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Properties
| Property Name | Value |
|---|
| Product | NADH:ubiquinone oxidoreductase intermediate-associated protein 30 |
| Orig transcript id | gnl|cribi|Naga_100090g6.8837.mrna |
| Orig protein id | gnl|cribi|Naga_100090g6.8837 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1226608..1228283 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna489 ID=rna489|Name=rna489|organism=Nannochloropsis gaditana|type=mRNA|length=2205bp
TTGAGGGCTCTTTTTGCGGTGTGCACGTCTCACCCACGATCTTCCTCTTT
CTAACTTTATGATCGGCCAATGCGTTGCTGTGCGGACGTTCTATCGAGGT
TTCTCATCACGATTTTCTCTGTCCGTTCTAAGAACAGTTGGAAAAGTGGC
GTCCTCCTTATCATCTGTTCGGAGCTACGGTACTTTTTTACCTCTGCTGC
CGTCTTCATGGGAGGAGGACCCCATTACTAGCACTCCATCGAGCTTGACT
TCGTCGAGGACGGCCAATGGCCTGGTATTCCCCGTCTTGTACAGGTTCGT
GGTGTCATGGTGTCGAACACGACGATGAGTGAAAGGGATTAGGCGGCATT
TATGCTGGGGATCCGTCCATACGGCGCATTTGTGAGAATATCTCGTGAGC
TCCACCGCGTTAGCTTTTCAGTTGATGGTATACATATGTCTTGGGTGGAG
CGCTTGGTACATTTGTACTCTCGTGTTTTGTAATCGGCAACTTGTTCGCT
TCATTGCCACCGGTGGGGTGCAGAACGCAGCTTGATTTCTTTTTTGTAGT
CCAAAAAGGCCTGCAAGCTCACGCCTCGATGGCGGATGAATGATTGTTTC
AGTCCTTGACACCGTGCAAACCGCTTTCTTGTCGTCCCTCCTTACCATCA
GGTGCCTACTCCTTGCGGATAGAGAGGGTGAGCTCTGCGGCGTAAGGCTG
GGTTCCGGCAGGCGGCCCGGAGAGCAACTAATCGTCTCCGAGATCGTCAG
CGAGAGCGTGCAGGAGGTGTGTCAGATACGGAAGGGGGACATCGTCACCC
ATGTCAACGGGGCACCCGTGGGCGCCTCCTTCCTTCCCGCACGGGGAGCC
CGACGCCGCCTGCCCGTGGATGAAGAGGGGGATGCCGGGCTTACACAGGG
ATGGCCCATGACATGCCCGTCTACGCAAGCATTGGGAAGGGCTTTCTCAC
CTGGTTTCGAGGGCGAGCACCAGGTCCCGCCACTCCCTTCGGCGCTACCA
GGGCGACCCAAGTTCCGAAACTGCTCTCCTTCTGTCGTCGAGCTCCGGCT
GATACGGGCCAACAGCCTGCCAACCACTCCCCCTTTCTCCTCCTCGCCTT
CCTCCCCTCCCTCATTTCCGTCCTCGCCAGCTTCGTCCTCCCTTCTCCGC
CCGGAGCTTCCCATTTTTTACTACGAGACCCATCCCCGCGACAGCTTGGA
GAGCATCGCGCTGCTGTTTCAGACCACGCCCGAGGTCATTCGCAGGGATA
ACCGGGGCTATTTTCGCGCGGGGGAGCGAGCAGAGGGGACGGTCCCGCCC
GGATTGCTTTTGAAGATTCGGAACCCCTCCTTCCTGGGCGGCAACGGACC
GGGGACAGAGGAGAAAGGGCGCGAAGAAGAGGAGGAAGAGGCGGACGGGG
CGGAAGGGGAAGTTGGCGTGCTTGTCCAATCGAGGGAGGGCTCACCCGTA
CTGGCCTCTGGTGACCTGCGGAGCGACAGCCCCTCTTCCCCCCTTTCCCT
CCCAACCTCCCCCCGCACGTCGTGCCAGAGCCGGTACTGGGAGGTGGGGG
CCGGGGAGTCGGTCTCGGACCTGGCTCGGCGCTTGAAGGTGGGCGTGCTG
GAGCTACGGAGATGGAACCGTCACCTGTTTCCGACGGGGGAGCCGGTCAA
