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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100021g75.8732.mrna |
| Orig protein id | gnl|cribi|Naga_100021g75.8732 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:618527..619967 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4896 ID=rna4896|Name=rna4896|organism=Nannochloropsis gaditana|type=mRNA|length=1914bp
GCGATGTTGACGCGGGTAGATTGATTTGAATCTCCATTCTGGGTCACAAT
GTTAGTGCGGGGAGTGTTGCGCATGTTCGTCTGTAACTCACGCGAGATGG
CTCAAGGCATGAGAATCCGCACCCCACCAGGCTAACAGCGTGCTTCATTC
CACAATATTGCCTACACAAGCGATGGGATGCTGTCTCAATGGTTGACCGA
TCCGAGAATGGCGGCGTCCACAACGGAAAGCATACTACCTTTCGTCAGGA
CCGGAAGGAGTCAGCCTGTCACGGATGTCAGTCGAAGCGACGCCCGTGTT
GGGGGCGACAATGCTCCTGGCGGGGGCCTGGACCTGGATTCTAGCAGCAT
AGTGGAGGCTCATCGCCATGCTACCCAAGCAGAGGAGCTGCGACGCGAAG
GACGGTTGCTTGAGGCGGTGCAGGAGCATTGTGAGGCCTCTCACTGCTTC
CTGGAGGCGGCCGAGCGACTGCCCTGTACTCGGAGCTTGACAGTGGCCGC
CCTCGTGCTCCTCTCGGACGGGCATGCCCGGCAGGCGAGAACCCTGCAGC
ATTTTTTGAGAAGGCGGGAGCGGACTTCTTCCATCCCAACCGCGTTCGGT
AAAAGTGCCTCCCGTCCCCCGCCCGCTCCATCCAGCAAGAACTTGGCCAC
AGAAGGATCCTTGTGCTCCTCCGCCATGGTCAGCAGCACCGCAAGCATGG
GCGGCACGGGCACCGTCGCAGACACGGGGGCTGTGGACGACATGCTGGCC
CTCGAGCGCGCCCTCCAAGCCATCGGGTCTCAGCCCCTCTTCTCCAGCGG
GCTTTACCAGCCCACTGGCGCTGGCGGTCATCAGGGTGTGCCCGGAGGAC
GCTACCTGTCCTCGACTCTGGGCGACTCCTTCTTCCTCGTCAATAACCGG
CAGGCCGCGGCACGCGAGGGGGCTTCTCTGGCCTGGGAGGGCGGGAGCAG
CGCCTTGGGCTCCTCCCGACACTCGCGGGGGGCTGGACGGGGTGCAGCTG
CCAGTCTGCGCAAACCCTCCTCGGTTGCCGTCGCCGCACCCCCGCGGACG
TCGGCTGGGACGGAAGAATCGCCATTCTCGCGCCAGGGTGCCTCGACAGC
CTTGCCGGCGGCTTCGAACCTGTCCCGCTCAAGGAAGAGCTCTTCGTCCA
CTGCGACCGCTTCCAGTACGCCACTTTCAAGTAGCGTCGGCAGCGGTACC
GTCGGGGGCGGCGGCGGTTTCTTGGAAGGGGTGGAGGCCGTGCAGCAAGG
AGAGGTGGTGCGTCTGCTGGCGTGCATGAAGACGCTAGGCGACGAGAACG
CCCTGCTCATCAAGAGGGCCGAGGACGGGGAGCGGGCCCGGCAGGAGAAC
GAGCGGATCCGTCGGGAAACTCTGGAGTTTCAGGAGCTGTACGCGAAGCG
CTTCAAGGGCTTGCGGGCGGCGCTGGAGGAGTTTCGAGAGAAGTACCCGC
ACGAGAGCAACCCCGCCAACCACGTGGCCTCTCTGCGGGAGACCGCCCGC
GTCAAGAGCCTCGAGGCCGAGGTGGAGAGTCTGACCGTGCGCCTGAACCG
GGAGAAAGAGGCGGGCAGGAAGAAGGATGCTATGCTCGCCAGGTACCAAG
CCTGGTACACTAAGCTTAGGCAGAGTGTGGGGCAAAAGAAAAGTGCAGCG
GCTGGAAATGGGATGGCGCACCAACAACAGCTTCTCGGGCACCAGCAAAA
GCTCGGCGTGAGAGGAAGCAGTGCTTGCAGCGGAGGCAACAGCAATATTC
GTCCCCCTCAAGGACGTTGAGCGAGACGGAGAAGGAGAGTGTTTATTTAA
TTGGAAAGCAATTGTACAGTCTGATTTTTTTATAGGAAGTTGAGTATTTG
CTACTTTACTTGGGTGCTTTGTACATCACCAAACGAAGAAATTGGCATTA
