rna4830, rna4830 (mRNA) Nannochloropsis gaditana

Overview
Namerna4830
Unique Namerna4830
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length395
Alignment locationCM002464.1:459160..460560 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100021g1.8734.mrna
Orig protein idgnl|cribi|Naga_100021g1.8734
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:459160..460560 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100021g1gene4665Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25791.1cds4818Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4830rna4830-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4830 ID=rna4830|Name=rna4830|organism=Nannochloropsis gaditana|type=mRNA|length=395bp
GAACGACGCCTCGCCCCTCTCTCGGAGCGGCTCAAGCACATGCTGGACCT
AAATTTGCGCAAACCGGCCGCGGACGCCCGGGACAGGCTCCCCAGCCTCG
ACAGCACATCCTCTTCCTCAGGTACCGGCGGAAATAGCCGTACTGGCGCC
GCCGTGGCGGGGGAGGGGCCGGCGCCAATGAGAAGGGGGGGGGGCGTGGA
CGCGGAATTGCACGAGCTTGACGAGGCGCTGGGTGAAGCCAGTAGGGAGT
GGGAGGGTTTGCGATCTCCCGGGCCAGTCCAGACATTAGAAGAGCCTCTT
ACTGGAAGTGAGGAAGAGGAAATTGTAATATAATTCTTTTGTGCAGGACC
AAAGGAAATCCAAGACATGTTATTGTCGCCTTCATAATCGAATCG
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protein sequence of rna4830

>rna4830-protein ID=rna4830-protein|Name=rna4830|organism=Nannochloropsis gaditana|type=polypeptide|length=422bp
MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLD
NDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPAT
GEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTP
KVGLADLVLAAAEAVQGFEGAHDEDPETRGYEPNHVLDVRHLGDRLFPGS
VPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYK
QGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNH
VARAQAYLQEAQRREEAAEEGGHWTLAQVRSVCDLYKQATERFGSVSSEE
SIARTGEAVGRLQSFLSRPEVQDLLARTASPTGAEPPDSDESPDPEGSGT
LSSPPARKGEVFGRVGRRGHGV
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mRNA from alignment at CM002464.1:459160..460560-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4830 ID=rna4830|Name=rna4830|organism=Nannochloropsis gaditana|type=mRNA|length=1401bp|location=Sequence derived from alignment at CM002464.1:459160..460560- (Nannochloropsis gaditana)
CACCCCCTGAGATGACGGGCAGGGGAGGTCAGGGTGGGCGAGCGGCCCGC
TGGCTGCAACACATTTCCCTTCCTGCTTAGAGGGACGCCACTCTTTACCG
TCGCAATTTTCACACGCAAATACACCAGAGATTCCATGACGGACAGCTCA
GATCCAGCGCCAGTGTCGCCAACCTCGATTTGGTCCTCCCGCATGCCCAG
AGAGCTGGCCTCACTCGAGGAGAAGCTCAGGCGCGGAACAAGCACACGGA
CATGTCGGGTCACGGTCCTGTCCAAGACGCTCGACAATGACAACGGGGTC
TGCAAGTGCACCGTTATGCTCAATCGTCGGGACGAGCAAGCAGACGACCG
TGGACCGGACGAGGACGAGCCCTTGGACTTGGGAGAGACGGGAGGCGTCC
TCCTCGAGGTGGACGCCTCCTCCCGGCCGGCAACAGGCGAGGGCACAGGG
GTCTCGGGGGCCACGGCCTATCCCTTCGTCCCTCCCATCATCAATGTCAT
ACAAGGGATTGACCTTTTACCGGCGGCATACGTGGGAGAGGACGGCCGGA
CCCTGCTTCTGGCTGCGTTGAGGGCGTGGACGCCCAAGGTCGGGCTGGCG
GACTTAGTCTTGGCGGCGGCTGAAGCAGTGCAGGGCTTCGAAGGTGCCCA
CGACGAGGATCCTGAGACGAGAGGATATGAGCCCAACCATGTTCTGGACG
TCAGGCACCTCGGAGACCGGCTCTTTCCTGGCTCGGTGCCCCAGCAGGGA
GGGGACATGCTGCCCCGGTACTTGGTAGTGACGGAGGCCTGGGTCCTGAA
CGTCAAGGCGCACGAGGCCAAGCTGGGCTCTGTGGTGGTGGTGAAAGCCC
GCCCCCAGGCGCACATCGGCAAGCTGAGGTACAAGCAGGGTTGCTCGATT
TCGGTGGAGTTCCGAGACGGCGACCGGTGGCTCCTGGCCATGTCCCGGGC
CCAGGAGTGCGTCGAGGCGATTCAGGAGGCACTGAGGGCGCGGGGCGTGG
TGGGATTCCGGACCAGCCAGGCCGCCCTTAACCACGTGGCGCGCGCACAG
GCCTATCTACAGGAGGCGCAGCGCCGGGAAGAGGCCGCGGAGGAGGGAGG
GCACTGGACTCTGGCGCAGGTGCGGAGCGTGTGCGATCTATACAAGCAAG
CGACAGAGCGATTTGGGTCCGTCTCCTCGGAGGAAAGCATAGCGAGGACA
GGCGAGGCGGTAGGCCGGCTGCAGTCCTTCCTCAGCCGTCCCGAGGTTCA
GGACTTGCTCGCTCGCACCGCCTCCCCGACCGGCGCGGAGCCACCGGATT
CGGACGAGAGCCCGGACCCTGAGGGCTCAGGAACGCTCTCGTCGCCGCCG
GCGCGGAAAGGCGAGGTTTTTGGCCGGGTCGGCCGTCGCGGACATGGCGT
C
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Coding sequence (CDS) from alignment at CM002464.1:459160..460560-

