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Properties
| Property Name | Value |
|---|
| Product | adp-ribosylation factor gtpase-activating protein agd8 |
| Orig transcript id | gnl|cribi|Naga_100176g3.1057.mrna |
| Orig protein id | gnl|cribi|Naga_100176g3.1057 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:644487..646983 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4910 ID=rna4910|Name=rna4910|organism=Nannochloropsis gaditana|type=mRNA|length=2908bp
TCGTACCGCTGGGGTAGATGCTTGGAGGCTTGTGCTCGGCGTGAATGTTT
GCAACTCCCTGGAATGGCGTGCAACATGCAAGGAGAGCCGCCCGTGCCGT
CCTCCTCCCAGGTGAAGGGTTACAACCCTCAAATACTTTTACTTGCGTTT
TAACCTCTTTTTGATAACATATTTCACAAGAAAGAGCCACGGCTTGCTTG
TTGGCTCCTGGCAGCAAGATAGGGGGCAAAAGAGGTGGAGTGCGGCCCCC
TTATTTTATCTCACGACCATCACGACGATGCAGCTCGCCATTCCAAGAGG
GACCGTCAACTGAGTAAACAAAATTGAACTTAAGTTAGAACAAACGATCA
ATTGGTGGCCAAAAGACTGCCGATTCTTTTGAGGACAAACTATGTACAGC
CTTTTGCCATTCCTTGTGTACTGGCTCGCAGTCCAGGAAGGACTGCGGGT
TGGAGGTCCAGGGGGTCCGGAGGGTCTCCGCTTGAGCAGCGGGAGCAGAG
ACGCCTTCCTGCGGGACGGTTTCCCGTCGCAGCACCAACTGGGCGGTTTT
GATGCGGATGCCATGGCTATTACTCCTGCCGTCTTTGACTCGCAAATAGA
GGAATGCATTCCTCAGATCGCTACGTTGCTCGCCTGTACCAAGGTGGACG
GGCCCCCTGACGCGATGCGGCGGAATCGCTGGATCGAGCAGCAAGTAATA
GAGAAATGCACGTCCAATGTTCACTTAGGTCTCAAGCTTTTCTGGCTATT
GCGCGCGGCCTTGGGGCACTTGGAGATTCCCACGCGTCGTGGCCTCCCGC
AGATCACAGGAGAGAGGCAGCGCGCTCACCTGATGAGCCTGCTCAACACG
GGTGAGATCCTGGCAAGGGAGGGGCAGCAATCCCCTGGCTGTCTGAGACC
CTTACGTGCACGATACTTTGCGCATTGCACCACTTTCGTGGCGGCCTTGG
TAAAGCTGTCCTTCGACGTGAAGGGAGTCTCGTCCGTGCGCCGGCTAACT
GCCCTGCATCAGGGCATCGACCGCGTGAATGCCCTTCTCTTTCGCCTGAT
GCACACCCGGGGGGAGGAAATGGAGGGAGGTCCGGACGAGGCGTCGCAAT
CGCCGCAAACGCCAGGGTCGCGGCCAAGCGCTAGCCCACCACAAAGACAC
GGAGTGTCGGCGGTCACGGGGGGAGGGAGTGCGGGCGCTAGCGCTCACCC
CAGCTGGCTGACGGAAGAGCACATCGCCCGGCAATGCCCCGAGGTGGCGG
CGCACTCGGTGCACCTCCCCATGCTGGACGGGTCCAGCCCCATCTTTCGT
TTTCTCAGGCTTGTGAGCGCAGAGTGCGAGCTCCTCCCGAGCCGCGAGCG
CTGCCCGTACATGGTGGTCGCAGAGCTCCTGCAGACCGAACGCAACACGC
GCTGTGGCTCTGCGCGTCTGTACACCGGCGGGGCCACGCTGGGCTGCTCG
GTGTGGGACGCGTTAGACCACCGAGTGTTCCCCGAGAGCCTCCTGTATCC
CGACGACCACCCTGCCATGCGCTACCCGGTGCGCCCTTTCGTCTTCAACA
