EWM30188.1, cds489 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|585112846|gb|EWM30188.1| (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 [Nannochloropsis gaditana]) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MLRHIKELFRIPALQNGVAINKAPLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQCRPLRKPSMSDGNGLKKEKRAGTNLEEDKKTGARSEKSQ 263
MLRHIKELFRIPALQNGVAINKAPLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQCRPLRKPSMSDGNGLKKEKRAGTNLEEDKKTGARSEKSQ
Sbjct: 1 MLRHIKELFRIPALQNGVAINKAPLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQCRPLRKPSMSDGNGLKKEKRAGTNLEEDKKTGARSEKSQ 263
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|553180778|ref|XP_005853461.1| (hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526] >gi|422295599|gb|EKU22898.1| hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 252.677 bits (644), Expect = 1.055e-75 Identity = 121/126 (96.03%), Postives = 121/126 (96.03%), Query Frame = 0
Query: 23 APLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFP 148
APLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLE P
Sbjct: 335 APLPILSIGNLDNDSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEPHHILP 460
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|813135503|ref|XP_012198512.1| (hypothetical protein SPRG_04716 [Saprolegnia parasitica CBS 223.65] >gi|641536944|gb|KDO30815.1| hypothetical protein SPRG_04716 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 118.627 bits (296), Expect = 1.857e-28 Identity = 74/224 (33.04%), Postives = 118/224 (52.68%), Query Frame = 0
Query: 44 WSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQ----KELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQCRPLR-KPSMSDGNGLKKEKRAGTNLEEDKKTGARSEKS 262
W V +DR+IGG+S SFE T + ++D ++ +A FSG LS + V R+GYCA++ +PR + GYEGL + ++TDGR+Y N + + + P +LY G++ P +W+ +L F D LT G Y+Q +LD + +L +IG +AD K GPF + I + AV ++ + KP +S L + ++D+ R KS
Sbjct: 49 WLVSSDRAIGGESTCSFEFVPTAD----DSDKEAPKV--GAAVFSGRLSLSVQPTEQHVVRSGYCAIRGNVPRGLHLHGYEGLAMRIKTDGRTYRINAQADGWNPHDLYMGFLKA-PANKWVEAELAFSDFILTSRG---YVQVDDPAKLDPS-SLRTIGIALADDKEGPFQISIEWIKAVEKVDTTNIAPKPRVSLKTELLDDDEIAPLEDDDQPKARRPRKS 261
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|669152224|ref|XP_008611674.1| (hypothetical protein SDRG_07607 [Saprolegnia diclina VS20] >gi|530736560|gb|EQC34802.1| hypothetical protein SDRG_07607 [Saprolegnia diclina VS20]) HSP 1 Score: 118.242 bits (295), Expect = 2.308e-28 Identity = 74/225 (32.89%), Postives = 117/225 (52.00%), Query Frame = 0
Query: 44 WSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQ----KELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQCRPLR-KPSMSDGNGLKKEKRAGTNLEEDKKTGARSEKSQ 263
W + +DR+IGG+S +FE T + D + +A FSG LS + V R+GYCA++ +PR + GYEGL + ++TDGR+Y N + + + P +LY G++ P +W+ +L F D LT G Y+Q +LD + +L +IG +AD K GPF I + AV ++ + KP +S L + G LE+D A + K++
