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Properties
| Property Name | Value |
|---|
| Product | conserved oligomeric golgi complex subunit 4 isoform 1 |
| Orig transcript id | gnl|cribi|Naga_100021g4.8770.mrna |
| Orig protein id | gnl|cribi|Naga_100021g4.8770 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:466177..469048 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4834 ID=rna4834|Name=rna4834|organism=Nannochloropsis gaditana|type=mRNA|length=2383bp
ATGGCTGATGGCCAAGAGCCTTTCTTCCAGCTTCCGCCATCTCCTGTAAT
CGATGAAGCATCCGATGGCGTGGCGTCTCCGCCAGAGCCAGAGGAAAGTA
GCACGGACCCCTTCACTGAGGCCATTGTGCGGTTCCACATGACCCTTGCC
GAGGTGCAGCAGCAGCATAACCGGCCATTATCAGAGCTTCAGACAGAAAA
ATACAGAAAAAATAAAGAAAACGACAACATCGACGAAAAGCTGCTAGCTG
GGCGGGATGTAGCAGCGCCAGCACTGGGCCGCCTCATGGAAGATCTTGAC
GGTATACGCGCTGAGATGTATGTGGGTGACACTGCCGCTGAAACGTCTCC
GGAACAAAAAGATGTTCAGCAGGAAATGCTGGAGGACTGTGAACGCAAAA
CGGGCGATGTGGTGCTGAATTTACTACGCAAGGCCACATCGGCCATAGCT
CCAGACCCGGCTGCCGCTCCGGCGTGGTTTCTTGAGTGCGTGCGGCTCAA
ACAAGAGACCAAGGCGGCCAATATTTATGGAGGATTTCTGCAACGCCGGC
TTATCGAATCGACAGAGGATGCACTACAAGCTCTGGACAGTGTCCGGTCG
CTGCGCCGTCTTCAGATGGGCAGCAGCAACAGCCAGGCCGATGATAGTGA
GGGAGTAGGACAGGACAGTCAGCCTCACGTCACCGGACTGAGTCGACTGC
TGGGGGAGGCCTCCCGAATGATCGGGTCTTTGAGGGGAGAGGGGTATTAC
TGTGAAGATGAGAGCAGCCAGGATGCGGAGACAGGCACGGCGGGGAGCAG
GCACGCTGCCCGTTTCTCCTCGTGGCTTTCTGGACCTTGCCTGGCGAGAA
TGGTGACCTCTCTGAATAATATAGCACAACAGCAAGCGCTCAAGCTCCTG
AAATGGTACAGTGAGGACTGCAGTGTGCGAGAATGGCAGGAGAGGTGCCT
GTCTGCGCGGGGCACGGAGGACTTGGTGGTGCAGGAGTTGGACTTCGCCT
TGGACGAGCTGCAGCTGGTCCTGGGGCTCTCAAACCGTTACTTGGCTTTC
GTCGCCGCCCCTCGAGAGGAATGCATGGATCTCTTCATCCAAGTTCAGGA
GCTCGCGGGGTGCTACGTATCGATGGAAAGCGCCTATTGCACCTTCAACG
TGGCCAAGGCGATAGCCTGGGGGCAGCCCACCGAGGTCCAGGAGGGCGTG
CTCGTGTCTACGCTCGTCGAGGACGTGCCCATGATCCTGAACCGCTCCAT
CGAGCGTGCCACCCAAACGCTGAGCGACCAAGCGATCTTGGCTGTCGCCA
GTCGGGCCACGGAGCTCTTGAGCCCCGACTCGGTCCCCTCCTTCGCGGCA