GAGCTTACCTCCGGGTACGCTGGTGCGGATCTTTGCGGCCGGGCATGAGG
GATGGAGGGGGGGAGGAAGATGACAAGTAGGAGGGAGGAGGGAGGGAGGG
GGGAGGCGCGAAGGGGGCATTGGACGCGGTCCGACTAGACAAGGGAGATA
TAATGGGAGGCGGGAGACCTCGAAAGGGAGAGCTTTCTCCTAGGATCTTG
GAGGGAGGGACGCGGCCGATGTGAGCGATTCTTAGGGGGCCTTTGAGGGG
CACAAAGCATTAACTGATGGCCGAGCGAATCGAGCTATGGTCCCGCGGGA
GTGTTTTATAAACATGCCGGTGTGAGGCTTTGATCATGTCATAGGGTATG
ACAGTGCCTCGCGCATCACTTCCGTGGCCGTTGTTAATGGCTGCGGGTAT
AAAGAGGGATGGCAAGGAACAAGGAGGAGGAGATGGCAACTCCTTCTATG
AGACCAGGCAACAAAGACTAAACGAAGAACGTAGATAGCCTCATTCCAGT
GCATGGTTCACGTGAGGGTCCATATGTAAGACGCAAATTTTCTCTGCCCT
CTACC back to topprotein sequence of rna489 >rna489-protein ID=rna489-protein|Name=rna489|organism=Nannochloropsis gaditana|type=polypeptide|length=263bp
MLRHIKELFRIPALQNGVAINKAPLPILSIGNLDNDSSISKLKWSVFTDR
SIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADP
TVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDE
LYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGF
LIADGKTGPFCLEIANVAAVGRIQCRPLRKPSMSDGNGLKKEKRAGTNLE
EDKKTGARSEKSQ back to topmRNA from alignment at CM002455.1:1226608..1228283- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna489 ID=rna489|Name=rna489|organism=Nannochloropsis gaditana|type=mRNA|length=1676bp|location=Sequence derived from alignment at CM002455.1:1226608..1228283- (Nannochloropsis gaditana)
TAGACTACCACTTTGCCAGCATTAATCGTGCCTGCAATATGTGCAGGGCA
TGTTTTTGTCAGTTTGGAGGGATATGCCATACCCAGTGCACAAAAATCTT
TGGCATGGCGTTCAAAGACGCAACTTTCGGGGAGCGCAAACGAGTAGTAG
TGCAGTACACGGGTAGCGTCACGCCGTGGGGAACGGGGGAGGGGAAAAGC
TAGAGTGTGACTGCTACGTATTTTGACTGGTTTTTACCTTTATTGCCCTC
TTTTAAACTTAAGAGAAAAGCGTATTACCGGCTGACTTGTGTGGAAAGCG
AGCTAATAAAAGTCTACACCGAGCGCGCAAAGGTAGGCGCTGGACACGTC
GTGCCATGTTGAGGCACATAAAAGAACTTTTCCGTATTCCTGCCTTGCAA
AATGGCGTCGCTATCAATAAAGGTACGCCAATGAATCATGAAGAAATGCT
GTGTAAAAGGATACGCGTCAAATTTGAACTAACATTGACGACGTGTAACA
CCTTTGAATCATGCCCAGCACCACTACCAATACTATCGATCGGCAACCTC
GACAACGACAGCTCCATCAGCAAGCTGAAGTGGTCCGTGTTCACAGACCG
CAGTATCGGAGGGAAATCAGAAGCCTCTTTCGAAGTTTCGACGACAGGAA
ACCATCCTATAAACGAGACCGATGGGCACACGGGCGAGATTAGACCCCCA
TCTGCGACCTTTTCAGGCAACCTTTCCAATATGCGGCCCGCAGCAGATCC
CACGTAAGTCATGTATAAGACTATCAGTCAAGATTTTGGAAGCTCGAAGG
CACCTTTGGGTAAAACAGATCCTTGGCTACAGAACTCTTGACGTCCTATC
TCGAAATGACGCCAGAAATTTTATTTGTTTCAAATTCCTCTTGGACACCG