Sbjct: 49 WLISSDRAIGGESTCAFEFVPTAD------DSEKDSPKVGAAVFSGRLSLSVQPTEQHVVRSGYCAIRGNVPRGLHLHGYEGLAMRIKTDGRTYRINAQADGWNPHDLYMGFLKA-PANEWVEAELAFSDFILTSRG---YVQVDDPAKLDPS-SLRTIGIALADDKEGPFKFAIEWIKAVEKVDTTNVAPKPRVSLKTELLDDDEIGP-LEDDSSDDANTTKAR 261
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|1214693777|gb|OWZ08007.1| (NADH:ubiquinone oxidoreductase intermediate-associated protein 30 [Phytophthora megakarya]) HSP 1 Score: 116.316 bits (290), Expect = 1.348e-27 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 0
Query: 44 WSVFTDRSIGGKSEASF-------EVSTTGNHPINETDGHT-GEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSY-IQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRI 223
W+ +DRSIGG SE + E T P + + PSA FSG LS + V R+GYCA++ +P+ + GYEG+ + + TDGR Y N+++ES+ P LY G+I P +W+ I LPF+D LT G + + ELD + L+S+GF IAD K G F L I + AV ++
Sbjct: 46 WTASSDRSIGGLSECQWGFYKGTKEQEATKEKPSTRLIHYVKNQDNVPSAVFSGRLSMDCQPTEVGVVRSGYCAVRASVPQELLLHGYEGITMRIMTDGREYRMNVQMESWNPFNLYMGFIR-TPANEWVDITLPFRDFLLTAKGFVKLDDETELDPS-KLKSVGFAIADQKEGEFELRIQWIKAVAQL 232
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|325180797|emb|CCA15207.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 114.39 bits (285), Expect = 2.319e-27 Identity = 67/220 (30.45%), Postives = 115/220 (52.27%), Query Frame = 0
Query: 44 WSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQCRPLRKPSMSDGNGLKKEKRAGTNLEEDKKTGARSEKSQ 263
W + TD+SIGG S+ ++ S+ N ++++ P A FSG LS + V R+GYCA++ P+ ++ G +GL++ V+TDGR + N++ E + P +++ G+I P +W+ I+LPF + LT G + + L +IGF I+D + GPF L + + A+ M D ++E+ + +LEEDK + R+ Q
Sbjct: 4 WVLSTDQSIGGLSQGQWKYSSVSNRTKHDSEESAAVDNLPCAVFSGRLSMACEPTEAGVVRSGYCAVRAPRPKEVQLFGSQGLQMRVKTDGRIFRVNIQTEGWNPFDIHMGFIRA-PPSKWVDIELPFSSLLLTSRGYVKMDDATVLYPSKLLNIGFAISDQEEGPFELRVQWIKAIA----------DMEDACD-ERERLSIDDLEEDKPSLPRNRSPQ 211
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|1173940280|gb|OQR89747.1| (queuine tRNA-ribosyltransferase [Thraustotheca clavata]) HSP 1 Score: 120.168 bits (300), Expect = 3.178e-27 Identity = 72/223 (32.29%), Postives = 114/223 (51.12%), Query Frame = 0
Query: 43 KWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYIQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRI---QCRPLRKPSMSDGNGLKKEKRAGTNLEEDKKTGARSEKS 262
+W V +D++IGG S SFE P E + +A FSGNLS + V R+GYCA++ +P++ + GY+GL + ++TDGR+Y N + +S+ P +LY G++ P +W+ +L F D LT G + + +L +IG +AD GPF + I + A+ + Q P KP++S L +E L +DK+ R KS
Sbjct: 463 EWLVSSDQAIGGSSTCSFEFV-----PHEEMKDDKDAPQAGAAVFSGNLSLSIQPTEQYVVRSGYCAIRGNVPQNLHLHGYKGLAMRIKTDGRTYRINAQADSWNPHDLYMGFLKA-PANEWVEAELAFSDFILTSRGYVQMNDPTKLNPASLRTIGIALADDNEGPFSMAIEWIKAIENVDTTQVAP--KPNVSLKTDLLEEDEVHPELNQDKQEPKRPRKS 677
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|953489736|emb|CEG47102.1| (Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 112.079 bits (279), Expect = 9.535e-26 Identity = 69/199 (34.67%), Postives = 108/199 (54.27%), Query Frame = 0