GCACTACAGGCCCTTGTGGAAGATAGGAGCCTGACGGGGGTGGAGGCCGG
TGGAGGAGCCATGGATCAATTCAGCCGCGCTCTACAGCAGCAGTTAGACG
AGGAAGAAGGGAACGTGACGCACGAAGCCATGATTTACGCCATAAATAGC
ATGGATTGCGCGGTCGCAGCTATGAAAAAGATGCAGGATATGCTGCTAGA
GCTCGGCGTCCGAGGCTCCTGTGAAGGAGAGAGTCAACAAAGGGCAAGGG
GCGGACCGCACATGGTGGAGGCCGTGGCGCAGGAGTTCGGTCGCGTCTTA
AAGCAATATGGCGGGTATCTGGAGGTATTGCTCGACGATTTTGCGTCCCG
CTACGTATCGTCGGGCATCTTAGACTATCTCTCTCAAGTCGTAGGCCGTA
CCAACTACACCATCGATGCCACTACATACGAAAAAGAGGCTGCGGGCCGG
GGGGATCCATTCGTGACGCAGTTTCTGGACTACATGTTTGTCAAGGACAA
AGTGCTGAGGGACTGCAAGGCCGGCATGACGGGGTCGGCACTGCTCGGGT
TTGTGGAGCGCGTGGCCATGAGCTTGTCTCCCGCCTTGATTCAAGCGCTG
GAGGAAAAAGAGTTCACCGAATGGGGAGGCATGAAGCTTCGGCAGCAGGT
TCGACTATTGCAAGAGCAGTTGATGGAGCTTGTTGACGGTCATGGGACAC
TCCTCCCGCAGTTCGCTCGGGTGGACCAGATGGTGACATTGTTGAACCTG
GACAGCCCTGCTGATGTCCATTACCTCATGATGTTAAAGCCTGACATAGT
ACAGCAGCCTGCGTGCGGGCTTGGGGAACACAACAGCAAAGAAGACAAGC
CAAAATCTGCAGAGGTGGTCGGTCGATTGACGCCTGCAGAGGTAAAGCAG
ATTTTGAAGCAACGTGTAGAATTTGATCCGCGGGCAGTGGAGTCTCTAAT
TTTTAAATAACTCCACACAAGGATACCGCTGTAAATTGTATGAGGTGTAT
CAACAGTAAATTAAGCACATCTTTCTGTTATTT back to topprotein sequence of rna4834 >rna4834-protein ID=rna4834-protein|Name=rna4834|organism=Nannochloropsis gaditana|type=polypeptide|length=617bp
MADGQEPFFQLPPSPVIDEASDGVASPPEPEESSTDPFTEAIVRFHMTLA
EVQQQHNRPLSELQTEKYRKNKENDNIDEKLLAGRDVAAPALGRLMEDLD
GIRAEMYVGDTAAETSPEQKDVQQEMLEDCERKTGDVVLNLLRKATSAIA
PDPAAAPAWFLECVRLKQETKAANIYGGFLQRRLIESTEDALQALDSVRS
LRRLQMGSSNSQADDSEGVGQDSQPHVTGLSRLLGEASRMIGSLRGEGYY
CEDESSQDAETGTAGSRHAARFSSWLSGPCLARMVTSLNNIAQQQALKLL
KWYSEDCSVREWQERCLSARGTEDLVVQELDFALDELQLVLGLSNRYLAF
VAAPREECMDLFIQVQELAGCYVSMESAYCTFNVAKAIAWGQPTEVQEGV
LVSTLVEDVPMILNRSIERATQTLSDQAILAVASRATELLSPDSVPSFAA
ALQALVEDRSLTGVEAGGGAMDQFSRALQQQLDEEEGNVTHEAMIYAINS
MDCAVAAMKKMQDMLLELGVRGSCEGESQQRARGGPHMVEAVAQEFGRVL
KQYGGYLEVLLDDFASRYVSSGASSGFSDHVWSDIVYRHSVKAWCHSSPR
