EWM25748.1, cds4916 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|585107611|gb|EWM25748.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 893.264 bits (2307), Expect = 0.000e+0 Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 0
Query: 1 MTCSSTRYFPGRGNHALPRGPAQGRHATPVGTGKKTSLRSLLVVKNIMLVACSFSPPQDGRLAMLSASSFLPPPLPRVGTSRPDQLLVTRTRSSTRISSSFHNSFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGEAGVYARRDGVVCGEMAYHTAALLNEAGRLICVCEFSLRVNASKVFVPAVVAYFGMSVLHPLIMFPFLIFTSTKRPQQGPPSRRCS 433
MTCSSTRYFPGRGNHALPRGPAQGRHATPVGTGKKTSLRSLLVVKNIMLVACSFSPPQDGRLAMLSASSFLPPPLPRVGTSRPDQLLVTRTRSSTRISSSFHNSFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGEAGVYARRDGVVCGEMAYHTAALLNEAGRLICVCEFSLRVNASKVFVPAVVAYFGMSVLHPLIMFPFLIFTSTKRPQQGPPSRRCS
Sbjct: 1 MTCSSTRYFPGRGNHALPRGPAQGRHATPVGTGKKTSLRSLLVVKNIMLVACSFSPPQDGRLAMLSASSFLPPPLPRVGTSRPDQLLVTRTRSSTRISSSFHNSFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGEAGVYARRDGVVCGEMAYHTAALLNEAGRLICVCEFSLRVNASKVFVPAVVAYFGMSVLHPLIMFPFLIFTSTKRPQQGPPSRRCS 433
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|1052972562|emb|SCH92586.1| (GSCFA family [uncultured Bacteroides sp.]) HSP 1 Score: 134.035 bits (336), Expect = 4.413e-32 Identity = 79/241 (32.78%), Postives = 112/241 (46.47%), Query Frame = 0
Query: 104 SFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRN 344
FRT V + + IH ADQ+ GSCFS+ +GN L E K +VNPFG YNP+SIA + RL G + +++L H + G+W SL HHS FS D + L IN R+M+G L A + T G++ Y + + G+IV NCH+LPA F R ++ I A ++ +R L H FTVSP+RH+++
Sbjct: 2 EFRTKVELPLK--GPEIHHADQLMMWGSCFSEHIGNLLSEN-KFTCDVNPFGVLYNPISIASSIQRLLDGLPYQKQDL--HQEQGQWYSLMHHSSFSSADVTECLDKINQRIMSGHEHLLHADWLIFTWGSSFVYTW--------------------------------------------KEDGKIVGNCHKLPARLFERHMISADEIATAYLPLLQQLRSLRPHLQCLFTVSPIRHLKD 193
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|524634831|emb|CDD50914.1| (putative uncharacterized protein [Bacteroides sp. CAG:875]) HSP 1 Score: 129.413 bits (324), Expect = 2.477e-30 Identity = 78/241 (32.37%), Postives = 111/241 (46.06%), Query Frame = 0
Query: 104 SFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRN 344
FRT V + + IH ADQ+ GSCFS+ +GN L E K +VNP G YNP+SIA + RL G + +++L H + G+W SL HHS FS D + L IN R++AG L A + T G++ Y + + G+IV NCH+LPA F R ++ I A ++ +R L H FTVSP+RH+++
Sbjct: 2 EFRTKVELPLK--GPEIHHADQLMMWGSCFSEHIGNLLSEN-KFTCDVNPSGVLYNPISIASSIQRLLDGLPYQEQDL--HQEQGQWYSLMHHSSFSSADVTECLDKINQRIIAGHEHLLHADWLIFTWGSSFVYTW--------------------------------------------KEDGRIVGNCHKLPARLFERHMVSADEIATAYLPLLQQLRSLRPHLQCLFTVSPIRHLKD 193
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|1176496709|ref|WP_082326467.1| (hypothetical protein [Sunxiuqinia dokdonensis] >gi|918919496|gb|KOH44501.1| hypothetical protein NC99_27310 [Sunxiuqinia dokdonensis]) HSP 1 Score: 129.028 bits (323), Expect = 3.603e-30 Identity = 77/246 (31.30%), Postives = 121/246 (49.19%), Query Frame = 0
Query: 103 NSFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGE 348