ACGACTACAACGACGAGGACGACTACTTCCTCGACCTCCATGCCACGCCC
CACGCCCCGCCCCATCACTCCCGCTCTCTCCCACACCATCGCCCGCTCCC
CCCTCCCCAGGCGCCCCTCCCCCCCCCTCTCGCCTTCGACGAGGACACCC
TTTCGGCCATGGACCCTCGCCTCCTCGACCCCAGCACCCGCCGAGCCATC
ACGGTCCGGAAAGTGTTCGGCGAGCTCTGGCACTGGAAGGAGCAGCGTAT
TCGCAACTCTTCCCCCTTCGGGCGCCTGGAGGGATGGCGCCTGGCCATGT
TCATCGTCAAGGCCGGGGACGACCTACGGCAGGAGCAGGTGGCGATGCAG
CTCATCACGCTCGTGCGCGAGATTTTCAAAGAGGAGGGTCTGGAGCTGTG
GCTGCGTCCCTACGACATCGTCTGTGTGGGGGACCAGGCTGGCCTGATCG
AGGCCGTGGCCGATGCCAAATCCATCGACCACATCAAGAAGCGGGCGCCG
CACTTCACCAGTTTGAAGGAGTACTACGAGCGCATCTACGGGGGCCCGTA
CTCTCGCACGTTCCGGGAAGCTCAACGGAATTTCATGCGCTCCTTGGCAG
GCTACTGTGTCTGCACATATTTGCTGCAAGTGAAGGACCGCCACAACGCC
AACATCTTGATCGACAAGCAAGGCCACCTCATCCACATCGACTTCGGCTT
CATGCTAGGGGCCTCGCCCGGCTCCATCTCCTTCGAAAGTGCGCCTTTCA
AACTGACAAAAGAATACGTAGAACTCCTTGGTGGACAGGAGGATATGAAT
TGGCAGGAATTTCGGAGTATGGTGGTGAGGGGCTTCGGGGTGCTTAACCA
GCCAAGACATCGAAGACGGTTGCTCGATCTCATGGCGGTGTCCATTTTTG
AAGTGCCAGGAAAGGCGGCCATATTAGATTCTTTTGATAAGCGACTTGTC
TACGCAAGCTATGCACCCAATGCGTTGGCGCTCGTCGACGAATCTTTCGA
CAACTATCGGACCAAGATGTATGACTCTTACCAGAAGCGACGAAACGGCA
TTTGGTGACACTGTGAGGAAGCCTCAGGTTAACTTGTGATCATACCACCC
ATCCCTTGTGGAAAGATTTGGGGCTTTCAATAGTAATGTATGTCGCGACT
GTGCATACACGGAGTTGGTTTTGTCGCATCTTGCACCAAATCATTTCAGA
CGTAGAGGATTCATCCTGTCACGGAAATAAGGTAAAACATGCACTCAAGA
GTGGAGGCTTTGGGCCACCCAACAAATGACTGTAGGAAATGAGGGGACAG
AGACGCTGTGCTTCTTCTGAAAAAGTGTACAATAAGTGAGACGCGAAAAC
AAGATCTG back to topprotein sequence of rna4910 >rna4910-protein ID=rna4910-protein|Name=rna4910|organism=Nannochloropsis gaditana|type=polypeptide|length=500bp
MSKYVTTADRMAAFKRMKSRPENQVCFDCPTRNPTWASATYGVFICYNCS
ATHRALGVHITFVRSVDLDEWTPQQLLTMRLGGNSNAAQFFRRHGVTHGG
KVEQKYSSRAAELYKSHLSKLVADKIVMDANALEPPPPTDTVVAVGCGLD
NLMLSYQEPEDVPVGGAGSSDGDGLAPISREETTLSPPTASDAASEQEAE
KSFAVAATCAPVQQPPARVAVQQDSRRSPTGTYNTLTRGAGELKLSTATG
GGSTIVTEAGGCADLVVGGVSGTGSGMFKTGPRKSTVKGLGARKLGARKM
GTEGAGASSGMASFEEAARQATEAQAAAKQAAQDREQAEKDRKVRELNAF
LGHTPRSGTTMQDWAAPLPASPVVQEYRLALTREETGPSVSTGPLAAKFS
TAKGIGSDQLFGNDEETADMRHERQTKLAGLHGARAISSDMYFGDGQDTD