SCLFWWAASFVVSGVVL back to topmRNA from alignment at CM002464.1:466177..469048- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4834 ID=rna4834|Name=rna4834|organism=Nannochloropsis gaditana|type=mRNA|length=2872bp|location=Sequence derived from alignment at CM002464.1:466177..469048- (Nannochloropsis gaditana)
ATGGCTGATGGCCAAGAGCCTTTCTTCCAGCTTCCGCCATCTCCTGTAAT
CGATGAAGCATCCGATGGCGTGGCGTCTCCGCCAGAGCCAGAGGAAAGTA
GCACGGACCCCTTCACTGAGGCCATTGTGCGGTTCCACATGACCCTTGCC
GAGGTGCAGCAGCAGCATAACCGGCCATTATCAGAGCTTCAGACAGAAAA
ATACAGAAAAAATAAAGAAAACGACAACATCGACGAAAAGCTGCTAGCTG
GGCGGGATGTAGCAGCGCCAGCACTGGGCCGCCTCATGGAAGATCTTGAC
GGTATACGCGCTGAGATGTATGTGGGTGACACTGCCGCTGAAACGTCTCC
GGAACAAAAAGATGTTCAGCAGGAAATGCTGGAGGACTGTGAACGCAAAA
CGGGCGATGTGGTGCTGAATTTACTACGCAAGGCCACATCGGCCATAGCT
CCAGACCCGGCTGCCGCTCCGGCGTGGTTTCTTGAGTGCGTGCGGCTCAA
ACAAGAGACCAAGGCGGCCAATATTTATGGAGGATTTCTGCAACGCCGGC
TTATCGAATCGACAGAGGATGCACTACAAGCTCTGGACAGTGTCCGGTCG
CTGCGCCGTCTTCAGATGGGCAGCAGCAACAGCCAGGCCGATGATAGTGA
GGGAGTAGGACAGGACAGTCAGCCTCACGTCACCGGACTGAGTCGACTGC
TGGGGGAGGCCTCCCGAATGATCGGGTCTTTGAGGGGAGAGGGGTATTAC
TGTGAAGATGAGAGCAGCCAGGATGCGGAGACAGGCACGGCGGGGAGCAG
GCACGCTGCCCGTTTCTCCTCGTGGCTTTCTGGACCTTGCCTGGCGAGAA
TGGTGACCTCTCTGAATAATATAGCACAACAGCAAGCGCTCAAGCTCCTG
AAATGGTACAGTGAGGACTGCAGTGTGCGAGAATGGCAGGAGAGGTGCCT
GTCTGCGCGGGGCACGGAGGACTTGGTGGTGCAGGAGTTGGACTTCGCCT
TGGACGAGCTGCAGCTGGTCCTGGGGCTCTCAAACCGTTACTTGGCTTTC
GTCGCCGCCCCTCGAGAGGAATGCATGGATCTCTTCATCCAAGTTCAGGA
GCTCGCGGGGTGCTACGTATCGATGGAAAGCGCCTATTGCACCTTCAACG
TGGCCAAGGCGATAGCCTGGGGGCAGCCCACCGAGGTCCAGGAGGGCGTG
CTCGTGTCTACGCTCGTCGAGGACGTGCCCATGATCCTGAACCGCTCCAT
CGAGCGTGCCACCCAAACGCTGAGCGACCAAGCGATCTTGGCTGTCGCCA
GTCGGGCCACGGAGCTCTTGAGCCCCGACTCGGTCCCCTCCTTCGCGGCA
GCACTACAGGCCCTTGTGGAAGATAGGAGCCTGACGGGGGTGGAGGCCGG
TGGAGGAGCCATGGATCAATTCAGCCGCGCTCTACAGCAGCAGTTAGACG
AGGAAGAAGGGAACGTGACGCACGAAGCCATGATTTACGCCATAAATAGC
