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Properties
| Property Name | Value |
|---|
| Product | radical sam cfr family |
| Orig transcript id | gnl|cribi|Naga_100021g6.8754.mrna |
| Orig protein id | gnl|cribi|Naga_100021g6.8754 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:471994..473611 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4836 ID=rna4836|Name=rna4836|organism=Nannochloropsis gaditana|type=mRNA|length=2357bp
AAAATGCCGTGTGCATGAGCATGTCCAACCCTGACGGTCAATGTTACTGA
CAACTTTGTCATACCACAGTTGAGCTGGCCTGCAAAAATACGTGAGAGCA
GGGGAAAGGGGCCACGCCTCCCCCCTCCAGGCCTCCTGTCAGTGCTGAGG
GCTTCGACACAAGCCTCTGAGTCGTCTCGTCATCAGCCTCCAGCAGAAAA
CGTATACATTTTTCGCCTCGAAGGCGGAAAAAGGTCATGAAGTCGGACAA
ACAAGCCATAGGATGCTACGAAACTAATGAAAGTCCGGCCGGCTGCGAGG
TTTTACAGCTACTACGGCTTTCACGGTTTCTTCTAAATGAGCAAGCAGAG
GGCAAGGGTAGCAAATGCAAGACCTGCTCTTGCAGATGCGTGGCGAGCAA
CCGTGCACGCAGCCGCTCACATCTGCAAAAGGAGCTTGAAAAGGTCTTGC
AGTGTTTGTCTTTTGAAGTGATCATGTATTTGATCCTCCTCCTCTTTGTG
ATGGCCGTGCCAGGAGCGCATGCTTTTTCTGGGCCAACCCCGTCTAGATC
TTCAACGTTGGGATCCCATCACCACCCGCGAAGCGTAGCATTGGAATCTA
CCATTGCAGGGTGGATGTCAGTGGCGGGCTATGATCAGGGCTACGGTGAT
AATCGTGAAAATGACAGGGACGAAAGAGCCAGCTTATATGCGCTCGTCAT
GGACGAACTAGCGCATCGACGGGGCTTGAGTGTCTCGGGCGTTAGACAGG
TGATTCGAAAAACAAAGCCGCAGGACCTGGCAGCACGTTGGAGAGGATGG
CGGCGCAGCTGTGACTGTTTATTATCCCTGGGATTCTCCGCGCAGAATGT
GACGAGCATTCTGCAAGGCAGCAGTGCCTTCCTCCACGAACTGGACCCCG
AGGCGGATATTCGGCGCGTGGTCTTTTACCTGTGGGAGGACCTCGGCTTC
AATAGCTGGGGAAAGATCGGCCTGGGACTGGGGTCATGGCAGCGGCACAA
GTACAAGGTTGTGACCACGGCGCCCGAGGTGCTCCGTCGAAAGCCGGAAG
GGGGGGTGGAGGAGACGGTGGCGACTCTGGAGCAGGTGGGGATGCCGACC
AAGTACATCCTCGACGCCTCTTTCCGCTTCCCCTCCCTCCTGAACGTGCC
TCCCTCCCTCATCTTTTGCGTTTCCGCATACTTGTCCTCCACGGACGTGG
GCTTCCGACCCCGCGACCTGGGCGCCCTCTACCGGCGCAATCCCTGGCTC
CTGCACCCTCGCACTGTCGAGCAGCTCCGGCCTGTTGTGGCCTTCCTCAG
GGAGGAGCTGCAGGTCCAGCGCATGCACGTGGTCCTCCGCGGCTACCCCC
AGGTCGTCCTCAAGAGCGTGAACGCAGATTTGCAGCCGCGCGTGGTCCTG
CTGCAGTCGCTGGGCATTCCATCGCAGCAGATCGGCTGCATGGTAGAGGC
CTTCCCCCTCCTTCTCTCCCTGCCCCTGGAGGAGCAGATGCTGCCCGTGC
TTTTCTTCTTCCAAGCGGAACTCGGCTTTTCGCGGCATGAACTATGGACA
ATGCTGCGTTCCTTTCCCGCCGTGTTGGACTTGTCCATTGAGGAAAACAT
ACGCCCTGTCGTGTCTTTTCTCCGCGATGATGTGGGACTCCCAGATGTGA
AAGAGTTCATCAAACGTCTCCCCCCCGTCCTTGGCTACCCCGTGGACTGG
GAATTGCGGAAGAAGTGGGCGCTTTTCCAGGAGCTGGGCCTCGATGCATC
GGACTTTGCGGGCTTCCCGGGCTTCGTCTCTTACTCCTTGCACGATCGTC
TGATTCCCCGCCTGGACTTCTGTCGACGACAGGGCGTCCTCGCCCAAGAC
GTTGTTGCGCTTCGGGTAGTGATGGCGGGTGGGGACGCGGCATTTGCAAA
GGAGTTTATCGGGGTGGATCCAGAAGCGTACGAGGAGTTTTTGTTGGACT
