rna4831, rna4831 (mRNA) Nannochloropsis gaditana

Overview
Namerna4831
Unique Namerna4831
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1401
Alignment locationCM002464.1:462518..464016 +

Link to JBrowse

Properties
Property NameValue
Productcytochrome b5 reductase 4
Orig transcript idgnl|cribi|Naga_100021g2.8764.mrna
Orig protein idgnl|cribi|Naga_100021g2.8764
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:462518..464016 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100021g2gene4666Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4831rna4831-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25821.1cds4819Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4831 ID=rna4831|Name=rna4831|organism=Nannochloropsis gaditana|type=mRNA|length=1401bp
CACCCCCTGAGATGACGGGCAGGGGAGGTCAGGGTGGGCGAGCGGCCCGC
TGGCTGCAACACATTTCCCTTCCTGCTTAGAGGGACGCCACTCTTTACCG
TCGCAATTTTCACACGCAAATACACCAGAGATTCCATGACGGACAGCTCA
GATCCAGCGCCAGTGTCGCCAACCTCGATTTGGTCCTCCCGCATGCCCAG
AGAGCTGGCCTCACTCGAGGAGAAGCTCAGGCGCGGAACAAGCACACGGA
CATGTCGGGTCACGGTCCTGTCCAAGACGCTCGACAATGACAACGGGGTC
TGCAAGTGCACCGTTATGCTCAATCGTCGGGACGAGCAAGCAGACGACCG
TGGACCGGACGAGGACGAGCCCTTGGACTTGGGAGAGACGGGAGGCGTCC
TCCTCGAGGTGGACGCCTCCTCCCGGCCGGCAACAGGCGAGGGCACAGGG
GTCTCGGGGGCCACGGCCTATCCCTTCGTCCCTCCCATCATCAATGTCAT
ACAAGGGATTGACCTTTTACCGGCGGCATACGTGGGAGAGGACGGCCGGA
CCCTGCTTCTGGCTGCGTTGAGGGCGTGGACGCCCAAGGTCGGGCTGGCG
GACTTAGTCTTGGCGGCGGCTGAAGCAGTGCAGGGCTTCGAAGGTGCCCA
CGACGAGGATCCTGAGACGAGAGGATATGAGCCCAACCATGTTCTGGACG
TCAGGCACCTCGGAGACCGGCTCTTTCCTGGCTCGGTGCCCCAGCAGGGA
GGGGACATGCTGCCCCGGTACTTGGTAGTGACGGAGGCCTGGGTCCTGAA
CGTCAAGGCGCACGAGGCCAAGCTGGGCTCTGTGGTGGTGGTGAAAGCCC
GCCCCCAGGCGCACATCGGCAAGCTGAGGTACAAGCAGGGTTGCTCGATT
TCGGTGGAGTTCCGAGACGGCGACCGGTGGCTCCTGGCCATGTCCCGGGC
CCAGGAGTGCGTCGAGGCGATTCAGGAGGCACTGAGGGCGCGGGGCGTGG
TGGGATTCCGGACCAGCCAGGCCGCCCTTAACCACGTGGCGCGCGCACAG
GCCTATCTACAGGAGGCGCAGCGCCGGGAAGAGGCCGCGGAGGAGGGAGG
GCACTGGACTCTGGCGCAGGTGCGGAGCGTGTGCGATCTATACAAGCAAG
CGACAGAGCGATTTGGGTCCGTCTCCTCGGAGGAAAGCATAGCGAGGACA
GGCGAGGCGGTAGGCCGGCTGCAGTCCTTCCTCAGCCGTCCCGAGGTTCA
GGACTTGCTCGCTCGCACCGCCTCCCCGACCGGCGCGGAGCCACCGGATT
CGGACGAGAGCCCGGACCCTGAGGGCTCAGGAACGCTCTCGTCGCCGCCG
GCGCGGAAAGGCGAGGTTTTTGGCCGGGTCGGCCGTCGCGGACATGGCGT
C
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protein sequence of rna4831

