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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100162g2.1247.mrna |
| Orig protein id | gnl|cribi|Naga_100162g2.1247 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:689880..692233 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4928 ID=rna4928|Name=rna4928|organism=Nannochloropsis gaditana|type=mRNA|length=1965bp
CTGCGACAACTTCATTTATGCCTTGTGCTCAAACTAGTAGGTACCCATGT
CCGCACAGTACGTGGCGGTGGCGGACTGAAAACGTCGTTAAGTAAGCGGA
GATACCAGATCGATCCGCTACTCGACGAAGTGGTCCGATATTCCATGTAC
GCTTCACGCATGTCTGAGAAAGATCAAGAAAAGACTCATTTTACATATGA
AGGACTGCATGGTCTGGTCGCGCTTCCAATGCGATGACCAAACATGTCGA
ATCTCCACAGAATATTTGGGGGATCGCGTCGCCCATGCGTTTCTGGCCGT
GACGTGCGAGCCTCTGGGGCAGTACCCAAGCTTACGAACGACTGATGAAT
TTGATTGACAAATCTAAAAAGGCACACACTGAATATTTTTTACCTCCATA
TTGATGATTCAACACCTAATACCGAAGCCTCAGCCTTGCTGCGCGCCGCG
GCGTGAAGAGAGGGTCAGGAAGTCGCCAGTTTGGAAGGACCGAGCCACCC
TTGGACCCCGCAATCAGGGCCATGAAGCGTGTGGCCTCCGTCAATACAAT
CAACCGCCTGACTAAGGTCCAGGAAGGAGAGCACGACACTGTGGATTACC
GCGTCCATTCCCTTGATCACAACCAGGAGCGTATTTCGCTTTGGCATGAG
CTGCCACTGTTTGCAGTCGACGACGACGCCAAGCCCACAGGCGCTCTCAA
CTTTATTTGCGAGATCCCCAAATTTACCCGCCGCAAGTTCGAAATTTGCA
CGACGGAGGCCGGCAATCCCATCAAGCAAGACCAGAAGAACGGAAAACCC
CGAGTGTTCTCAAAGGGGGATATTTTTTTTAACTATGGTTGCTTCCCTCG
CACCTGGGAGGATCCGCAGCATGTTCCCGAAGACGTAGGGGTGGGTGGGG
ACAACGATCCCTTGGACGTCTGCGAGATTGGGCTCCGGCAGATCCCGACG
GGGGCGGTGAGGCAGGTCAAGGTCCTGGGCGTCCTCTGCCTCATCGACGA
CGGCGAGGCGGATTGGAAGGTGATCGCCATCGACGAGGAGGACCGGTGGG
CACGGGAATTGAACGACGTGCAGGACGTGGAGAGGCTGCTCCCGGGCACC
TTGGACGCAGTGCGGGAGTGGTTCCGGACCTATAAAATCCCCGATGGAAA
GCCCGAAAACAGGTTCGCACTGGGCGAGGAGTTTATGGGCGTCAAGTACA
CGATGCGCGTGATTCGAGAGACGCACGAGGCTTGGAAACGCCTGGTCAAG
TCCTCGGGCGGGTGGCGGGGGGACCTGAGCAGGGAGGCGTCCTCCCAGTC
CCTTCACAGGAACCTCTCCGTCCCGTCCCTGGAGGAGCTGGACATCGACT
CGGACCACCAGGCCGTCTGCGCCCTGCTGGGGGAGGAGGCCGCGTCCAAG
GCCTGCGGGTCGCTGGGAGGGCCCCCCCCCCCTGGCTTGCGTGGAGGTGA
AGATGTCGGCCGCGGGCGGGATGGGCCTGGGCCTGAAGGAGGGGGTGAAA
GAGGGCGTGGCAGTGGCGGGGAAGGAGGCTGTCCCTAACTTGGTGGCTGT
GGACGGGGCGCTGGAGTTTTAGTGAAGGGGGACAAGCGAGGGGGCGGGGT