ACAAAGTGCGGAGGAAGGAAGCACGAGCTGCGCAAACACGAGCTGATCGG
GAAAGCGCTAGGTCGACCCGGTCGTGGAGTGAAAGAAAGAAAGGAGAAAA
AAAATGGGGAAGGATGAAAGACGAGGTTAGCAGCATGGAAGAGGACGATG
ACAGCTTTCTTTTTTCGGAAGCTGTTTGCGACTAAGCAGGTAATAGAGCA
CTAGAAAAATTTGTATCTAACAATCACGCGGCGGTAATGGGCTTGTACCA
GTAAAGGCATGACTAAAAAAGATGTGCGACGTATTTTCTATCGAGGCGCT
ATTTTTTTTTTCCAAATAAAGTCTGCTTTTATAGTGGCGAGAGTAGTCGC
TGTTCAAAATATTCATTCATCAGTGATTGTCGACCAACCAAAAGGAAACT
CCTGGGC back to topprotein sequence of rna4836 >rna4836-protein ID=rna4836-protein|Name=rna4836|organism=Nannochloropsis gaditana|type=polypeptide|length=484bp
MISAHFHRKLAGRGRAGGRLRRTLGRTFALLVMLIGALGSTVVRPRTVTA
CRSSSAFFASTGVLSIRRWQSAVPGRAYPPLPKKAKAVAVPAAAETDNTV
VSRLPSALTDIYALSEQELCGFLQNTLHQPKYRAKQVHAWLYQRGAASFE
EMSDLPKSLRLGLAEHFKLGCLEVAFEQVSKDGTVKRAYRLADGQLIEAV
LMPYEDGRRTACISSQAGCAMGCVFCQTGQMGFARQLTESEIFEQALLFS
RDLTKGGERLSNVVFMGEGEPLNNRRQVFGAVRRLNADLGIGARHITVST
VGLAPRIRDLADAVDDPEGEGALLSQIKVAVSLHATRDAERTAIMPVNRR
FPISELMAACQYYVQRTNRRLSFEWALISGQNDSPQVANELGRLLSPLKG
KCHVNVINVNPTTGFEGQPGSKAAMDRFLNILNEDWGIPATMRVRRGLDI
NAGCGQLKNELLTRELSAKVLAATPPRSPEASSA back to topmRNA from alignment at CM002464.1:471994..473611+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4836 ID=rna4836|Name=rna4836|organism=Nannochloropsis gaditana|type=mRNA|length=1618bp|location=Sequence derived from alignment at CM002464.1:471994..473611+ (Nannochloropsis gaditana)
CAAGACTCTACTCATGGAAGCCATATATATCCCTGCTAGGCTCACAGGGG
CGAGGTGACACAGGAAACACGTTTTGTTTTCACAGGAAAGGGGTCTTCGG
TGCATGATTTCGGCGCATTTTCATCGGAAACttgcaggaagaggaagagc
aggaggacggTTGCGCCGAACCCTGGGGCGTACTTTTGCACTTCTGGTCA
TGCTTATAGGCGCCTTAGGGTCGACTGTCGTGCGACCAAGAACAGTGACT
GCTTGCCGAAGCTCGTCAGCCTTTTTTGCATCCACCGGCGTTTTATCCAT
TCGTCGATGGCAGTCTGCGGTGCCAGGGCGCGcatatcctcctcttccta
aAAAAGCTAAGGCGGTAGCTGTACCTGCTGCAGCTGAGACCGATAATACC
GTCGTGTCTCGCTTGCCGAGCGCATTGACTGACATATATGCGCTTTCAGA
GCAAGAACTATGCGGATTTCTCCAGAAcaccctccaccagcccAAGTACC
GGGCTAAGCAGGTGCATGCCTGGCTCTACCAACGCGGAGCGGCCTCCTTT
GAGGAAATGAGCGACTTGCCCAAGTCCCTTCGCTTGGGTTTGGCGGAGCA
CTTCAAGTTGGGGTGCTTGGAAGTGGCCTTCGAGCAAGTGAGCAAGGATG
GGACCGTCAAACGGGCCTACCGCCTTGCAGACGGGCAACTGATTGAGGCG
GTTCTGATGCCTTACGAGGATGGCAGACGGACGGCCTGCATCTCCAGCCA
AGCAGGCTGCGCCATGGGGTGCGTGTTCTGCCAGACGGGCCAGATGGGCT
TCGCGCGGCAGCTGACCGAGTCCGAGATCTTCGAgcaggccctcctcttc
tccaggGACCTgaccaaggggggggagcgacTGAGCAATGTGGTGTTTAT
GGGTGAGGGTGAGCCCCTCAACAATCGCAGGCAGGTGTTCGGAGCCGTCC
GGCGCCTGAACGCAGACCTTGGCATCGGGGCGCGGCATATCACGGTGTCA
