EWM25791.1, cds4818 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25791.1 vs. NCBI_GenBank
Match: gi|585107658|gb|EWM25791.1| (hypothetical protein Naga_100021g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 854.744 bits (2207), Expect = 0.000e+0 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0
Query: 1 MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDEDPETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQRREEAAEEGGHWTLAQVRSVCDLYKQATERFGSVSSEESIARTGEAVGRLQSFLSRPEVQDLLARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEVFGRVGRRGHGV 422
MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDEDPETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQRREEAAEEGGHWTLAQVRSVCDLYKQATERFGSVSSEESIARTGEAVGRLQSFLSRPEVQDLLARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEVFGRVGRRGHGV
Sbjct: 1 MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDEDPETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQRREEAAEEGGHWTLAQVRSVCDLYKQATERFGSVSSEESIARTGEAVGRLQSFLSRPEVQDLLARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEVFGRVGRRGHGV 422
BLAST of EWM25791.1 vs. NCBI_GenBank
Match: gi|553195315|ref|XP_005856125.1| (hypothetical protein NGA_0334500 [Nannochloropsis gaditana CCMP526] >gi|422292960|gb|EKU20261.1| hypothetical protein NGA_0334500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 828.165 bits (2138), Expect = 0.000e+0 Identity = 409/412 (99.27%), Postives = 409/412 (99.27%), Query Frame = 0
Query: 1 MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDEDPETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQRREEAAEEGGHWTLAQVRSVCDLYKQATERFGSVSSEESIARTGEAVGRLQSFLSRPEVQDLLARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEVF 412
MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDEDPETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQ REEAAEEGGHWTLAQVRSVCDLYKQATERFGS SSEESIARTGEAVGRLQSFLSRPEVQDLLARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEV
Sbjct: 1 MTDSSDPAPVSPTSIWSSRMPRELASLEEKLRRGTSTRTCRVTVLSKTLDNDNGVCKCTVMLNRRDEQADDRGPDEDEPLDLGETGGVLLEVDASSRPATGEGTGVSGATAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKVGLADLVLAAAEAVQGFEGAHDEDPETRGYEPNHVLDVRHLGDRLFPGSVPQQGGDMLPRYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQXREEAAEEGGHWTLAQVRSVCDLYKQATERFGSFSSEESIARTGEAVGRLQSFLSRPEVQDLLARTASPTGAEPPDSDESPDPEGSGTLSSPPARKGEVL 412
BLAST of EWM25791.1 vs. NCBI_GenBank
Match: gi|299116134|emb|CBN76043.1| (conserved unknown protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 107.071 bits (266), Expect = 2.551e-21 Identity = 83/286 (29.02%), Postives = 132/286 (46.15%), Query Frame = 0
Query: 110 TAYPFVPPIINVIQGIDLLPAAYVGEDGRTLLLAALRAWTPKV-------GLADLVLAAAEA-VQGFEGAHDEDPETRG-YEPNHVLDVRHLGDRLFPGSVPQ----QGGDMLP-------RYLVVTEAWVLNVKAHEAKLGSVVVVKARPQAHIGKLRYKQGCSISVEFRDGDRWLLAMSRAQECVEAIQEALRARGVVGFRTSQAALNHVARAQAYLQEAQRREEAAEEGGHWTLAQVRSVCDLYKQATERFGSVSSEESIARTGEAVGRLQSFLSRPEVQDLL 375
T YPF P+I V++G D++P + + DG L L AWTP +AD+VL A EA + +G D RG P ++ L LFP S P G + P RY+ VT+ +L ++AH ++ VVV A P +++ KL++++G S++V + + ++ ECV+A+ E L G+ G +T+ A V A + + R+E L V DL++QA E + + R E + + FL R +V L
Sbjct: 158 TRYPFECPVIRVLEGDDVMPTSILSGDG-LLSLPGSDAWTPSSTIVNTLQDIADMVLHAKEAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPCSPPAAPLFSGSVLAPGSRRPLDRYVGVTDRQLLELEAHRTRMNKTVVVLAIPLSNLKKLKFRRGASVTVILKTDEAKEFLTPQSYECVQAVTERLEKMGIAGHQTTAGAERQVDHASSLMAALGRKEAQFGVRERPDLTLVEECMDLFRQAAELYSAADD----PRHEEVLAHMHRFLQREDVLSAL 438 The following BLAST results are available for this feature:
BLAST of EWM25791.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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