ATGGATTGCGCGGTCGCAGCTATGAAAAGTAAGTTCTTCGCAGTCGTAAG
GTGGTTAGGTGGAAGCTTCCCATCTGTGTAGTTGCCCTGCGTGAGTGTCC
TTTACGGGGATGATGTAGTCGGCTTTTGGAGTCGAGTATGCCGTCACAGG
CAGAGGGACGCCCGCACGCCGTGAACCCGCCCCCTGCACGCTTGTCTTCC
CCTTCCAGTGAATGACACCACCCTCTCTGGACTGACTCGGCGTTTCCCTT
TTTGGCTAGCAAATGGCTGACTAGACGTGCAATTCCAATATCTGACTTCA
CAAGAGATGCAGGATATGCTGCTAGAGCTCGGCGTCCGAGGCTCCTGTGA
AGGAGAGAGTCAACAAAGGGCAAGGGGCGGACCGCACATGGTGGAGGCCG
TGGCGCAGGAGTTCGGTCGCGTCTTAAAGCAATATGGCGGGTATCTGGAG
GTATTGCTCGACGATTTTGCGTCCCGCTACGTATCGTCGGGTGCGTCCTC
TGGGTTTTCTGACCATGTGTGGTCGGACATTGTATACCGTCATTCTGTCA
AGGCCTGGTGTCATTCCTCTCCCCGGTCTTGCCTATTCTGGTGGGCCGCT
TCATTTGTGGTCTCGGGCGTCGTTCTGTAATCGAATTCTGTTTCGAAGGT
GTTGCAATGCCTCTCCTCTCCCGGCTCTGATGACTTCCCCTTCCTTCCGA
CAGGCATCTTAGACTATCTCTCTCAAGTCGTAGGCCGTACCAACTACACC
ATCGATGCCACTACATACGAAAAAGAGGCTGCGGGCCGGGGGGATCCATT
CGTGACGCAGTTTCTGGACTACATGTTTGTCAAGGACAAAGTGCTGAGGG
ACTGCAAGGCCGGCATGACGGGGTCGGCACTGCTCGGGTTTGTGGAGCGC
GTGGCCATGAGCTTGTCTCCCGCCTTGATTCAAGCGCTGGAGGAAAAAGA
GTTCACCGAATGGGGAGGCATGAAGCTTCGGCAGCAGGTTCGACTATTGC
AAGAGCAGTTGATGGAGCTTGTTGACGGTCATGGGACACTCCTCCCGCAG
TTCGCTCGGGTGGACCAGATGGTGACATTGTTGAACCTGGACAGCCCTGC
TGATGTCCATTACCTCATGATGTTAAAGCCTGACATAGTACAGCAGCCTG
CGTGCGGGCTTGGGGAACACAACAGCAAAGAAGACAAGCCAAAATCTGCA
GAGGTGGTCGGTCGATTGACGCCTGCAGAGGTAAAGCAGATTTTGAAGCA
ACGTGTAGAATTTGATCCGCGGGCAGTGGAGTCTCTAATTTTTAAATAAC
TCCACACAAGGATACCGCTGTAAATTGTATGAGGTGTATCAACAGTAAAT
TAAGCACATCTTTCTGTTATTT back to topCoding sequence (CDS) from alignment at CM002464.1:466177..469048- >rna4834 ID=rna4834|Name=rna4834|organism=Nannochloropsis gaditana|type=CDS|length=3708bp|location=Sequence derived from alignment at CM002464.1:466177..469048- (Nannochloropsis gaditana)
AGATGCAGGATATGCTGCTAGAGCTCGGCGTCCGAGGCTCCTGTGAAGGA
GAGAGTCAACAAAGGGCAAGGGGCGGACCGCACATGGTGGAGGCCGTGGC
GCAGGAGTTCGGTCGCGTCTTAAAGCAATATGGCGGGTATCTGGAGGTAT
