rna4829, rna4829 (mRNA) Nannochloropsis gaditana

Overview
Namerna4829
Unique Namerna4829
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1075
Alignment locationCM002464.1:458663..459057 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100054g40.5548.mrna
Orig protein idgnl|cribi|Naga_100054g40.5548
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:458663..459057 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100054g40gene4664Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25856.1cds4817Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4829rna4829-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4829 ID=rna4829|Name=rna4829|organism=Nannochloropsis gaditana|type=mRNA|length=1075bp
TGCTCAATTTTCCCTTACACAGCAAGTTATCATATTATGGAGGGCGGTCT
GGCCATCCTCTGTGAGCTATAAGACTCGCGATAAAATTTCAAACGCTGAG
AGGCTTGAGCTCTTCCATTTAAATTAGAGCCGGAATGGGTGAATGGGTAA
TTGCGAGGGCTTCTCGAAATCGCTGTATATCGAAAAGTCGCGGTGACTTC
TCCATTTAGGAGCATGGCGTCATTGCGCCTAGTGTTCGACTCAAAGCGGG
ATGCAAATAATGAAAATGGCTTCTGATTTAAAGTTGAATCCATTTTTTAT
TTTAAAGCGCGGCTGGATAGGGGCTTGGCAGCGAGCCAGAGCGGAAGCAC
CGTGCCGTGATGGATCTATTGGTCAAATCCATCACGAATGTAATGAAGCT
GCTCCTCACAGGCACCATGCAACGCTGGAGATGGTAGCAGCAGTAAACTG
AGATCCTGGACGCGGATGCCGACCTGCTCGCGTCCCGGGGGGAGTGGGAT
TAAAGCCTGCTCAACTCCTGCCAGGAGCTCTGGGAGCTTGCTTCGCGCCA
AGGGCGAGACCGTGCTTCCTGCCTCCCAGGAAGTGCTTTTCCCCCTTGTC
GCCCATGTCCTCAGTCCAGGCAACTCGTTAGAGCTGCTGTCTGGTGGGTG
TCTGCATCTTCATCGTCGTCCTCGAATTCGGCGTTTGTTTGGGATCAGGG
ATCACAGGTACGGTATCCGCGATCGTGCCCGACTTCCTGGGGAGCGAGCC
CGGCAAACAAGGGTATACGAGGTGGGTATATAGGCCCAGCTCGGGGAGGA
TTTTCTCCCGTCAGCTTTTCTTGCTCAGATCCTGCCAGAACTCCTGGGCC
CTATTTTGCGGCGGCAGCAGCCAGCACGCAGGAGGGCACCGGCGATTCCA
AGGCAGAGGCGGACCGTTGTGTGCGGGATGACACCGTTTCCTCCGTTCTC
CTTCTTTGCCGGCATCACGCTAGCCTCTTCCACGCCCAACAAGTCTTGGT
CGGATTGAGTCTTGTTCAATCAAGACAAGACAGTAAAGGCATAAAAGAAA
TTAAAAGAGAACTAATCTTTCCTGC
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protein sequence of rna4829

>rna4829-protein ID=rna4829-protein|Name=rna4829|organism=Nannochloropsis gaditana|type=polypeptide|length=110bp
ERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGA
AVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPL
TGSEEEEIVI
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mRNA from alignment at CM002464.1:458663..459057-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4829 ID=rna4829|Name=rna4829|organism=Nannochloropsis gaditana|type=mRNA|length=395bp|location=Sequence derived from alignment at CM002464.1:458663..459057- (Nannochloropsis gaditana)
GAACGACGCCTCGCCCCTCTCTCGGAGCGGCTCAAGCACATGCTGGACCT
AAATTTGCGCAAACCGGCCGCGGACGCCCGGGACAGGCTCCCCAGCCTCG
ACAGCACATCCTCTTCCTCAGGTACCGGCGGAAATAGCCGTACTGGCGCC
GCCGTGGCGGGGGAGGGGCCGGCGCCAATGAGAAGGGGGGGGGGCGTGGA
CGCGGAATTGCACGAGCTTGACGAGGCGCTGGGTGAAGCCAGTAGGGAGT
GGGAGGGTTTGCGATCTCCCGGGCCAGTCCAGACATTAGAAGAGCCTCTT
ACTGGAAGTGAGGAAGAGGAAATTGTAATATAATTCTTTTGTGCAGGACC
AAAGGAAATCCAAGACATGTTATTGTCGCCTTCATAATCGAATCG
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Coding sequence (CDS) from alignment at CM002464.1:458663..459057-

>rna4829 ID=rna4829|Name=rna4829|organism=Nannochloropsis gaditana|type=CDS|length=333bp|location=Sequence derived from alignment at CM002464.1:458663..459057- (Nannochloropsis gaditana)
GAACGACGCCTCGCCCCTCTCTCGGAGCGGCTCAAGCACATGCTGGACCT
AAATTTGCGCAAACCGGCCGCGGACGCCCGGGACAGGCTCCCCAGCCTCG
ACAGCACATCCTCTTCCTCAGGTACCGGCGGAAATAGCCGTACTGGCGCC
GCCGTGGCGGGGGAGGGGCCGGCGCCAATGAGAAGGGGGGGGGGCGTGGA
CGCGGAATTGCACGAGCTTGACGAGGCGCTGGGTGAAGCCAGTAGGGAGT
GGGAGGGTTTGCGATCTCCCGGGCCAGTCCAGACATTAGAAGAGCCTCTT
ACTGGAAGTGAGGAAGAGGAAATTGTAATATAA
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Synonyms
Publications