CACTTCTTCTTCCGGCGTGTGTATGCAGTGTTAAGCGTACAGGTTACTGT
GCTCTGAAGGTCGAAATGCCGCGGTCTTTCCGAGTGGAGGGCTACGAAGG
CCTCGAGCTTACAGTGAGGACGGACGGTCGGAGCTACATCACTAATCTGG
AGGTATGACACTCAAATGGCCAAGGAAAGATTGTATGGAGCGAGACGTAT
GAAAGTTGTTGCGCGGAGGTGGTTGTCTCTAGTAGCTTTCATTGCATTGA
TCTTCAAGTTGGAACGAGATTTAATTGCGCCGAGTCGTTACTTACCCCCC
TCGCTACGATCCTGCTTTCATCATGCAGGTGGAAAGTTTTTTCCCAGATG
AACTTTATCAAGGTTATATCACAGGTTTGCCTGGCGGCCAATGGTTGACG
ATCCAATTGCCTTTTCAGGACATGACCCTGACACGCCTAGGCCGAATGTC
CTACATTCAAAAAGAGCTTGACAGCACCTTTACGTTGGAATCTATAGGAT
TTTTGATCGCGGACGGGAAGACAGGCCCTTTTTGTCTGGAAATCGCGAAT
GTTGCGGCTGTGGGGAGGATTCAGTGTCGTCCGCTGAGAAAGCCATCGAT
GAGCGATGGGAATGGGTTGAAAAAAGAAAAACGCGCGGGCACAAACCTTG
AGGAGGATAAGAAAACGGGTGCTAGGTCAGAGAAATCTCAATAAAGAAAG
GTCTCCATATGAACGGAACAGGAAATGGGAATGTTCAAACAATAGAAATA
AGAAGAAAAAAGGAGTGTGCCTGTGC back to topCoding sequence (CDS) from alignment at CM002455.1:1226608..1228283- >rna489 ID=rna489|Name=rna489|organism=Nannochloropsis gaditana|type=CDS|length=3168bp|location=Sequence derived from alignment at CM002455.1:1226608..1228283- (Nannochloropsis gaditana)
GTGGAAAGTTTTTTCCCAGATGAACTTTATCAAGGTTATATCACAGGTTT
GCCTGGCGGCCAATGGTTGACGATCCAATTGCCTTTTCAGGACATGACCC
TGACACGCCTAGGCCGAATGTCCTACATTCAAAAAGAGCTTGACAGCACC
TTTACGTTGGAATCTATAGGATTTTTGATCGCGGACGGGAAGACAGGCCC
TTTTTGTCTGGAAATCGCGAATGTTGCGGCTGTGGGGAGGATTCAGTGTC
GTCCGCTGAGAAAGCCATCGATGAGCGATGGGAATGGGTTGAAAAAAGAA
AAACGCGCGGGCACAAACCTTGAGGAGGATAAGAAAACGGGTGCTAGGTC
AGAGAAATCTCAATAATGTTAAGCGTACAGGTTACTGTGCTCTGAAGGTC
GAAATGCCGCGGTCTTTCCGAGTGGAGGGCTACGAAGGCCTCGAGCTTAC
AGTGAGGACGGACGGTCGGAGCTACATCACTAATCTGGAGCACCACTACC
AATACTATCGATCGGCAACCTCGACAACGACAGCTCCATCAGCAAGCTGA
AGTGGTCCGTGTTCACAGACCGCAGTATCGGAGGGAAATCAGAAGCCTCT
TTCGAAGTTTCGACGACAGGAAACCATCCTATAAACGAGACCGATGGGCA
CACGGGCGAGATTAGACCCCCATCTGCGACCTTTTCAGGCAACCTTTCCA
ATATGCGGCCCGCAGCAGATCCCACATGTTGAGGCACATAAAAGAACTTT
TCCGTATTCCTGCCTTGCAAAATGGCGTCGCTATCAATAAAGGTGGAAAG
TTTTTTCCCAGATGAACTTTATCAAGGTTATATCACAGGTTTGCCTGGCG
GCCAATGGTTGACGATCCAATTGCCTTTTCAGGACATGACCCTGACACGC
CTAGGCCGAATGTCCTACATTCAAAAAGAGCTTGACAGCACCTTTACGTT
GGAATCTATAGGATTTTTGATCGCGGACGGGAAGACAGGCCCTTTTTGTC
TGGAAATCGCGAATGTTGCGGCTGTGGGGAGGATTCAGTGTCGTCCGCTG
AGAAAGCCATCGATGAGCGATGGGAATGGGTTGAAAAAAGAAAAACGCGC