N + T V I + +I ++ +GSCF++ +G + ++LK +V+VNPFG YNP SI++ L L G+ + + +L H DG W S +HHS FS ++ L GIN +L+ A L+ ++ + ++LGTA + K+T GQIV+NCH+LPAA F+R L P IV+ + + ++ N I FTVSP+RH ++ E
Sbjct: 2 NQYYTEVNI--KDLGWKIDYHSKLMLLGSCFAENIGQRM-QRLKFQVDVNPFGILYNPQSISKSLRLLVEGKAYSEADLFEH--DGVWHSFDHHSRFSSTNQQQVLDGINEQLILSAAHLKESEFLMLSLGTAWIFE-LKRT-------------------------------------------GQIVSNCHKLPAAEFKRLRLTPGEIVEDYRELILALWRFNPKLKILFTVSPIRHWKDGAVE 198
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|1082475416|gb|OFY20413.1| (hypothetical protein A2W98_10935 [Bacteroidetes bacterium GWF2_33_38] >gi|1082541833|gb|OFY76586.1| hypothetical protein A2265_11120 [Bacteroidetes bacterium RIFOXYA12_FULL_33_9] >gi|1082556336|gb|OFY90100.1| hypothetical protein A2236_01420 [Bacteroidetes bacterium RIFOXYA2_FULL_33_7]) HSP 1 Score: 128.257 bits (321), Expect = 5.643e-30 Identity = 77/249 (30.92%), Postives = 115/249 (46.18%), Query Frame = 0
Query: 103 NSFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGEAGV 351
NSFRTIV TP+ H ++ + +GSCF++ +G+ L +KL KVE+NPFG YNP+SI L L + F +L + + RW + HHS FS+ + + L IN + AG L+ A + +T GTA Y + G IV+NCH+ PA+ F ELL I+ Q + S++ N + I FT+SP+RH ++ E +
Sbjct: 2 NSFRTIVE-TPKYKINISHDSN-ILMLGSCFTENIGSNL-QKLLFKVEINPFGIIYNPISIKNSLEILIENQKFTNSDLKFYNE--RWFTYFHHSRFSNANAEDCLLNINQAINAGNEVLKKADILLITFGTARVYRLI--------------------------------------------ESGNIVSNCHKQPASLFSNELLRVENIISEYSQLIVSLKKFNPNINIIFTISPIRHWKDGAHENQI 201
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|1082405537|gb|OFX61020.1| (hypothetical protein A2066_20175 [Bacteroidetes bacterium GWB2_41_8]) HSP 1 Score: 128.642 bits (322), Expect = 6.161e-30 Identity = 81/249 (32.53%), Postives = 118/249 (47.39%), Query Frame = 0
Query: 104 SFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQD-GRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGEAGV 351
SF T + I P ++ + + F+GSCFS+ +G L++ LK V++NPFG YNPVSIA L L R+F + +L QD G W S HHS FSD DR AL +N R+ FL+ A + +T GT+ Y EL K GQ+V+NCH++ ++ F+R L I +A + +E + N + + FTVSP+RH ++ E V
Sbjct: 2 SFFTEIKIPEFP--WKMDYSKSMMFMGSCFSENIGLKLQD-LKFNVDMNPFGIIYNPVSIANSLKILLEKRIFTEVDLF---QDHGLWNSFSHHSRFSDTDREAALEKMNTRIELSSDFLQKADFLIITFGTSWVY-------ELKK-------------------------------------SGQVVSNCHKVLSSEFKRFRLGVYEITEAYRELLEQLWIFNPNLKVVFTVSPIRHWKDGAVENQV 200
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|524740506|emb|CDE39737.1| (putative uncharacterized protein [Prevotella sp. CAG:279]) HSP 1 Score: 127.487 bits (319), Expect = 1.037e-29 Identity = 79/228 (34.65%), Postives = 109/228 (47.81%), Query Frame = 0
Query: 119 RIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAG 346
+I + V +GSCF++ +GN LK + + + +NPFGT YNP SIA+ L RL F +EL+ + W S+ HHS FS D+ AL INA G A LR A+H+ VT GTA+ + S AD G+ VANCH++PA+ F R +L I ++ IR N H I+FTVSPVRH+ +
Sbjct: 15 KIEHDEAVMMLGSCFAEDVGNLLKRSM-LALCINPFGTLYNPRSIAQSLRRLMADLPFSADELVAYG--NLWHSMSHHSRFSSVDKDRALQKINAAYAEGVACLRSARHLIVTFGTAYTF-----------------------STAD----------------------GETVANCHKMPASMFNRRMLSTNEIADEWIPLIDDIRKFNPHIDITFTVSPVRHLADGA 194