>rna4830 ID=rna4830|Name=rna4830|organism=Nannochloropsis gaditana|type=CDS|length=1266bp|location=Sequence derived from alignment at CM002464.1:459160..460560- (Nannochloropsis gaditana)
ATGACGGACAGCTCAGATCCAGCGCCAGTGTCGCCAACCTCGATTTGGTC
CTCCCGCATGCCCAGAGAGCTGGCCTCACTCGAGGAGAAGCTCAGGCGCG
GAACAAGCACACGGACATGTCGGGTCACGGTCCTGTCCAAGACGCTCGAC
AATGACAACGGGGTCTGCAAGTGCACCGTTATGCTCAATCGTCGGGACGA
GCAAGCAGACGACCGTGGACCGGACGAGGACGAGCCCTTGGACTTGGGAG
AGACGGGAGGCGTCCTCCTCGAGGTGGACGCCTCCTCCCGGCCGGCAACA
GGCGAGGGCACAGGGGTCTCGGGGGCCACGGCCTATCCCTTCGTCCCTCC
CATCATCAATGTCATACAAGGGATTGACCTTTTACCGGCGGCATACGTGG
GAGAGGACGGCCGGACCCTGCTTCTGGCTGCGTTGAGGGCGTGGACGCCC
AAGGTCGGGCTGGCGGACTTAGTCTTGGCGGCGGCTGAAGCAGTGCAGGG
CTTCGAAGGTGCCCACGACGAGGATCCTGAGACGAGAGGATATGAGCCCA
ACCATGTTCTGGACGTCAGGCACCTCGGAGACCGGCTCTTTCCTGGCTCG
GTGCCCCAGCAGGGAGGGGACATGCTGCCCCGGTACTTGGTAGTGACGGA
GGCCTGGGTCCTGAACGTCAAGGCGCACGAGGCCAAGCTGGGCTCTGTGG
TGGTGGTGAAAGCCCGCCCCCAGGCGCACATCGGCAAGCTGAGGTACAAG
CAGGGTTGCTCGATTTCGGTGGAGTTCCGAGACGGCGACCGGTGGCTCCT
GGCCATGTCCCGGGCCCAGGAGTGCGTCGAGGCGATTCAGGAGGCACTGA
GGGCGCGGGGCGTGGTGGGATTCCGGACCAGCCAGGCCGCCCTTAACCAC
GTGGCGCGCGCACAGGCCTATCTACAGGAGGCGCAGCGCCGGGAAGAGGC
CGCGGAGGAGGGAGGGCACTGGACTCTGGCGCAGGTGCGGAGCGTGTGCG
ATCTATACAAGCAAGCGACAGAGCGATTTGGGTCCGTCTCCTCGGAGGAA
AGCATAGCGAGGACAGGCGAGGCGGTAGGCCGGCTGCAGTCCTTCCTCAG
CCGTCCCGAGGTTCAGGACTTGCTCGCTCGCACCGCCTCCCCGACCGGCG
CGGAGCCACCGGATTCGGACGAGAGCCCGGACCCTGAGGGCTCAGGAACG
CTCTCGTCGCCGCCGGCGCGGAAAGGCGAGGTTTTTGGCCGGGTCGGCCG
TCGCGGACATGGCGTC
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Synonyms
Publications