CGTGACCTTCTTGC back to topprotein sequence of rna4896 >rna4896-protein ID=rna4896-protein|Name=rna4896|organism=Nannochloropsis gaditana|type=polypeptide|length=324bp
MLLRRKPLISVLGVLACLMAVSIRLPLSTASKGDNEDGSIHFISEHFSEA
KDAGESTSESAQYSSVEAPEEVEGGVAPGKARGKARKIIPDKIRAVKTAV
SESHEGESSVPLETIVERLEELERRVQEEEEDDEEREDPGFSLDSLDDDN
KSMLEIVSQTAFDYVTTRLTPKTDRECSWSYSQGKCVPACRCRFQFLAGD
YTLSRACRLNRNATALGLCDPSGLEDSDENMLVRARRLLVRGLGSLDAFL
DRHAPSTSPECDWQWSSLRCAPPSVCRFYFKLGDYHIGRSCRLRTVVEAE
LEAIEVAKARMMEEEEEEEEEEEE back to topmRNA from alignment at CM002464.1:618527..619967+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4896 ID=rna4896|Name=rna4896|organism=Nannochloropsis gaditana|type=mRNA|length=1441bp|location=Sequence derived from alignment at CM002464.1:618527..619967+ (Nannochloropsis gaditana)
CGCGTGAGTTACAGACGAACATGCGCAACACTCCCCGCACTAACATTGTG
ACCCAGAATGGAGATTCAAATCAATCTACCCGCGTCAACATCGCGGTATG
CCACCACGGTTCTAGAAATCGGGGAATGCATGCATTGAATGCGCCGGACA
AACGGTGTACTCATGTGAAGCGCTCGCCCTTTCCACGACACCTCGTGCTC
GGCATCGCAGTTCCTCGCGTGACGCACGGAAAAGGAGCAACAAAGCAATG
TTAATCATATTGAAAGCTTTCACATGTACAATCGCATCACTGCTCCAGAT
ACTTTAAAGATCGTGATTTCCCGTCGTGCGTCTTGCAAGGCAAGGAATGC
TGCTGAGAAGGAAGCCCCTCATCTCGGTCCTGGGAGTCTTGGCCTGCCTT
ATGGCAGTAAGCATTCGTCTCCCGCTCTCTACCGCATCAAAGGGCGACAA
TGAAGACGGTAGCATCCACTTCATCAGTGAGCATTTTTCTGAAGCAAAGG
ATGCAGGAGAATCTACGTCGGAAAGCGCTCAATATTCATCTGTGGAAGCG
CcggaggaggtcgaaggGGGCGTAGCCCCAGGGAAAGCCAGGGGAAAAGC
CCGGAAAATTATCCCGGATAAGATCCGTGCAGTCAAGACGGCTGTTAGCG
AAAGccatgaaggagaaagctcGGTACCTTTAGAAACAATTGTGGAACgt
ctggaggagctggagcggcgcgtgcaggaggaggaggaggacgacgagga
aagggaggacccGGGTTTCTCGTTGGACAGCCTGGATGATGACAACAAGT
CGATGCTTGAAATGTAGGTACACATTTGAAGTCCTGGTGCATGCgcgggg
aaaatggagggaacTTGTGTCGGATTTTGGGGAGAAAAGATCCGGGACGA
CGGCATCTTTCCCACAaactgcccttccccccagtGTCTCCCAGACGGCC
TTTGACTACGTCACCACGCGGCTCACGCCCAAGACGGACCGGGAGTGCTC
GTGGAGCTACAGTCAGGGAAAATGCGTGCCGGCATGCCGGTGCCGCTTCC
AGTTCCTTGCGGGCGACTACACCCTGTCGCGCGCTTGCCGCCTGAACCGG
AATGCCACCGCCCTGGGCCTCTGCGACCCGAGTGGGCTCGAGGATAGCGA
CGAGAACATGCTCGTCCGAGCCCGGCGCCTGCTTGTCCGAGGCCTTGGGA
GTCTGGACGCGTTCCTGGACCGTCATGCCCCGAGCACGAGTCCCGAGTGC
GATTGGCAGTGGTCCTCGCTCCGGTGCGCTCCCCCCTCGGTCTGTCGCTT
CTACTTCAAGCTAGGAGACTATCACATTGGCCGCTCTTGCCGGCTGCGGA
CGGTAGTAGAGGCAGAGCTGGAGGCGATCGAAGTTGCCAAGGcaaggatg