CVRGYNAGGPDVDELAAHAAERLRSVGQNVARGVGLLKDASSNFFESFRA back to topmRNA from alignment at CM002464.1:644487..646983+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4910 ID=rna4910|Name=rna4910|organism=Nannochloropsis gaditana|type=mRNA|length=2497bp|location=Sequence derived from alignment at CM002464.1:644487..646983+ (Nannochloropsis gaditana)
GACATCTTAGATGCGCCGGCGATTGTGTCGTGTGACATGATAGTGGCCAT
AATTTTGAAAGTGGGCGAGAAAACTTTGGCGGAGAGACGATGGcccgcct
tggaggccgctAGCTACCGCCTTTGACTCGCGTGCCCAAGTCCGGCAGAA
CATAATCATCCTATAGAGCTGGTTTAAATTGGTTAGCTCATTTGTTCTTG
ATCTCATGGAGAGACATCGGCGCATTGATTGTGTCCCCTGACGATGTGGG
AATGGTGGGATGGCTCCAGGGCCCAACGCATAACGACGATGACGGCTCTC
AAGACGTTCCACCCATACATGCATTGATCAGGCACCGGAGACAGAAAGCA
TAACATCCGCCGCGATCGATCCAGCACGCCCATGTCCAAGTACGTGACAA
CAGCTGATAGGATGGCGGCTTTCAAACGGATGAAGTCTCGTCCCGAAAAC
CAGGTATGTCGTGTCATGTGTTACATTTCGGATGTCCTGAAAATTTTCAA
TCCTCCTTTTTTGTGAATGGCCACGCTATCCccgtttcttccttttctgc
TATACGCGTAATGAAAAGAAGATTGGCACTTGGTTATGGAAGACAATGAT
GGACCCTGCGAATGACAAATTTAGTCACGAGTCAAACCAGCGAGAGGGGC
TCATAGGCCTAGTCGATCCCCTGGGAAGTTGCTCAATCCACAATGTCTGC
TTGTATACCACATGACTCGAGCAGGTTTGCTTTGATTGTCCGACGCGCAA
TCCGACCTGGGCATCCGCGACATACGGTGTATTTATCTGTTACAACTGCT
CTGCCACCCACCGGGCTCTGGGCGTCCACATCACGTTTGTCCGCTCTGTC
GACTTGGACGAGTGGACCCCGCAACAATTGCTGACCATGCGGCTTGGGGG
AAACTCGAATGCTGCTCAATTTTTCCGGAGGCATGGGGTCACTcatggag
gaaaggtggAACAGAAGTACTCCTCCCGGGCAGCCGAGCTGTACAAGTCG
CACCTCAGTAAATTGGTGGCAGACAAGATAGTTATGGATGCGAATGCCCT
GGAACCACCGCCTCCGACAGACACTGTGGTAGCCGTTGGCTGTGGATTGG
ACAACCTGATGCTTTCGTACCAAGAGCCCGAAGACGTGCCTGTGGGTGGG
GCCGGAAGCAGCGACGGGGACGGCCTAGCCCCCATCTCTCGGGAGGAGAC
CACCTTATCTCCACCCACTGCCTCGGATGCCGCCTCTGAACAGGAAGCCG
AGAAATCTTTCGCAGTCGCCGCGACATGCGCGCCAGTACAGCAACCCCCG
GCCCGCGTGGCCGTACAGCAGGACTCTCGACGCTCGCCCACTGGTACTTA
CAACACCCTGActcggggagcgggggaatTGAAGCTCTCCACCGCGACGG
GCGGAGGATCGACGATCGTTACAGAGGCCGGAGGATGCGCCGACCTTGTC
GTGGGAGGCGTCAGCGGTACAGGAAGCGGAATGTTCAAGACCGGACCGCG
CAAGAGCACGGTGAAGGGCTTGGGCGCGCGAAAACTGGGAGCGCGGAAGA
TGGGAACTGAGGGGGCCGGCGCTAGCTCCGGCATGGCCTCTTTCGAAGAG
GCTGCCAGGCAAGCTACCGAGGCCCAGGCAGCTGCAAAGCAGGCGGCGCA
GGATCGGGAGCAAGCTGAAAAGGATCGGAAGGTGCGGGAGTTGAACGCGT
TCCTGGGCCACACGCCTCGATCGGGCACGACAATGCAGGACTGGGCGGCT