GGGCACAAACCTTGAGGAGGATAAGAAAACGGGTGCTAGGTCAGAGAAAT
CTCAATAATGTTAAGCGTACAGGTTACTGTGCTCTGAAGGTCGAAATGCC
GCGGTCTTTCCGAGTGGAGGGCTACGAAGGCCTCGAGCTTACAGTGAGGA
CGGACGGTCGGAGCTACATCACTAATCTGGAGCACCACTACCAATACTAT
CGATCGGCAACCTCGACAACGACAGCTCCATCAGCAAGCTGAAGTGGTCC
GTGTTCACAGACCGCAGTATCGGAGGGAAATCAGAAGCCTCTTTCGAAGT
TTCGACGACAGGAAACCATCCTATAAACGAGACCGATGGGCACACGGGCG
AGATTAGACCCCCATCTGCGACCTTTTCAGGCAACCTTTCCAATATGCGG
CCCGCAGCAGATCCCACATGTTGAGGCACATAAAAGAACTTTTCCGTATT
CCTGCCTTGCAAAATGGCGTCGCTATCAATAAAGGTGGAAAGTTTTTTCC
CAGATGAACTTTATCAAGGTTATATCACAGGTTTGCCTGGCGGCCAATGG
TTGACGATCCAATTGCCTTTTCAGGACATGACCCTGACACGCCTAGGCCG
AATGTCCTACATTCAAAAAGAGCTTGACAGCACCTTTACGTTGGAATCTA
TAGGATTTTTGATCGCGGACGGGAAGACAGGCCCTTTTTGTCTGGAAATC
GCGAATGTTGCGGCTGTGGGGAGGATTCAGTGTCGTCCGCTGAGAAAGCC
ATCGATGAGCGATGGGAATGGGTTGAAAAAAGAAAAACGCGCGGGCACAA
ACCTTGAGGAGGATAAGAAAACGGGTGCTAGGTCAGAGAAATCTCAATAA
TGTTAAGCGTACAGGTTACTGTGCTCTGAAGGTCGAAATGCCGCGGTCTT
TCCGAGTGGAGGGCTACGAAGGCCTCGAGCTTACAGTGAGGACGGACGGT
CGGAGCTACATCACTAATCTGGAGCACCACTACCAATACTATCGATCGGC
AACCTCGACAACGACAGCTCCATCAGCAAGCTGAAGTGGTCCGTGTTCAC
AGACCGCAGTATCGGAGGGAAATCAGAAGCCTCTTTCGAAGTTTCGACGA
CAGGAAACCATCCTATAAACGAGACCGATGGGCACACGGGCGAGATTAGA
CCCCCATCTGCGACCTTTTCAGGCAACCTTTCCAATATGCGGCCCGCAGC
AGATCCCACATGTTGAGGCACATAAAAGAACTTTTCCGTATTCCTGCCTT
GCAAAATGGCGTCGCTATCAATAAAGGTGGAAAGTTTTTTCCCAGATGAA
CTTTATCAAGGTTATATCACAGGTTTGCCTGGCGGCCAATGGTTGACGAT
CCAATTGCCTTTTCAGGACATGACCCTGACACGCCTAGGCCGAATGTCCT
ACATTCAAAAAGAGCTTGACAGCACCTTTACGTTGGAATCTATAGGATTT
TTGATCGCGGACGGGAAGACAGGCCCTTTTTGTCTGGAAATCGCGAATGT
TGCGGCTGTGGGGAGGATTCAGTGTCGTCCGCTGAGAAAGCCATCGATGA
GCGATGGGAATGGGTTGAAAAAAGAAAAACGCGCGGGCACAAACCTTGAG
GAGGATAAGAAAACGGGTGCTAGGTCAGAGAAATCTCAATAATGTTAAGC
GTACAGGTTACTGTGCTCTGAAGGTCGAAATGCCGCGGTCTTTCCGAGTG
GAGGGCTACGAAGGCCTCGAGCTTACAGTGAGGACGGACGGTCGGAGCTA
CATCACTAATCTGGAGCACCACTACCAATACTATCGATCGGCAACCTCGA
CAACGACAGCTCCATCAGCAAGCTGAAGTGGTCCGTGTTCACAGACCGCA
GTATCGGAGGGAAATCAGAAGCCTCTTTCGAAGTTTCGACGACAGGAAAC
CATCCTATAAACGAGACCGATGGGCACACGGGCGAGATTAGACCCCCATC
TGCGACCTTTTCAGGCAACCTTTCCAATATGCGGCCCGCAGCAGATCCCA
CATGTTGAGGCACATAAAAGAACTTTTCCGTATTCCTGCCTTGCAAAATG
GCGTCGCTATCAATAAAG back to top
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