atggaggaggaggaggaggaggaggaggaggaggaggagga back to topCoding sequence (CDS) from alignment at CM002464.1:618527..619967+ >rna4896 ID=rna4896|Name=rna4896|organism=Nannochloropsis gaditana|type=CDS|length=1948bp|location=Sequence derived from alignment at CM002464.1:618527..619967+ (Nannochloropsis gaditana)
ATGCTGCTGAGAAGGAAGCCCCTCATCTCGGTCCTGGGAGTCTTGGCCTG
CCTTATGGCAGTAAGCATTCGTCTCCCGCTCTCTACCGCATCAAAGGGCG
ACAATGAAGACGGTAGCATCCACTTCATCAGTGAGCATTTTTCTGAAGCA
AAGGATGCAGGAGAATCTACGTCGGAAAGCGCTCAATATTCATCTGTGGA
AGCGCcggaggaggtcgaaggGGGCGTAGCCCCAGGGAAAGCCAGGGGAA
AAGCCCGGAAAATTATCCCGGATAAGATCCGTGCAGTCAAGACGGCTGTT
AGCGAAAGccatgaaggagaaagctcGGTACCTTTAGAAACAATTGTGGA
ACgtctggaggagctggagcggcgcgtgcaggaggaggaggaggacgacg
aggaaagggaggacccGGGTTTCTCGTTGGACAGCCTGGATGATGACAAC
AAGTCGATGCTTGAAATtGTCTCCCAGACGGCCTTTGACTACGTCACCAC
GCGGCTCACGCCCAAGACGGACCGGGAGTGCTCGTGGAGCTACAGTCAGG
GAAAATGCGTGCCGGCATGCCGGTGCCGCTTCCAGTTCCTTGCGGGCGAC
TACACCCTGTCGCGCGCTTGCCGCCTGAACCGGAATGCCACCGCCCTGGG
CCTCTGCGACCCGAGTGGGCTCGAGGATAGCGACGAGAACATGCTCGTCC
GAGCCCGGCGCCTGCTTGTCCGAGGCCTTGGGAGTCTGGACGCGTTCCTG
GACCGTCATGCCCCGAGCACGAGTCCCGAGTGCGATTGGCAGTGGTCCTC
GCTCCGGTGCGCTCCCCCCTCGGTCTGTCGCTTCTACTTCAAGCTAGGAG
ACTATCACATTGGCCGCTCTTGCCGGCTGCGGACGGTAGTAGAGGCAGAG
CTGGAGGCGATCGAAGTTGCCAAGGcaaggatgatggaggaggaggagga
ggaggaggaggaggaggaggaggaATGCTGCTGAGAAGGAAGCCCCTCAT
CTCGGTCCTGGGAGTCTTGGCCTGCCTTATGGCAGTAAGCATTCGTCTCC
CGCTCTCTACCGCATCAAAGGGCGACAATGAAGACGGTAGCATCCACTTC
ATCAGTGAGCATTTTTCTGAAGCAAAGGATGCAGGAGAATCTACGTCGGA
AAGCGCTCAATATTCATCTGTGGAAGCGCcggaggaggtcgaaggGGGCG
TAGCCCCAGGGAAAGCCAGGGGAAAAGCCCGGAAAATTATCCCGGATAAG
ATCCGTGCAGTCAAGACGGCTGTTAGCGAAAGccatgaaggagaaagctc
GGTACCTTTAGAAACAATTGTGGAACgtctggaggagctggagcggcgcg
tgcaggaggaggaggaggacgacgaggaaagggaggacccGGGTTTCTCG
TTGGACAGCCTGGATGATGACAACAAGTCGATGCTTGAAATtGTCTCCCA
GACGGCCTTTGACTACGTCACCACGCGGCTCACGCCCAAGACGGACCGGG
AGTGCTCGTGGAGCTACAGTCAGGGAAAATGCGTGCCGGCATGCCGGTGC
CGCTTCCAGTTCCTTGCGGGCGACTACACCCTGTCGCGCGCTTGCCGCCT
GAACCGGAATGCCACCGCCCTGGGCCTCTGCGACCCGAGTGGGCTCGAGG
ATAGCGACGAGAACATGCTCGTCCGAGCCCGGCGCCTGCTTGTCCGAGGC
CTTGGGAGTCTGGACGCGTTCCTGGACCGTCATGCCCCGAGCACGAGTCC
CGAGTGCGATTGGCAGTGGTCCTCGCTCCGGTGCGCTCCCCCCTCGGTCT
GTCGCTTCTACTTCAAGCTAGGAGACTATCACATTGGCCGCTCTTGCCGG
CTGCGGACGGTAGTAGAGGCAGAGCTGGAGGCGATCGAAGTTGCCAAGGc
aaggatgatggaggaggaggaggaggaggaggaggaggaggaggagga back to top
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