GCCACCGGAGGTGGGGTTCGATGCGGAGGGGGCCCGCGTTCAGGAGCCAC
GGAAATTGTGGGAGGGGCGGGGCGGAGGTATAGAGAGCGAGCACCGAGCG
TTTCGTGTCTTTCATGGGAGCGATGGGGAGGGAAGAAGGTAAACCTCGCC
GTTGGTCAGAGGATACGGAGGAGGGCGGACGGGCTCCCTCTAGACTCCGG
AGGAAAGAGCCAAAGGGCCGACTGGACCGTCGGGGGGCGGGTCATCGGTC
TCGGCGTGGGAGGTCGCATCTTGAGCGCGCGAGGGCGGGCGCGCGGGTGG
GAAAAAAGCAAGGGGTGTATGACTGGGTGTGTGCAATTAGAAGCAATCAC
AACATGACACATTTC back to topprotein sequence of rna4928 >rna4928-protein ID=rna4928-protein|Name=rna4928|organism=Nannochloropsis gaditana|type=polypeptide|length=433bp
MTCSSTRYFPGRGNHALPRGPAQGRHATPVGTGKKTSLRSLLVVKNIMLV
ACSFSPPQDGRLAMLSASSFLPPPLPRVGTSRPDQLLVTRTRSSTRISSS
FHNSFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVE
VNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFS
DRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQ
REEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAA
CFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGEAG
VYARRDGVVCGEMAYHTAALLNEAGRLICVCEFSLRVNASKVFVPAVVAY
FGMSVLHPLIMFPFLIFTSTKRPQQGPPSRRCS back to topmRNA from alignment at CM002464.1:689880..692233- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4928 ID=rna4928|Name=rna4928|organism=Nannochloropsis gaditana|type=mRNA|length=2354bp|location=Sequence derived from alignment at CM002464.1:689880..692233- (Nannochloropsis gaditana)
CGTTCGGATAAAAATGAAGAGTGGGACATCCGGGCACAAGAACGCGTCTG
AATCAACCCCGTTGTACTACTTCTCTGCGGACAGGGGGAAATTAATGAGA
ATGCGAGCCGTTGCGGAGGCATGACTTGCAGCTCAACGCGCTATTTTCCT
GGCAGAGGAAACCACGCTCTACCCCGAGGGCCTGCTCAGGGACGTCATGC
TACGCCGGTAGGAACCGGGAAAAAAACTTCTCTGCGATCACTCTTGGTCG
TCAAGAATATCATGCTCGTGGCATGTTCTTTTTCACCTCCTCAAGATGGC
AGACTTGCCATGTTATCGGCGTCATCTTTTCTACCTCCCCCCCTCCCACG
CGTCGGTACGAGCCGGCCCGACCAATTACTTGTCACGCGAACCAGGTCAT
CGACAAGAATTTCCAGCTCTTTTCACAACAGCTTTCGTACGATCGTCCCT
ATCACTCCTCGCCCCGATGCTTGCCGCATCCACCCCGCTGATCAAGTATT
TTTCATCGGTTCCTGCTTTTCGGACACCATGGGCAACACACTCAAAGAGA
AGCTGAAAATGAAAGTGGAGGTTAATCCGTTCGGCACTTCGTATAACCCC
GTTTCAATCGCACGTTGCCTGCATCGCCTCGCAACAGGCCGTCTCTTCGA
CCAAGAGGAGCTCCTGAGGCATCCGCAGGACGGACGATGGATCAGGTGAG
