EWM25754.1, cds4918 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|585107617|gb|EWM25754.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0 Query: 1 MRPASKMTTAVCTSQWYCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNARAGQEGKVAASAKKNI 320 MRPASKMTTAVCTSQWYCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNARAGQEGKVAASAKKNI Sbjct: 1 MRPASKMTTAVCTSQWYCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNARAGQEGKVAASAKKNI 320
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|585107618|gb|EWM25755.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 377.867 bits (969), Expect = 4.914e-128 Identity = 177/289 (61.25%), Postives = 224/289 (77.51%), Query Frame = 0 Query: 12 CTSQWYCPPETLTATTRVYTARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF 300 CTS YCPP +L TR TY+F+QFWQL+PW E FY EK F+ P + FV N W+ +S+ +Y +M++ LP I KRP+K T LA WNL LA +S +GA+R+VPHLLWF++TH+FK+TVCT P +NGDGA+GLW LFTLSK+ EL+D++++CLKGR+PIFLHWYHHV+VL FTWAA+ A HPGMYFIAMNYTVH+VMY+YYFLMAIKAKPKWLNPIYITF+QI QM+ GVII+ +GF Y+ ++C V P VL +VIY SYLYLF++F++KRFF Sbjct: 12 CTSSLYCPPSSLVPVTRELAGH--TYTFLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKRPVK-CDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMNGDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRFF 297
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|585102147|gb|EWM21810.1| (fatty-acyl elongase [Nannochloropsis gaditana]) HSP 1 Score: 249.595 bits (636), Expect = 2.127e-77 Identity = 131/288 (45.49%), Postives = 189/288 (65.62%), Query Frame = 0 Query: 20 PETLTATTRVYTAR-NTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLK-----NLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYIN-GDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF 300 P L A++R TA + F+Q +Q PWLE FY +EKNF+ F+ + N + ++ +Y+S +I +++R + NL A WN FLA +S +GA RVVPH L+ + FK TVC AP GDGA G+WV LFT+SK+ EL+D++ + LKG+ P+FLHWYHHV+VL +TW ++ A +PG+YF+AMNY+VH++MY+YYFLM ++ PKW NP++IT QI QMLVGV I+ F++S D SCA+ ++ A +YA+YLY F+ F ++RFF Sbjct: 13 PRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSR-DPSCALVRGLIPWCAAMYATYLYFFVLFFLERFF 299
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|585110649|gb|EWM28304.1| (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 239.58 bits (610), Expect = 5.793e-74 Identity = 121/288 (42.01%), Postives = 176/288 (61.11%), Query Frame = 0 Query: 31 TARNTTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNARAGQEGKVAASAKK 318 +R +T F Q +Q+ P +E FY +EK ++ P++E++ WV + +Y+ I +MK R +L PLA WNL L+++S +G VRVVPHL++ +T C AP + G+ A G WV F LSK+AELID+ +I L+ + FLHWYHHV+VL FTW + +PG+ F+AMNY+VH++MY YYFLMA++ +P WL P +IT MQI+QM+VGV + F CAVD +L V+Y++YLYLF +F ++RF + + GK S K Sbjct: 35 NSRGST--FTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKAGVSKMK 320
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|553192576|ref|XP_005855601.1| (fatty-acyl [Nannochloropsis gaditana CCMP526] >gi|422293464|gb|EKU20764.1| fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 233.417 bits (594), Expect = 1.473e-71 Identity = 127/286 (44.41%), Postives = 169/286 (59.09%), Query Frame = 0 Query: 39 FIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISL-AIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHE-AAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDAS-CAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNA-RAGQEGKVAASAKKNI 320 F Q +Q YP L FY +EKNF+ F W + ++L IY MI+ +M+ RP T LACWNL L+V+S G +R VPHLL ++T FK T+C P G+GA GLWV LF SKV EL+D+++I + + FLHWYHH++VL F W ++ + G+YF+AMNY+VH+VMY YY+L AIKA P W+ P IT QI+QM+VGV I FYY D C V P + A++Y SYLYLF F ++RF R G+E + K I Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKI 316