CCTCTACCGGCCTCGCCAGTGGTCCAAGAGTACCGGCTGGCCCTCACCAG
AGAGGAAACGGGGCCATCAGTATCGACCGGGCCGCTGGCCGCCAAGTTCA
GTACGGCCAAGGGCATCGGATCCGACCAGCTGTTTGGAAACGACGAAGAA
ACAGCCGACATGCGCCACGAACGACAAACGAAACTGGCAGGACTACACGG
TGCGCGCGCGATTTCGAGCGACATGTATTTCGGGGATGGGCAGGACACGG
ACTGCGTGCGAGGCTACAATGCTGGCGGCCCGGACGTTGATGAGTTGGCG
GCACATGCCGCGGAGCGTCTTAGGAGTGTGGGTCAAAACGTAGCACGCGG
CGTCGGACTCCTCAAGGATGCAAGTAGCAACTTTTTTGAATCATTTCGAG
CGTGAACGATCAAGGAATAATTTGAGCGCAACGGCGGGACCAGATCAGTC
ACAGAGTTAGCACTCCAACTTGACGGACGCTTTGTGATAGCGAGGGTAGC
CTCTGTCACCAGTCCACGTCCGCTCGGAAGCTCTAGGTTGGAGATAAGGC
TGCAATCTGCCAGCGCACCTTCGTAGGTAAAGCTATGGATCCATTGCTCT
AGATTCAAGGTCCTTTTTGCTGGAAATAGGAACTGTGCGTGGAATCTTTT
TCTTTAAAATGTGTCTTGTGAAAGAGTCTAATTTGCTCCTCTCCGGACGA
AAGCAGTGAAGGTATCGAAAGTCATGATGGCGATTATTTGTTTTAAA back to topCoding sequence (CDS) from alignment at CM002464.1:644487..646983+ >rna4910 ID=rna4910|Name=rna4910|organism=Nannochloropsis gaditana|type=CDS|length=3006bp|location=Sequence derived from alignment at CM002464.1:644487..646983+ (Nannochloropsis gaditana)
ATGTCCAAGTACGTGACAACAGCTGATAGGATGGCGGCTTTCAAACGGAT
GAAGTCTCGTCCCGAAAACCAGGTTTGCTTTGATTGTCCGACGCGCAATC
CGACCTGGGCATCCGCGACATACGGTGTATTTATCTGTTACAACTGCTCT
GCCACCCACCGGGCTCTGGGCGTCCACATCACGTTTGTCCGCTCTGTCGA
CTTGGACGAGTGGACCCCGCAACAATTGCTGACCATGCGGCTTGGGGGAA
ACTCGAATGCTGCTCAATTTTTCCGGAGGCATGGGGTCACTcatggagga
aaggtggAACAGAAGTACTCCTCCCGGGCAGCCGAGCTGTACAAGTCGCA
CCTCAGTAAATTGGTGGCAGACAAGATAGTTATGGATGCGAATGCCCTGG
AACCACCGCCTCCGACAGACACTGTGGTAGCCGTTGGCTGTGGATTGGAC
AACCTGATGCTTTCGTACCAAGAGCCCGAAGACGTGCCTGTGGGTGGGGC
CGGAAGCAGCGACGGGGACGGCCTAGCCCCCATCTCTCGGGAGGAGACCA
CCTTATCTCCACCCACTGCCTCGGATGCCGCCTCTGAACAGGAAGCCGAG
AAATCTTTCGCAGTCGCCGCGACATGCGCGCCAGTACAGCAACCCCCGGC
CCGCGTGGCCGTACAGCAGGACTCTCGACGCTCGCCCACTGGTACTTACA
ACACCCTGActcggggagcgggggaatTGAAGCTCTCCACCGCGACGGGC
GGAGGATCGACGATCGTTACAGAGGCCGGAGGATGCGCCGACCTTGTCGT
GGGAGGCGTCAGCGGTACAGGAAGCGGAATGTTCAAGACCGGACCGCGCA
AGAGCACGGTGAAGGGCTTGGGCGCGCGAAAACTGGGAGCGCGGAAGATG
GGAACTGAGGGGGCCGGCGCTAGCTCCGGCATGGCCTCTTTCGAAGAGGC
TGCCAGGCAAGCTACCGAGGCCCAGGCAGCTGCAAAGCAGGCGGCGCAGG
ATCGGGAGCAAGCTGAAAAGGATCGGAAGGTGCGGGAGTTGAACGCGTTC