AGAGCGATATCAACGTCATCGCTTGGCGCGCATGCGCATTCAATCATCAA
GTTACCTTTGACTGTAAGACATCATGAAAGAGAATTTTAAGGCAGCCGAG
ATTTTCAGGTGTTTGACCTCTTCTCCCTACCACAGCCTCGAGCACCACTC
AGGCTTCAGCGATCGGGACCGCTCGAATGCCCTGGCAGGTATCAATGCAC
GTTTAATGGCGGGCCGCGCGTTCTTACGCGGGGCGCAACACGTCTTTGTG
ACTCTTGGAACGGCTCATGCGTATGTTTACTTCAAAAAAACGGATGAACT
GGATAAACAGAGAGAAGAAGGGGAGGGATGCAACGGGGAAGAGAGCAAAG
CAGACGGGGCTGAGGGAATAGAGGGGCGTGAGGAAAAGCAGCAACTGAGG
GCAAGAGGAGCGAACGATGGTGGACAAATTGTCGCCAATTGCCATCGGCT
TCCCGCTGCATGCTTTCGGCGCGAGCTGTTAGGTGGGTGAGACCATGGGC
GTGAAATCCACTTTGCTGCACCCTTATATGCCTAGGTCGTCTACTCCCCG
GAATTTTACCCTCCAACCTTGTGCCGTCAGACCCTCCTCGCATAGTCCAG
GCACTCCATCAAACTGTGGAGTCGATTAGGTGTCTGAATACTCATTGCAC
TATCAGCTTCACCGTCTCTCCGGTTCGCCACATCCGAAACGCCGGCGGTG
AGGCAGGTGTGTATGCTCGGAGGGACGGCGTGGTGTGCGGTGAGATGGCT
TATCACACAGCTGCGCTTTTAAACGAAGCGGGCCGATTGATATGTGTGTG
TGAATTTTCGTTACGTGTCAATGCATCGAAAGTGTTCGTCCCCGCTGTCG
TCGCGTATTTTGGGATGAGTGTTCTTCATCCACTCATCATGTTTCCCTTT
CTCATTTTTACAAGTACAAAGCGCCCGCAGCAAGGCCCACCTTCTCGCCG
CTGTTCATGAATTCTTGGACAAAGAAAAGACGTCTTCATCCCCGAGCTCT
ACCTCGTCATTAAAAGCCCCTCTTTTGTCCTATTTCCCTGCGTACGAGAT
CATGATGGATGACCTCCGAGATTACCGCTTCTATGCCACGGATATGCTCC
ATCCTTCTCCCCTCGCACTCGACTACATTTATACTCGCTTTGTCGACACG
TATTTCGACAACTCTTCGTCATCAGTCCGATTCAAAAAAGAGATGGAAGG
CTTGCAGCGTAATCTCTTGCATCGACCCCTTGACGAGGCAAGCTCCGCCC
ATCAAACATTTTTGAAGAAGCAGCTGAAGGAAATGAAAAAAATGCAGGCG
GAGTGGCCACACTTAGACTTTACTGATGAGCGCCTACTCATTGAGAAGAA
ACTTTACTCGTTGTAAATTCGACATTTAAAGTTATGTGCATCTGCCAGAA
TTGTTTATGCGGCATATTACGCAACCTCTCGTTTGAAGGAATTCTCGGTC
AAGCACGAAGATGCAAGGAAAGTAGCTCTAAGCACAAAATAACTCATTAA
TTACTGTGTTCGTGGTATCGTTCATCCATCGCGACGTTCAAGCAAGCCTG
ATCCCGTTCGTTCGAGTCGGCGTCCGTTTCCAACCTCCTACTTCCCGATT
TAAACCGTACCGCCGGGCATTTGAGCGGTCACGCTGGTATTAAACAGGAC
CCTG back to topCoding sequence (CDS) from alignment at CM002464.1:689880..692233- >rna4928 ID=rna4928|Name=rna4928|organism=Nannochloropsis gaditana|type=CDS|length=3906bp|location=Sequence derived from alignment at CM002464.1:689880..692233- (Nannochloropsis gaditana)
ACCCTCCTCGCATAGTCCAGGCACTCCATCAAACTGTGGAGTCGATTAGG