>rna4831-protein ID=rna4831-protein|Name=rna4831|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MATGTPSNKTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVAR
HRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPW
VNLEGLAGKLVVGYLIEEEGATPKDTGLAQEESPQAGLDGSASSGPAAER
AGEDGDSLVTDAAGQSPVDACVGLLAPPPKRFSITAAFGTEEDFAASIEE
NGAVREG
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mRNA from alignment at CM002464.1:462518..464016+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4831 ID=rna4831|Name=rna4831|organism=Nannochloropsis gaditana|type=mRNA|length=1499bp|location=Sequence derived from alignment at CM002464.1:462518..464016+ (Nannochloropsis gaditana)
TCATTTTGTGCTCCTGTTGAGAGCTGGCACACTGAAAAAGGGTTTCTCAA
ATCATGTTTGGGTGCTCAGTTGCCGGGGACAAAGGTCATAAATTACCATA
AGGCCTTCCCCAAGGACGCGAATCGTTGCGCTTGATGATGTCACTACGAT
ATGGCCTCACATTTTCACGCTTCATGCGCGCACATTCCAGACAAATTTAC
GTGCGTGAAATGGTCAGGTCCTACTGGCTACGCGGCTAGTACTTTGCTCG
GGAAAAGGACCCCGCATTCAGCATGGCAACAGGCACCCCGAGCAACAAGA
CTGCCCTACGCAAGGGTTTTGGTCTCATGGTGTGTAAAGTAGTAGCGCGG
TAGGTACATGGTGCTGGCTTCGTACTGATGCGCGTATTTCCTTTGCGACA
ACTACAGGATTGGGTAAAGCTGACAACATCCACCCGGGACTTGTCCGGGG
TGCTGCGCATGGGCGGCCTGAGGGGATACCGGATGGAAGAAGTCGCCCGG
CACCGCACGTCAAACGATGCCTGGGCCGTGTTTGCGGGTAAAGTCTACAA
TCTGACTCCCTATCTGCCGTACCATCCCGGAGGGGCCAATATAATCGTAA
AGGCGGCAGGCACGGACTGCACTGCACTCTTCAATAAGCATCATCCGTGG
GTGAACCTGGAGGGATTGGCAGGGGTACGTGCggaagagggaatggaggg
tcGGCCGATTGTTGAATGTATTGTGAACATCTCTTTTCTCCTGATGCACC
TGTCTGGTCCCTGTAACATTTTCTTAACGTCTCGCTTCTGCCTCTCGCTT
TCCTGCAGAAACTGGTCGTCGGGTACCTaatagaggaagaaggcgcgACT
CCGAAGGACACAGGGTTAGCTCAGGAAGAGTCGCCACAGGCAGGGCTTGA
CGGTAGTGCTTCGTCCGGGCcggcggcggagagggcgggagaagacggTG
ACTCTTTGGTAACCGATGCTGCGGGGCAGTCGCCTGTGGACGCGTGTGTG
GGACTACTAGCACCTCCGCCGAAACGCTTCAGCATTACGGCAGCATTCGG
TACAGAGGAAGACTTCGCAGCAAGTATAGAGGAGAACGGGGCAGTAAGAG
AGGGGTGACTCTGGCGATacggcggagaagaggagaatcCTGTGTAGACC
TGAAAGTATTCACAACTGTACATCGAAATGGCCCTAGGATGCAAGAAAGG
AGAGCAATGCCGGAAACTTGATGCTTTGTGAGGTGAAAGGCAAGGAAAAT
TCGCGGGCACATGCTTGTGAGAACTACGCATGCGCATGACAAGCGACCTG
AAAGAGCGAAAGCTTTCGCGGCTGCCTGGTTATGGCGTTCGGGTCTCCGC
CCGATCCTTTCGGTGTGCGTTTTGCACCAGACGCACGCATGCAAATAAAG
AAAAGAGTAACCCAATGCGGTCTTGGGAAAAACTTCCGACACTCGGATAA
GTGCCGGGCCCGTCCTAATTATTTGACGTAATTTTCCTCGCTTATCCCC
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Coding sequence (CDS) from alignment at CM002464.1:462518..464016+