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|1120298415|ref|WP_073164089.1| (hypothetical protein [Tangfeifania diversioriginum] >gi|1110274078|emb|SHI34301.1| GSCFA family protein [Tangfeifania diversioriginum]) HSP 1 Score: 126.716 bits (317), Expect = 2.393e-29 Identity = 74/221 (33.48%), Postives = 102/221 (46.15%), Query Frame = 0
Query: 128 FIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGE 348
F+GSCF++ +G + LK V++NPFG YNP+S+A L L + F E+L +H +G W S HHS FS D + AL IN R+ +L A+ +FVT GTA Y Y + GQ V+NCH++PAA F+R L I Q + SIR +N FTVSP+RH ++ E
Sbjct: 26 FMGSCFTENIGGKMA-ALKYDVDINPFGILYNPLSVANALELLLQKKKFTHEDLFQH--NGLWHSFYHHSRFSSSDANVALENINTRIETSAEYLEKAEFLFVTFGTAWVYEYIQ--------------------------------------------TGQTVSNCHKIPAAKFKRFRLAADTITQQFIPLINSIRKINPGIKFIFTVSPIRHWKDGAVE 199
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|1082380238|gb|OFX38325.1| (hypothetical protein A2X03_00845 [Bacteroidetes bacterium GWA2_40_15] >gi|1082439358|gb|OFX85168.1| hypothetical protein A2X06_12260 [Bacteroidetes bacterium GWC2_40_22] >gi|1082451175|gb|OFX96714.1| hypothetical protein A2X05_17410 [Bacteroidetes bacterium GWE2_41_25] >gi|1082523132|gb|OFY60868.1| hypothetical protein A2X04_01940 [Bacteroidetes bacterium GWF2_41_9]) HSP 1 Score: 125.561 bits (314), Expect = 6.176e-29 Identity = 75/243 (30.86%), Postives = 114/243 (46.91%), Query Frame = 0
Query: 104 SFRTIVPITPRPDACRIHPADQVFFIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAG 346
+FRT + + P P ++ +D V F GSCF+ ++G + + KM +NP GT YNPVS+ L L +G++F ++L + +G W+S HH+ FS D + + IN R + R FL ++ F+T GTA + + KKT G IV+NCH++PAA F ELL IV ++ + N + FTVSPVRH ++
Sbjct: 5 NFRTNINVGPSP--WKVSYSDNVMFAGSCFAASIGEQMLMR-KMPAMINPAGTVYNPVSVLNTLENLISGKIFTLDDLYNY--EGTWLSFFHHTDFSSEDHDSLIDKINDRSVKAREFLSNSRFFFITFGTARVFRW-KKT-------------------------------------------GTIVSNCHKIPAAQFETELLAVNDIVDRWVSLLDRLPEFNPDLKVVFTVSPVRHWKDGA 198
BLAST of EWM25748.1 vs. NCBI_GenBank
Match: gi|1120130278|ref|WP_073000550.1| (hypothetical protein [Mariniphaga anaerophila] >gi|1110303162|emb|SHF07280.1| GSCFA family protein [Mariniphaga anaerophila]) HSP 1 Score: 125.176 bits (313), Expect = 9.106e-29 Identity = 73/221 (33.03%), Postives = 102/221 (46.15%), Query Frame = 0
Query: 128 FIGSCFSDTMGNTLKEKLKMKVEVNPFGTSYNPVSIARCLHRLATGRLFDQEELLRHPQDGRWISLEHHSGFSDRDRSNALAGINARLMAGRAFLRGAQHVFVTLGTAHAYVYFKKTDELDKQREEGEGCNGEESKADGAEGIEGREEKQQLRARGANDGGQIVANCHRLPAACFRRELLDPPRIVQALHQTVESIRCLNTHCTISFTVSPVRHIRNAGGE 348
F+GSCF++ +GN + LK V++NPFG YNPVS+A L L + F + +L+++ +G W S HHS FS D L IN R+ + FL+ A +F+T GTA Y Y N GQ V+NCH++P FRR L P I + Q IR +N + FTVSP+RH ++ E
Sbjct: 24 FMGSCFTENVGNKMA-GLKYPVDINPFGILYNPVSVANGLRFLLEKKKFAKNDLIQN--NGLWHSFFHHSRFSSPDAEETLDAINNRIESSAEFLKNAGFLFLTFGTAWVYAY--------------------------------------------NKTGQTVSNCHKIPEKEFRRFRLTPDEITENYKQLFSEIRQINPEIKLIFTVSPIRHWKDGAIE 197 The following BLAST results are available for this feature:
BLAST of EWM25748.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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