TGTCTGAATACTCATTGCACTATCAGCTTCACCGTCTCTCCGGTTCGCCA
CATCCGAAACGCCGGCGGTGAGGCAGGTGTGTATGCTCGGAGGGACGGCG
TGGTGTGCGGTGAGATGGCTTATCACACAGCTGCGCTTTTAAACGAAGCG
GGCCGATTGATATGTGTGTGTGAATTTTCGTTACGTGTCAATGCATCGAA
AGTGTTCGTCCCCGCTGTCGTCGCGTATTTTGGGATGAGTGTTCTTCATC
CACTCATCATGTTTCCCTTTCTCATTTTTACAAGTACAAAGCGCCCGCAG
CAAGGCCCACCTTCTCGCCGCTGTTCATGACCTCGAGCACCACTCAGGCT
TCAGCGATCGGGACCGCTCGAATGCCCTGGCAGGTATCAATGCACGTTTA
ATGGCGGGCCGCGCGTTCTTACGCGGGGCGCAACACGTCTTTGTGACTCT
TGGAACGGCTCATGCGTATGTTTACTTCAAAAAAACGGATGAACTGGATA
AACAGAGAGAAGAAGGGGAGGGATGCAACGGGGAAGAGAGCAAAGCAGAC
GGGGCTGAGGGAATAGAGGGGCGTGAGGAAAAGCAGCAACTGAGGGCAAG
AGGAGCGAACGATGGTGGACAAATTGTCGCCAATTGCCATCGGCTTCCCG
CTGCATGCTTTCGGCGCGAGCTGTTAGATGACTTGCAGCTCAACGCGCTA
TTTTCCTGGCAGAGGAAACCACGCTCTACCCCGAGGGCCTGCTCAGGGAC
GTCATGCTACGCCGGTAGGAACCGGGAAAAAAACTTCTCTGCGATCACTC
TTGGTCGTCAAGAATATCATGCTCGTGGCATGTTCTTTTTCACCTCCTCA
AGATGGCAGACTTGCCATGTTATCGGCGTCATCTTTTCTACCTCCCCCCC
TCCCACGCGTCGGTACGAGCCGGCCCGACCAATTACTTGTCACGCGAACC
AGGTCATCGACAAGAATTTCCAGCTCTTTTCACAACAGCTTTCGTACGAT
CGTCCCTATCACTCCTCGCCCCGATGCTTGCCGCATCCACCCCGCTGATC
AAGTATTTTTCATCGGTTCCTGCTTTTCGGACACCATGGGCAACACACTC
AAAGAGAAGCTGAAAATGAAAGTGGAGGTTAATCCGTTCGGCACTTCGTA
TAACCCCGTTTCAATCGCACGTTGCCTGCATCGCCTCGCAACAGGCCGTC
TCTTCGACCAAGAGGAGCTCCTGAGGCATCCGCAGGACGGACGATGGATC
AGACCCTCCTCGCATAGTCCAGGCACTCCATCAAACTGTGGAGTCGATTA
GGTGTCTGAATACTCATTGCACTATCAGCTTCACCGTCTCTCCGGTTCGC
CACATCCGAAACGCCGGCGGTGAGGCAGGTGTGTATGCTCGGAGGGACGG
CGTGGTGTGCGGTGAGATGGCTTATCACACAGCTGCGCTTTTAAACGAAG
CGGGCCGATTGATATGTGTGTGTGAATTTTCGTTACGTGTCAATGCATCG
AAAGTGTTCGTCCCCGCTGTCGTCGCGTATTTTGGGATGAGTGTTCTTCA
TCCACTCATCATGTTTCCCTTTCTCATTTTTACAAGTACAAAGCGCCCGC
AGCAAGGCCCACCTTCTCGCCGCTGTTCATGACCTCGAGCACCACTCAGG
CTTCAGCGATCGGGACCGCTCGAATGCCCTGGCAGGTATCAATGCACGTT
TAATGGCGGGCCGCGCGTTCTTACGCGGGGCGCAACACGTCTTTGTGACT
CTTGGAACGGCTCATGCGTATGTTTACTTCAAAAAAACGGATGAACTGGA
TAAACAGAGAGAAGAAGGGGAGGGATGCAACGGGGAAGAGAGCAAAGCAG
ACGGGGCTGAGGGAATAGAGGGGCGTGAGGAAAAGCAGCAACTGAGGGCA
AGAGGAGCGAACGATGGTGGACAAATTGTCGCCAATTGCCATCGGCTTCC
