTATACCTACTACTTTCTGATGGCCATCAAGGCGAAGC
CCAAATGGCTCAACCCTATCTACATCACATTCATGCAAATTGCACAAATG
CTGGTGGGCGTCATCATTTCCTGCTTTGGGTTCTACTATTCCTCTATGGA
CGCTTCTTGCGCTGTCGACCCCTTCGTCCTGAAAGTGTCTGCGGTCATCT
ATGCGTCTTACCTATACTTGTTCATGCAGTTCATGATCAAGCGTTTCTTC
GTCAAGAATGCCAGGGcaggacaggaagggaaggtggcaGCGTCAGCTAA
GAAGAATATTTAGATGAGACCAGCTTCAAAAATGACGACAGCCGTTTGCA
CAAGCCAATGGTATTGCCCCCCGGAGACTTTGACGGCCACCACCCGTGTC
TATACCGCACGAAATACAACTTATTCCTTCATCCAGTTCTGGCAACTTTA
TCCATGGCTGGAGAACTTTTACGCCCCGTTCGAGAAAAACTTCAACCCCT
TGCCGATATTTGAGTTTGTGAGCGGGAACTGGTGGGTCGTTTACATTTCT
CTGGCCATCTACATGTCCATGATCATCTTCCTGCCCATGATCATGAAGAA
GCGCCCCCTGAAAAACCTGAGCACGCCACTTGCGTGCTGGAACCTCTTTC
TGGCTGTGTACAGCACCATTGGCGCCGTTCGCGTGGTCCCCCACTTGCTG
TGGTTCATGTCCACGCACACCTTCAAGCAGACTGTCTGCACAGCCCCCTA
CTACATCAATGGGGACGGTGCCACGGGGCTGTGGGTGACGCTTTTCACGC
TCTCCAAGGTGGCGGAGCTCATCGACTCTCTCTGGATATGTTTGAAGGGA
CGTAGGCCCATCTTTTTGCACTGGTACCATCACGTCTCGGTGCTCTACTT
TACATGGGCCGCGCACGAGGCTGCTCACCCGGGCATGTACTTCATCGCCA
TGAACTACACGGTGCACTCAGTCATGTATACCTACTACTTTCTGATGGCC
ATCAAGGCGAAGCCCAAATGGCTCAACCCTATCTACATCACATTCATGCA
AATTGCACAAATGCTGGTGGGCGTCATCATTTCCTGCTTTGGGTTCTACT
ATTCCTCTATGGACGCTTCTTGCGCTGTCGACCCCTTCGTCCTGAAAGTG
TCTGCGGTCATCTATGCGTCTTACCTATACTTGTTCATGCAGTTCATGAT
CAAGCGTTTCTTCGTCAAGAATGCCAGGGcaggacaggaagggaaggtgg
caGCGTCAGCTAAGAAGAATATTTAGATGAGACCAGCTTCAAAAATGACG
ACAGCCGTTTGCACAAGCCAATGGTATTGCCCCCCGGAGACTTTGACGGC
CACCACCCGTGTCTATACCGCACGAAATACAACTTATTCCTTCATCCAGT
TCTGGCAACTTTATCCATGGCTGGAGAACTTTTACGCCCCGTTCGAGAAA
AACTTCAACCCCTTGCCGATATTTGAGTTTGTGAGCGGGAACTGGTGGGT
CGTTTACATTTCTCTGGCCATCTACATGTCCATGATCATCTTCCTGCCCA
TGATCATGAAGAAGCGCCCCCTGAAAAACCTGAGCACGCCACTTGCGTGC
TGGAACCTCTTTCTGGCTGTGTACAGCACCATTGGCGCCGTTCGCGTGGT
CCCCCACTTGCTGTGGTTCATGTCCACGCACACCTTCAAGCAGACTGTCT
GCACAGCCCCCTACTACATCAATGGGGACGGTGCCACGGGGCTGTGGGTG
ACGCTTTTCACGCTCTCCAAGGTGGCGGAGCTCATCGACTCTCTCTGGAT
ATGTTTGAAGGGACGTAGGCCCATCTTTTTGCACTGGTACCATCACGTCT
CGGTGCTCTACTTTACATGGGCCGCGCACGAGGCTGCTCACCCGGGCATG
TACTTCATCGCCATGAACTACACGGTGCACTCAGTCATGTATACCTACTA
CTTTCTGATGGCCATCAAGGCGAAGCCCAAATGGCTCAACCCTATCTACA
TCACATTCATGCAAATTGCACAAATGCTGGTGGGCGTCATCATTTCCTGC
TTTGGGTTCTACTATTCCTCTATGGACGCTTCTTGCGCTGTCGACCCCTT
CGTCCTGAAAGTGTCTGCGGTCATCTATGCGTCTTACCTATACTTGTTCA
TGCAGTTCATGATCAAGCGTTTCTTCGTCAAGAATGCCAGGGcaggacag
gaagggaaggtggcaGCGTCAGCTAAGAAGAATATTTAGATGAGACCAGC
TTCAAAAATGACGACAGCCGTTTGCACAAGCCAATGGTATTGCCCCCCGG
AGACTTTGACGGCCACCACCCGTGTCTATACCGCACGAAATACAACTTAT
TCCTTCATCCAGTTCTGGCAACTTTATCCATGGCTGGAGAACTTTTACGC
CCCGTTCGAGAAAAACTTCAACCCCTTGCCGATATTTGAGTTTGTGAGCG
GGAACTGGTGGGTCGTTTACATTTCTCTGGCCATCTACATGTCCATGATC
ATCTTCCTGCCCATGATCATGAAGAAGCGCCCCCTGAAAAACCTGAGCAC
GCCACTTGCGTGCTGGAACCTCTTTCTGGCTGTGTACAGCACCATTGGCG
CCGTTCGCGTGGTCCCCCACTTGCTGTGGTTCATGTCCACGCACACCTTC
AAGCAGACTGTCTGCACAGCCCCCTACTACATCAATGGGGACGGTGCCAC
GGGGCTGTGGGTGACGCTTTTCACGCTCTCCAAGGTGGCGGAGCTCATCG
ACTCTCTCTGGATATGTTTGAAGGGACGTAGGCCCATCTTTTTGCACTGG
TACCATCACGTCTCGGTGCTCTACTTTACATGGGCCGCGCACGAGGCTGC
TCACCCGGGCATGTACTTCATCGCCATGAACTACACGGTGCACTCAGTCA
TGTATACCTACTACTTTCTGATGGCCATCAAGGCGAAGCCCAAATGGCTC
AACCCTATCTACATCACATTCATGCAAATTGCACAAATGCTGGTGGGCGT
CATCATTTCCTGCTTTGGGTTCTACTATTCCTCTATGGACGCTTCTTGCG
CTGTCGACCCCTTCGTCCTGAAAGTGTCTGCGGTCATCTATGCGTCTTAC
CTATACTTGTTCATGCAGTTCATGATCAAGCGTTTCTTCGTCAAGAATGC
CAGGGcaggacaggaagggaaggtggcaGCGTCAGCTAAGAAGAATATTT
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