EWM25821.1, cds4819 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|553195200|ref|XP_005856099.1| (hypothetical protein NGA_0331900 [Nannochloropsis gaditana CCMP526] >gi|422292934|gb|EKU20235.1| hypothetical protein NGA_0331900 [Nannochloropsis gaditana CCMP526] >gi|585107688|gb|EWM25821.1| cytochrome b5 reductase 4 [Nannochloropsis gaditana]) HSP 1 Score: 423.705 bits (1088), Expect = 4.094e-150 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 Query: 1 MATGTPSNKTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYLIEEEGATPKDTGLAQEESPQAGLDGSASSGPAAERAGEDGDSLVTDAAGQSPVDACVGLLAPPPKRFSITAAFGTEEDFAASIEENGAVREG 207 MATGTPSNKTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYLIEEEGATPKDTGLAQEESPQAGLDGSASSGPAAERAGEDGDSLVTDAAGQSPVDACVGLLAPPPKRFSITAAFGTEEDFAASIEENGAVREG Sbjct: 1 MATGTPSNKTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYLIEEEGATPKDTGLAQEESPQAGLDGSASSGPAAERAGEDGDSLVTDAAGQSPVDACVGLLAPPPKRFSITAAFGTEEDFAASIEENGAVREG 207
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|302812502|ref|XP_002987938.1| (hypothetical protein SELMODRAFT_127066 [Selaginella moellendorffii] >gi|302824760|ref|XP_002994020.1| hypothetical protein SELMODRAFT_138045 [Selaginella moellendorffii] >gi|300138123|gb|EFJ04902.1| hypothetical protein SELMODRAFT_138045 [Selaginella moellendorffii] >gi|300144327|gb|EFJ11012.1| hypothetical protein SELMODRAFT_127066 [Selaginella moellendorffii]) HSP 1 Score: 127.102 bits (318), Expect = 3.060e-34 Identity = 57/108 (52.78%), Postives = 74/108 (68.52%), Query Frame = 0 Query: 8 NKTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYL 115 NK KGF MDW+KLT S DL+G+ R MEEV +HR +DAW V G+VYN+TPYL +HPGG ++++KAAG DCT+LFNK+H WVN E L + ++G L Sbjct: 8 NKVPFEKGFSQMDWLKLTQSHPDLAGLKGRSNRRMIAMEEVKQHRKQDDAWTVLRGRVYNITPYLNFHPGGLDMLMKAAGKDCTSLFNKYHAWVNAEFLLERCLLGAL 115
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|951069380|ref|XP_014490185.1| (PREDICTED: cytochrome b5 domain-containing protein RLF [Vigna radiata var. radiata] >gi|951069382|ref|XP_014490186.1| PREDICTED: cytochrome b5 domain-containing protein RLF [Vigna radiata var. radiata]) HSP 1 Score: 126.331 bits (316), Expect = 1.402e-32 Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 9 KTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYLIEEE 119 K KG+ MDW+KLT + DL+G+ R M+EV +H+T D W V G+VYN++PY+ +HPGG ++++KA G DCT+LFNK+H WVN E L K VVG L E + Sbjct: 116 KVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLISMDEVRKHKTEGDMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCVVGTLDESQ 226
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|1044545041|ref|XP_017438620.1| (PREDICTED: cytochrome b5 domain-containing protein RLF [Vigna angularis] >gi|1044545043|ref|XP_017438621.1| PREDICTED: cytochrome b5 domain-containing protein RLF [Vigna angularis] >gi|1044545045|ref|XP_017438622.1| PREDICTED: cytochrome b5 domain-containing protein RLF [Vigna angularis] >gi|965615837|dbj|BAU00987.1| hypothetical protein VIGAN_11013400 [Vigna angularis var. angularis]) HSP 1 Score: 125.946 bits (315), Expect = 2.007e-32 Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 9 KTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYLIEEE 119 K KG+ MDW+KLT + DL+G+ R M+EV +H+T D W V G+VYN++PY+ +HPGG ++++KA G DCT+LFNK+H WVN E L K VVG L E + Sbjct: 117 KVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLISMDEVRKHKTEGDMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCVVGTLDESQ 227
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|294464394|gb|ADE77709.1| (unknown [Picea sitchensis]) HSP 1 Score: 124.405 bits (311), Expect = 3.500e-32 Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 0 Query: 9 KTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYL 115 K KG+ MDW+KLT + DL+G+ R M+EV +H++ D W V G+VYN++PY+ +HPGG ++++KAAG DCTALFNK+H WVN E L K +VG+L Sbjct: 92 KVPFEKGYSQMDWLKLTQTHPDLAGLKGSSNRRLISMDEVKQHKSEGDIWTVLKGRVYNISPYMKFHPGGEDMLMKAAGKDCTALFNKYHAWVNAEFLLEKCLVGFL 198