CTGGGCCACACGCCTCGATCGGGCACGACAATGCAGGACTGGGCGGCTCC
TCTACCGGCCTCGCCAGTGGTCCAAGAGTACCGGCTGGCCCTCACCAGAG
AGGAAACGGGGCCATCAGTATCGACCGGGCCGCTGGCCGCCAAGTTCAGT
ACGGCCAAGGGCATCGGATCCGACCAGCTGTTTGGAAACGACGAAGAAAC
AGCCGACATGCGCCACGAACGACAAACGAAACTGGCAGGACTACACGGTG
CGCGCGCGATTTCGAGCGACATGTATTTCGGGGATGGGCAGGACACGGAC
TGCGTGCGAGGCTACAATGCTGGCGGCCCGGACGTTGATGAGTTGGCGGC
ACATGCCGCGGAGCGTCTTAGGAGTGTGGGTCAAAACGTAGCACGCGGCG
TCGGACTCCTCAAGGATGCAAGTAGCAACTTTTTTGAATCATTTCGAGCG
TGAATGTCCAAGTACGTGACAACAGCTGATAGGATGGCGGCTTTCAAACG
GATGAAGTCTCGTCCCGAAAACCAGGTTTGCTTTGATTGTCCGACGCGCA
ATCCGACCTGGGCATCCGCGACATACGGTGTATTTATCTGTTACAACTGC
TCTGCCACCCACCGGGCTCTGGGCGTCCACATCACGTTTGTCCGCTCTGT
CGACTTGGACGAGTGGACCCCGCAACAATTGCTGACCATGCGGCTTGGGG
GAAACTCGAATGCTGCTCAATTTTTCCGGAGGCATGGGGTCACTcatgga
ggaaaggtggAACAGAAGTACTCCTCCCGGGCAGCCGAGCTGTACAAGTC
GCACCTCAGTAAATTGGTGGCAGACAAGATAGTTATGGATGCGAATGCCC
TGGAACCACCGCCTCCGACAGACACTGTGGTAGCCGTTGGCTGTGGATTG
GACAACCTGATGCTTTCGTACCAAGAGCCCGAAGACGTGCCTGTGGGTGG
GGCCGGAAGCAGCGACGGGGACGGCCTAGCCCCCATCTCTCGGGAGGAGA
CCACCTTATCTCCACCCACTGCCTCGGATGCCGCCTCTGAACAGGAAGCC
GAGAAATCTTTCGCAGTCGCCGCGACATGCGCGCCAGTACAGCAACCCCC
GGCCCGCGTGGCCGTACAGCAGGACTCTCGACGCTCGCCCACTGGTACTT
ACAACACCCTGActcggggagcgggggaatTGAAGCTCTCCACCGCGACG
GGCGGAGGATCGACGATCGTTACAGAGGCCGGAGGATGCGCCGACCTTGT
CGTGGGAGGCGTCAGCGGTACAGGAAGCGGAATGTTCAAGACCGGACCGC
GCAAGAGCACGGTGAAGGGCTTGGGCGCGCGAAAACTGGGAGCGCGGAAG
ATGGGAACTGAGGGGGCCGGCGCTAGCTCCGGCATGGCCTCTTTCGAAGA
GGCTGCCAGGCAAGCTACCGAGGCCCAGGCAGCTGCAAAGCAGGCGGCGC
AGGATCGGGAGCAAGCTGAAAAGGATCGGAAGGTGCGGGAGTTGAACGCG
TTCCTGGGCCACACGCCTCGATCGGGCACGACAATGCAGGACTGGGCGGC
TCCTCTACCGGCCTCGCCAGTGGTCCAAGAGTACCGGCTGGCCCTCACCA
GAGAGGAAACGGGGCCATCAGTATCGACCGGGCCGCTGGCCGCCAAGTTC
AGTACGGCCAAGGGCATCGGATCCGACCAGCTGTTTGGAAACGACGAAGA
AACAGCCGACATGCGCCACGAACGACAAACGAAACTGGCAGGACTACACG
GTGCGCGCGCGATTTCGAGCGACATGTATTTCGGGGATGGGCAGGACACG
GACTGCGTGCGAGGCTACAATGCTGGCGGCCCGGACGTTGATGAGTTGGC
GGCACATGCCGCGGAGCGTCTTAGGAGTGTGGGTCAAAACGTAGCACGCG
GCGTCGGACTCCTCAAGGATGCAAGTAGCAACTTTTTTGAATCATTTCGA
GCGTGA back to top
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