>rna4831 ID=rna4831|Name=rna4831|organism=Nannochloropsis gaditana|type=CDS|length=1872bp|location=Sequence derived from alignment at CM002464.1:462518..464016+ (Nannochloropsis gaditana)
ATGGCAACAGGCACCCCGAGCAACAAGACTGCCCTACGCAAGGGTTTTGG
TCTCATGGATTGGGTAAAGCTGACAACATCCACCCGGGACTTGTCCGGGG
TGCTGCGCATGGGCGGCCTGAGGGGATACCGGATGGAAGAAGTCGCCCGG
CACCGCACGTCAAACGATGCCTGGGCCGTGTTTGCGGGTAAAGTCTACAA
TCTGACTCCCTATCTGCCGTACCATCCCGGAGGGGCCAATATAATCGTAA
AGGCGGCAGGCACGGACTGCACTGCACTCTTCAATAAGCATCATCCGTGG
GTGAACCTGGAGGGATTGGCAGGGAAACTGGTCGTCGGGTACCTaataga
ggaagaaggcgcgACTCCGAAGGACACAGGGTTAGCTCAGGAAGAGTCGC
CACAGGCAGGGCTTGACGGTAGTGCTTCGTCCGGGCcggcggcggagagg
gcgggagaagacggTGACTCTTTGGTAACCGATGCTGCGGGGCAGTCGCC
TGTGGACGCGTGTGTGGGACTACTAGCACCTCCGCCGAAACGCTTCAGCA
TTACGGCAGCATTCGGTACAGAGGAAGACTTCGCAGCAAGTATAGAGGAG
AACGGGGCAGTAAGAGAGGGGTGAATGGCAACAGGCACCCCGAGCAACAA
GACTGCCCTACGCAAGGGTTTTGGTCTCATGGATTGGGTAAAGCTGACAA
CATCCACCCGGGACTTGTCCGGGGTGCTGCGCATGGGCGGCCTGAGGGGA
TACCGGATGGAAGAAGTCGCCCGGCACCGCACGTCAAACGATGCCTGGGC
CGTGTTTGCGGGTAAAGTCTACAATCTGACTCCCTATCTGCCGTACCATC
CCGGAGGGGCCAATATAATCGTAAAGGCGGCAGGCACGGACTGCACTGCA
CTCTTCAATAAGCATCATCCGTGGGTGAACCTGGAGGGATTGGCAGGGAA
ACTGGTCGTCGGGTACCTaatagaggaagaaggcgcgACTCCGAAGGACA
CAGGGTTAGCTCAGGAAGAGTCGCCACAGGCAGGGCTTGACGGTAGTGCT
TCGTCCGGGCcggcggcggagagggcgggagaagacggTGACTCTTTGGT
AACCGATGCTGCGGGGCAGTCGCCTGTGGACGCGTGTGTGGGACTACTAG
CACCTCCGCCGAAACGCTTCAGCATTACGGCAGCATTCGGTACAGAGGAA
GACTTCGCAGCAAGTATAGAGGAGAACGGGGCAGTAAGAGAGGGGTGAAT
GGCAACAGGCACCCCGAGCAACAAGACTGCCCTACGCAAGGGTTTTGGTC
TCATGGATTGGGTAAAGCTGACAACATCCACCCGGGACTTGTCCGGGGTG
CTGCGCATGGGCGGCCTGAGGGGATACCGGATGGAAGAAGTCGCCCGGCA
CCGCACGTCAAACGATGCCTGGGCCGTGTTTGCGGGTAAAGTCTACAATC
TGACTCCCTATCTGCCGTACCATCCCGGAGGGGCCAATATAATCGTAAAG
GCGGCAGGCACGGACTGCACTGCACTCTTCAATAAGCATCATCCGTGGGT
GAACCTGGAGGGATTGGCAGGGAAACTGGTCGTCGGGTACCTaatagagg
aagaaggcgcgACTCCGAAGGACACAGGGTTAGCTCAGGAAGAGTCGCCA
CAGGCAGGGCTTGACGGTAGTGCTTCGTCCGGGCcggcggcggagagggc
gggagaagacggTGACTCTTTGGTAACCGATGCTGCGGGGCAGTCGCCTG
TGGACGCGTGTGTGGGACTACTAGCACCTCCGCCGAAACGCTTCAGCATT
ACGGCAGCATTCGGTACAGAGGAAGACTTCGCAGCAAGTATAGAGGAGAA
CGGGGCAGTAAGAGAGGGGTGA
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Synonyms
Publications