TGCTCGACGATTTTGCGTCCCGCTACGTATCGTCGGGTGCGTCCTCTGGG
TTTTCTGACCATGTGTGGTCGGACATTGTATACCGTCATTCTGTCAAGGC
CTGGTGTCATTCCTCTCCCCGGTCTTGCCTATTCTGGTGGGCCGCTTCAT
TTGTGGTCTCGGGCGTCGTTCTGTAAATGGCTGATGGCCAAGAGCCTTTC
TTCCAGCTTCCGCCATCTCCTGTAATCGATGAAGCATCCGATGGCGTGGC
GTCTCCGCCAGAGCCAGAGGAAAGTAGCACGGACCCCTTCACTGAGGCCA
TTGTGCGGTTCCACATGACCCTTGCCGAGGTGCAGCAGCAGCATAACCGG
CCATTATCAGAGCTTCAGACAGAAAAATACAGAAAAAATAAAGAAAACGA
CAACATCGACGAAAAGCTGCTAGCTGGGCGGGATGTAGCAGCGCCAGCAC
TGGGCCGCCTCATGGAAGATCTTGACGGTATACGCGCTGAGATGTATGTG
GGTGACACTGCCGCTGAAACGTCTCCGGAACAAAAAGATGTTCAGCAGGA
AATGCTGGAGGACTGTGAACGCAAAACGGGCGATGTGGTGCTGAATTTAC
TACGCAAGGCCACATCGGCCATAGCTCCAGACCCGGCTGCCGCTCCGGCG
TGGTTTCTTGAGTGCGTGCGGCTCAAACAAGAGACCAAGGCGGCCAATAT
TTATGGAGGATTTCTGCAACGCCGGCTTATCGAATCGACAGAGGATGCAC
TACAAGCTCTGGACAGTGTCCGGTCGCTGCGCCGTCTTCAGATGGGCAGC
AGCAACAGCCAGGCCGATGATAGTGAGGGAGTAGGACAGGACAGTCAGCC
TCACGTCACCGGACTGAGTCGACTGCTGGGGGAGGCCTCCCGAATGATCG
GGTCTTTGAGGGGAGAGGGGTATTACTGTGAAGATGAGAGCAGCCAGGAT
GCGGAGACAGGCACGGCGGGGAGCAGGCACGCTGCCCGTTTCTCCTCGTG
GCTTTCTGGACCTTGCCTGGCGAGAATGGTGACCTCTCTGAATAATATAG
CACAACAGCAAGCGCTCAAGCTCCTGAAATGGTACAGTGAGGACTGCAGT
GTGCGAGAATGGCAGGAGAGGTGCCTGTCTGCGCGGGGCACGGAGGACTT
GGTGGTGCAGGAGTTGGACTTCGCCTTGGACGAGCTGCAGCTGGTCCTGG
GGCTCTCAAACCGTTACTTGGCTTTCGTCGCCGCCCCTCGAGAGGAATGC
ATGGATCTCTTCATCCAAGTTCAGGAGCTCGCGGGGTGCTACGTATCGAT
GGAAAGCGCCTATTGCACCTTCAACGTGGCCAAGGCGATAGCCTGGGGGC
AGCCCACCGAGGTCCAGGAGGGCGTGCTCGTGTCTACGCTCGTCGAGGAC
GTGCCCATGATCCTGAACCGCTCCATCGAGCGTGCCACCCAAACGCTGAG
CGACCAAGCGATCTTGGCTGTCGCCAGTCGGGCCACGGAGCTCTTGAGCC
CCGACTCGGTCCCCTCCTTCGCGGCAGCACTACAGGCCCTTGTGGAAGAT
AGGAGCCTGACGGGGGTGGAGGCCGGTGGAGGAGCCATGGATCAATTCAG
CCGCGCTCTACAGCAGCAGTTAGACGAGGAAGAAGGGAACGTGACGCACG
AAGCCATGATTTACGCCATAAATAGCATGGATTGCGCGGTCGCAGCTATG
AAAAAGATGCAGGATATGCTGCTAGAGCTCGGCGTCCGAGGCTCCTGTGA
AGGAGAGAGTCAACAAAGGGCAAGGGGCGGACCGCACATGGTGGAGGCCG