Query: 36 DSSISKLKWSVFTDRSIGGKSEASFEVSTTGNHPINETDGHTGEI---------RPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSYI-QKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRIQ 224
D+ S +W+ +D+SIGG S+ + TG P+ +D +I R SA F+GNLS + V R+GYCA++ + GYEG+ + + TDGR Y N+++ES+ P L+ G+I P +W+ I LPF++ LT G + + +LD + L+SIGF IAD + G F L I + AV +++
Sbjct: 72 DAKESVAEWTASSDKSIGGLSKCKWGF-YTGEEPMKASDDKASKIFIQNVKKQDRIASAVFTGNLSMDCQPTEAGVIRSGYCAVRASTSSDLLLHGYEGISMRIMTDGREYRMNIQMESWNPFNLFIGFIRT-PPNEWVDIDLPFRNFLLTAKGFVKITDETKLDPS-KLKSIGFAIADQREGEFELRIQWIKAVAQLK 267
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|566011483|gb|ETI34394.1| (hypothetical protein F443_19059 [Phytophthora parasitica P1569] >gi|567977718|gb|ETL28215.1| hypothetical protein L916_18383 [Phytophthora parasitica] >gi|568007184|gb|ETL81427.1| hypothetical protein L917_18211 [Phytophthora parasitica] >gi|568037026|gb|ETM34623.1| hypothetical protein L914_18296 [Phytophthora parasitica]) HSP 1 Score: 110.153 bits (274), Expect = 2.578e-25 Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = 0
Query: 44 WSVFTDRSIGGKSEASF------------EVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSY-IQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRI 223
W+ +DRSIGG SE + E T I+ PSA F+G LS + V R+GYCA++ +P+ + GYEG+ + + TDGR Y N+++ES+ P L+ G+I P +W+ + LPF+D LT G + + ELD + L+S+GF IAD K G F L I + AV ++
Sbjct: 46 WTASSDRSIGGLSECKWGFYKGEQTEETIEDEQTSKRLIHHVKNQDN---VPSAVFTGRLSMDCQPTEVGVVRSGYCAVRASVPQELLLHGYEGIAMRIMTDGREYRMNVQMESWNPFNLHMGFIR-TPPNEWVDVTLPFRDFLLTAKGFVKLGDETELDPS-KLKSVGFAIADQKEGDFELRIQWIKAVAQL 233
BLAST of EWM30188.1 vs. NCBI_GenBank
Match: gi|567949054|gb|ETK74788.1| (hypothetical protein L915_18482 [Phytophthora parasitica] >gi|570939036|gb|ETP04293.1| hypothetical protein F441_18867 [Phytophthora parasitica CJ01A1] >gi|570969311|gb|ETP32430.1| hypothetical protein F442_18840 [Phytophthora parasitica P10297]) HSP 1 Score: 110.153 bits (274), Expect = 3.213e-25 Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = 0
Query: 44 WSVFTDRSIGGKSEASF------------EVSTTGNHPINETDGHTGEIRPPSATFSGNLSNMRPAADPTVKRTGYCALKVEMPRSFRVEGYEGLELTVRTDGRSYITNLEVESFFPDELYQGYITGLPGGQWLTIQLPFQDMTLTRLGRMSY-IQKELDSTFTLESIGFLIADGKTGPFCLEIANVAAVGRI 223
W+ +DRSIGG SE + E T I+ PSA F+G LS + V R+GYCA++ +P+ + GYEG+ + + TDGR Y N+++ES+ P L+ G+I P +W+ + LPF+D LT G + + ELD + L+S+GF IAD K G F L I + AV ++
Sbjct: 46 WTASSDRSIGGLSECKWGFYKGEQTEETIEDEQTSKRLIHHVKNQDN---VPSAVFTGRLSMDCQPTEVGVVRSGYCAVRASVPQELLLHGYEGIAMRIMTDGREYRMNVQMESWNPFNLHMGFIR-TPPNEWVDVTLPFRDFLLTAKGFVKLGDETELDPS-KLKSVGFAIADQKEGDFELRIQWIKAVAQL 233 The following BLAST results are available for this feature:
BLAST of EWM30188.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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