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|545371685|ref|XP_005650376.1| (cytochrome b5, partial [Coccomyxa subellipsoidea C-169] >gi|384252356|gb|EIE25832.1| cytochrome b5, partial [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 122.094 bits (305), Expect = 3.621e-32 Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 0 Query: 9 KTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYL 115 K L KG+ MDW++L+ ++DL+G R MEEV HRT +DAW V GKVYN+TPY+ +HPGGA+ I+K AG DCTALFNK+H WVN + L K ++G L Sbjct: 9 KIPLEKGYSQMDWLRLSRGSQDLAGRQGQPLRRDITMEEVKAHRTKSDAWTVLRGKVYNITPYINFHPGGADWIMKGAGMDCTALFNKYHAWVNSDMLLEKCLIGQL 115
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|633905653|gb|KDD72899.1| (hypothetical protein H632_c2760p0, partial [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 124.02 bits (310), Expect = 4.311e-32 Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 0 Query: 16 FGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYLIEEEGA 121 GLMDWV LT S+ DL+G+ R RMEEV +HRT+ D W V KVYNLT Y+P+HPGGA I++ AG D TALFNK+HPWVN + L K +VG L ++ A Sbjct: 34 IGLMDWVHLTRSSSDLAGLKGSPPRRDIRMEEVRQHRTATDCWTVLREKVYNLTAYMPFHPGGAKILMACAGRDGTALFNKYHPWVNSDFLLAKCLVGTLHPDDAA 139
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|1149768040|ref|XP_020148719.1| (cytochrome b5 domain-containing protein RLF [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 124.405 bits (311), Expect = 7.440e-32 Identity = 57/121 (47.11%), Postives = 78/121 (64.46%), Query Frame = 0 Query: 1 MATGTPSNKTALR------KGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYL 115 +A P K+A+R KGF MDW+KLT + DL+G+ R +EEV +H+T + W V G+VYN+ PY+ +HPGG ++++K AG DCTALFNK+H WVN E L K +VGYL Sbjct: 98 LAQPKPLKKSAVRAKVPFEKGFSPMDWLKLTRTHPDLAGLKGQSNRRLISLEEVKQHKTGDCVWTVLKGRVYNIGPYMKFHPGGVDMLMKGAGKDCTALFNKYHAWVNAEFLLEKCLVGYL 218
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|593701193|ref|XP_007151014.1| (hypothetical protein PHAVU_004G011500g [Phaseolus vulgaris] >gi|561024323|gb|ESW23008.1| hypothetical protein PHAVU_004G011500g [Phaseolus vulgaris]) HSP 1 Score: 124.02 bits (310), Expect = 7.501e-32 Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 9 KTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYLIEEE 119 K KG+ MDW+KLT + DL+G+ R ++EV +H+T D W V G+VYN++PY+ +HPGG ++++KA G DCT+LFNK+H WVN E L K VVG L E + Sbjct: 109 KVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLISIDEVRKHKTEGDMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCVVGTLDESQ 219
BLAST of EWM25821.1 vs. NCBI_GenBank
Match: gi|514725904|ref|XP_004955848.1| (PREDICTED: cytochrome b5 domain-containing protein RLF-like [Setaria italica] >gi|944258819|gb|KQL23076.1| hypothetical protein SETIT_031089mg [Setaria italica] >gi|944258820|gb|KQL23077.1| hypothetical protein SETIT_031089mg [Setaria italica]) HSP 1 Score: 124.02 bits (310), Expect = 8.704e-32 Identity = 52/107 (48.60%), Postives = 72/107 (67.29%), Query Frame = 0 Query: 9 KTALRKGFGLMDWVKLTTSTRDLSGVLRMGGLRGYRMEEVARHRTSNDAWAVFAGKVYNLTPYLPYHPGGANIIVKAAGTDCTALFNKHHPWVNLEGLAGKLVVGYL 115 K KG+ MDW+KLT + DL+G+ R +EEV +H+T + W V G+VYN+ PY+ +HPGG ++++KAAG DCTALFNK+H WVN E L K +VG+L Sbjct: 104 KVPFEKGYSQMDWLKLTQTHPDLAGLKGQSNRRLISLEEVKQHKTGDCIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDCTALFNKYHAWVNAEFLLEKCLVGFL 210 The following BLAST results are available for this feature:
BLAST of EWM25821.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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