TGGCGCAGGAGTTCGGTCGCGTCTTAAAGCAATATGGCGGGTATCTGGAG
GTATTGCTCGACGATTTTGCGTCCCGCTACGTATCGTCGGGTGCGTCCTC
TGGGTTTTCTGACCATGTGTGGTCGGACATTGTATACCGTCATTCTGTCA
AGGCCTGGTGTCATTCCTCTCCCCGGTCTTGCCTATTCTGGTGGGCCGCT
TCATTTGTGGTCTCGGGCGTCGTTCTGTAAATGGCTGATGGCCAAGAGCC
TTTCTTCCAGCTTCCGCCATCTCCTGTAATCGATGAAGCATCCGATGGCG
TGGCGTCTCCGCCAGAGCCAGAGGAAAGTAGCACGGACCCCTTCACTGAG
GCCATTGTGCGGTTCCACATGACCCTTGCCGAGGTGCAGCAGCAGCATAA
CCGGCCATTATCAGAGCTTCAGACAGAAAAATACAGAAAAAATAAAGAAA
ACGACAACATCGACGAAAAGCTGCTAGCTGGGCGGGATGTAGCAGCGCCA
GCACTGGGCCGCCTCATGGAAGATCTTGACGGTATACGCGCTGAGATGTA
TGTGGGTGACACTGCCGCTGAAACGTCTCCGGAACAAAAAGATGTTCAGC
AGGAAATGCTGGAGGACTGTGAACGCAAAACGGGCGATGTGGTGCTGAAT
TTACTACGCAAGGCCACATCGGCCATAGCTCCAGACCCGGCTGCCGCTCC
GGCGTGGTTTCTTGAGTGCGTGCGGCTCAAACAAGAGACCAAGGCGGCCA
ATATTTATGGAGGATTTCTGCAACGCCGGCTTATCGAATCGACAGAGGAT
GCACTACAAGCTCTGGACAGTGTCCGGTCGCTGCGCCGTCTTCAGATGGG
CAGCAGCAACAGCCAGGCCGATGATAGTGAGGGAGTAGGACAGGACAGTC
AGCCTCACGTCACCGGACTGAGTCGACTGCTGGGGGAGGCCTCCCGAATG
ATCGGGTCTTTGAGGGGAGAGGGGTATTACTGTGAAGATGAGAGCAGCCA
GGATGCGGAGACAGGCACGGCGGGGAGCAGGCACGCTGCCCGTTTCTCCT
CGTGGCTTTCTGGACCTTGCCTGGCGAGAATGGTGACCTCTCTGAATAAT
ATAGCACAACAGCAAGCGCTCAAGCTCCTGAAATGGTACAGTGAGGACTG
CAGTGTGCGAGAATGGCAGGAGAGGTGCCTGTCTGCGCGGGGCACGGAGG
ACTTGGTGGTGCAGGAGTTGGACTTCGCCTTGGACGAGCTGCAGCTGGTC
CTGGGGCTCTCAAACCGTTACTTGGCTTTCGTCGCCGCCCCTCGAGAGGA
ATGCATGGATCTCTTCATCCAAGTTCAGGAGCTCGCGGGGTGCTACGTAT
CGATGGAAAGCGCCTATTGCACCTTCAACGTGGCCAAGGCGATAGCCTGG
GGGCAGCCCACCGAGGTCCAGGAGGGCGTGCTCGTGTCTACGCTCGTCGA
GGACGTGCCCATGATCCTGAACCGCTCCATCGAGCGTGCCACCCAAACGC
TGAGCGACCAAGCGATCTTGGCTGTCGCCAGTCGGGCCACGGAGCTCTTG
AGCCCCGACTCGGTCCCCTCCTTCGCGGCAGCACTACAGGCCCTTGTGGA
AGATAGGAGCCTGACGGGGGTGGAGGCCGGTGGAGGAGCCATGGATCAAT
TCAGCCGCGCTCTACAGCAGCAGTTAGACGAGGAAGAAGGGAACGTGACG
CACGAAGCCATGATTTACGCCATAAATAGCATGGATTGCGCGGTCGCAGC
TATGAAAA back to top
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