ACGGTGGGCCTGGCCCCCCGAATCCGCGACCTGGCGGACGCGGTGGACGA
cccggagggcgagggagcgcTACTCTCCCAGATAAAAGtggccgtctccc
tccatgcgACCAGGGACGCGGAGCGCACGGCCATCATGCCGGTGAATAGG
CGCTTTCCCATCTCGGAGCTCATGGCCGCGTGCCAGTACTACGTCCAGCG
GACGAATAGGCGGCTCAGCTTCGAGTGGGCGCTGATCAGTGGACAAAACG
ACAGCCCCCAGGTCGCAAATGAGCTCGGTCGGCTGCTTTCACCGCTGAAG
GGGAAGTGTCACGTGAACGTCATCAACGTGAACCCGACCACGGGCTTCGA
GGGCCAGCCGGGGTCCAAGGCGGCCATGGATCGGTTTCTGAACATCCTGA
ACGAGGACTGGGGGATTCCCGCCACTATGCGCGTGCGGCGAGGTCTGGAC
ATCAATGCAGGCTGCGGGCAACTGAAGAACGAGCTACTCACGAGGGAGCT
GTCTGCCAAGGTGTTAGCGGCTACACCGCCCAGGTCCCCCGAGGCATCTT
CAGCGTGAACGAGGCATTCTGGGCTGTTAATACAACCAACAAATGAAAGT
TGATGGACTTGATGTACG back to topCoding sequence (CDS) from alignment at CM002464.1:471994..473611+ >rna4836 ID=rna4836|Name=rna4836|organism=Nannochloropsis gaditana|type=CDS|length=1455bp|location=Sequence derived from alignment at CM002464.1:471994..473611+ (Nannochloropsis gaditana)
ATGATTTCGGCGCATTTTCATCGGAAACttgcaggaagaggaagagcagg
aggacggTTGCGCCGAACCCTGGGGCGTACTTTTGCACTTCTGGTCATGC
TTATAGGCGCCTTAGGGTCGACTGTCGTGCGACCAAGAACAGTGACTGCT
TGCCGAAGCTCGTCAGCCTTTTTTGCATCCACCGGCGTTTTATCCATTCG
TCGATGGCAGTCTGCGGTGCCAGGGCGCGcatatcctcctcttcctaaAA
AAGCTAAGGCGGTAGCTGTACCTGCTGCAGCTGAGACCGATAATACCGTC
GTGTCTCGCTTGCCGAGCGCATTGACTGACATATATGCGCTTTCAGAGCA
AGAACTATGCGGATTTCTCCAGAAcaccctccaccagcccAAGTACCGGG
CTAAGCAGGTGCATGCCTGGCTCTACCAACGCGGAGCGGCCTCCTTTGAG
GAAATGAGCGACTTGCCCAAGTCCCTTCGCTTGGGTTTGGCGGAGCACTT
CAAGTTGGGGTGCTTGGAAGTGGCCTTCGAGCAAGTGAGCAAGGATGGGA
CCGTCAAACGGGCCTACCGCCTTGCAGACGGGCAACTGATTGAGGCGGTT
CTGATGCCTTACGAGGATGGCAGACGGACGGCCTGCATCTCCAGCCAAGC
AGGCTGCGCCATGGGGTGCGTGTTCTGCCAGACGGGCCAGATGGGCTTCG
CGCGGCAGCTGACCGAGTCCGAGATCTTCGAgcaggccctcctcttctcc
aggGACCTgaccaaggggggggagcgacTGAGCAATGTGGTGTTTATGGG
TGAGGGTGAGCCCCTCAACAATCGCAGGCAGGTGTTCGGAGCCGTCCGGC
GCCTGAACGCAGACCTTGGCATCGGGGCGCGGCATATCACGGTGTCAACG
GTGGGCCTGGCCCCCCGAATCCGCGACCTGGCGGACGCGGTGGACGAccc
ggagggcgagggagcgcTACTCTCCCAGATAAAAGtggccgtctccctcc
atgcgACCAGGGACGCGGAGCGCACGGCCATCATGCCGGTGAATAGGCGC
TTTCCCATCTCGGAGCTCATGGCCGCGTGCCAGTACTACGTCCAGCGGAC
GAATAGGCGGCTCAGCTTCGAGTGGGCGCTGATCAGTGGACAAAACGACA
GCCCCCAGGTCGCAAATGAGCTCGGTCGGCTGCTTTCACCGCTGAAGGGG
AAGTGTCACGTGAACGTCATCAACGTGAACCCGACCACGGGCTTCGAGGG
CCAGCCGGGGTCCAAGGCGGCCATGGATCGGTTTCTGAACATCCTGAACG
AGGACTGGGGGATTCCCGCCACTATGCGCGTGCGGCGAGGTCTGGACATC
AATGCAGGCTGCGGGCAACTGAAGAACGAGCTACTCACGAGGGAGCTGTC
TGCCAAGGTGTTAGCGGCTACACCGCCCAGGTCCCCCGAGGCATCTTCAG
CGTGA back to top
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