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|585111978|gb|EWM29442.1| (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 233.802 bits (595), Expect = 5.774e-71 Identity = 127/286 (44.41%), Postives = 169/286 (59.09%), Query Frame = 0 Query: 39 FIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISL-AIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHE-AAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDAS-CAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNA-RAGQEGKVAASAKKNI 320 F Q +Q YP L FY +EKNF+ F W + ++L IY MI+ +M+ RP T LACWNL L+V+S G +R VPHLL ++T FK T+C P G+GA GLWV LF SKV EL+D+++I + + FLHWYHH++VL F W ++ + G+YF+AMNY+VH+VMY YY+L AIKA P W+ P IT QI+QM+VGV I FYY D C V P + A++Y SYLYLF F ++RF R G+E + K I Sbjct: 31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKI 316
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|585112414|gb|EWM29833.1| (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana]) HSP 1 Score: 226.483 bits (576), Expect = 1.021e-68 Identity = 124/283 (43.82%), Postives = 181/283 (63.96%), Query Frame = 0 Query: 15 QWYCPPETLTATTRVYTARNTT--YSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLK-----NLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATG-LWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLY 289 W+ P L T++ Y R+ F+Q +Q P LE FY +EK+F+ F + + WV +++ +Y+S ++ +++R + NL A WN FLA++S GA+RVVPH L+ + FK+TVC AP LWV LFT+SKV EL+D++ + LKG+ P+FLHWYHHV+VL +TW ++ A +PG+YFIAMNYTVH+VMY+YYFLM ++ PKWL+P++IT MQI+QMLVGV ++ + Y + D SCAV ++ A +YA+YLY Sbjct: 2 SWFLDPAPLYETSQ-YITRDPVKPVRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQA-DPSCAVVRDLIPWCAAMYATYLY 282
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|256750562|gb|ACV21066.1| (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 225.328 bits (573), Expect = 2.315e-68 Identity = 122/286 (42.66%), Postives = 168/286 (58.74%), Query Frame = 0 Query: 39 FIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISL-AIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHE-AAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDAS-CAVDPFVLKVSAVIYASYLYLFMQFMIKRFFVKNA-RAGQEGKVAASAKKNI 320 F Q +Q YP L+ Y +EKNF +F W V+ ++L +Y MII +M RP T LACWNL L+++S G +R VPHLL ++T FK T+C P G+GA G+WV LF SKV EL+D+++I + + FLHWYHH++VL F W ++ + G+YF+AMNY+VH++MY YY+L AI A PKW+ P IT QI+QM+VGV I FY+ D C V + A++Y SYLYLF F ++RF R G+E + K I Sbjct: 33 FTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKI 318
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|1210521613|dbj|GAX19603.1| (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 221.476 bits (563), Expect = 2.519e-67 Identity = 114/261 (43.68%), Postives = 160/261 (61.30%), Query Frame = 0 Query: 41 QFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHP-GMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF 300 +F LYP +E+ Y FEK ++P+P+ ++ G + + IY I + KR N LA WNLFL+V+S +G +R PHL ++ +F+ +C P G G+TGLWV LF LSK ELID+ +I + + IFLHWYHH++VL + W ++ P G+ F AMNYTVH+ MY YYFLMA++ KPKW NP+ IT MQI+QM+VGV + +YY DA CA+D + ++Y SYL+LF QF R+F Sbjct: 18 EFSCLYPQVEHLYTSFEKFYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSRYF 278
BLAST of EWM25754.1 vs. NCBI_GenBank
Match: gi|224008873|ref|XP_002293395.1| (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >gi|220970795|gb|EED89131.1| long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 211.075 bits (536), Expect = 4.206e-63 Identity = 105/266 (39.47%), Postives = 166/266 (62.41%), Query Frame = 0 Query: 39 FIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMSMIIFLPMIMKKRPLKNLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYINGDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHP-GMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSS---MDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF 300 + +F L+P L Y PFE+ ++P+ ++ + I+ Y+ +I+ MK RP + LA WNL L+++S IGA+R P L + ++T++ + +C P + G G+TGLWV LF LSK EL+D+ +I + + IFLHWYHH++VL + W ++ P G++F+ MNY+VH+VMY YYFLMA+K +PKW NP+++TFMQ++QM +GV ++ FYY S + +C + + V+Y SY YLF QF + R++ Sbjct: 22 YAEFSCLHPLLGATYLPFERFYDPVATLTWMQDRPMIPIIACVAYVVLIVLGRAYMKDRPAWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDPAALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYYYSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARYY 287 The following BLAST results are available for this feature:
BLAST of EWM25754.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|