CGCTGCATGCTTTCGGCGCGAGCTGTTAGATGACTTGCAGCTCAACGCGC
TATTTTCCTGGCAGAGGAAACCACGCTCTACCCCGAGGGCCTGCTCAGGG
ACGTCATGCTACGCCGGTAGGAACCGGGAAAAAAACTTCTCTGCGATCAC
TCTTGGTCGTCAAGAATATCATGCTCGTGGCATGTTCTTTTTCACCTCCT
CAAGATGGCAGACTTGCCATGTTATCGGCGTCATCTTTTCTACCTCCCCC
CCTCCCACGCGTCGGTACGAGCCGGCCCGACCAATTACTTGTCACGCGAA
CCAGGTCATCGACAAGAATTTCCAGCTCTTTTCACAACAGCTTTCGTACG
ATCGTCCCTATCACTCCTCGCCCCGATGCTTGCCGCATCCACCCCGCTGA
TCAAGTATTTTTCATCGGTTCCTGCTTTTCGGACACCATGGGCAACACAC
TCAAAGAGAAGCTGAAAATGAAAGTGGAGGTTAATCCGTTCGGCACTTCG
TATAACCCCGTTTCAATCGCACGTTGCCTGCATCGCCTCGCAACAGGCCG
TCTCTTCGACCAAGAGGAGCTCCTGAGGCATCCGCAGGACGGACGATGGA
TCAGACCCTCCTCGCATAGTCCAGGCACTCCATCAAACTGTGGAGTCGAT
TAGGTGTCTGAATACTCATTGCACTATCAGCTTCACCGTCTCTCCGGTTC
GCCACATCCGAAACGCCGGCGGTGAGGCAGGTGTGTATGCTCGGAGGGAC
GGCGTGGTGTGCGGTGAGATGGCTTATCACACAGCTGCGCTTTTAAACGA
AGCGGGCCGATTGATATGTGTGTGTGAATTTTCGTTACGTGTCAATGCAT
CGAAAGTGTTCGTCCCCGCTGTCGTCGCGTATTTTGGGATGAGTGTTCTT
CATCCACTCATCATGTTTCCCTTTCTCATTTTTACAAGTACAAAGCGCCC
GCAGCAAGGCCCACCTTCTCGCCGCTGTTCATGACCTCGAGCACCACTCA
GGCTTCAGCGATCGGGACCGCTCGAATGCCCTGGCAGGTATCAATGCACG
TTTAATGGCGGGCCGCGCGTTCTTACGCGGGGCGCAACACGTCTTTGTGA
CTCTTGGAACGGCTCATGCGTATGTTTACTTCAAAAAAACGGATGAACTG
GATAAACAGAGAGAAGAAGGGGAGGGATGCAACGGGGAAGAGAGCAAAGC
AGACGGGGCTGAGGGAATAGAGGGGCGTGAGGAAAAGCAGCAACTGAGGG
CAAGAGGAGCGAACGATGGTGGACAAATTGTCGCCAATTGCCATCGGCTT
CCCGCTGCATGCTTTCGGCGCGAGCTGTTAGATGACTTGCAGCTCAACGC
GCTATTTTCCTGGCAGAGGAAACCACGCTCTACCCCGAGGGCCTGCTCAG
GGACGTCATGCTACGCCGGTAGGAACCGGGAAAAAAACTTCTCTGCGATC
ACTCTTGGTCGTCAAGAATATCATGCTCGTGGCATGTTCTTTTTCACCTC
CTCAAGATGGCAGACTTGCCATGTTATCGGCGTCATCTTTTCTACCTCCC
CCCCTCCCACGCGTCGGTACGAGCCGGCCCGACCAATTACTTGTCACGCG
AACCAGGTCATCGACAAGAATTTCCAGCTCTTTTCACAACAGCTTTCGTA
CGATCGTCCCTATCACTCCTCGCCCCGATGCTTGCCGCATCCACCCCGCT
GATCAAGTATTTTTCATCGGTTCCTGCTTTTCGGACACCATGGGCAACAC
ACTCAAAGAGAAGCTGAAAATGAAAGTGGAGGTTAATCCGTTCGGCACTT
CGTATAACCCCGTTTCAATCGCACGTTGCCTGCATCGCCTCGCAACAGGC
CGTCTCTTCGACCAAGAGGAGCTCCTGAGGCATCCGCAGGACGGACGATG
GATCAG back to top
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