EWM25856.1, cds4817 (CDS) Nannochloropsis gaditana

Overview
NameEWM25856.1
Unique Namecds4817
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:458725..459057 -

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Properties
Property NameValue
Protein idEWM25856.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100054g40.5548.mrna
GbkeyCDS
End range.
End range459057
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:458725..459057 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25856.1 vs. NCBI_GenBank
Match: gi|585107724|gb|EWM25856.1| (hypothetical protein Naga_100054g40, partial [Nannochloropsis gaditana])

HSP 1 Score: 212.231 bits (539), Expect = 1.896e-69
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query:    1 ERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGAAVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPLTGSEEEEIVI 110
            ERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGAAVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPLTGSEEEEIVI
Sbjct:    1 ERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGAAVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPLTGSEEEEIVI 110          
BLAST of EWM25856.1 vs. NCBI_GenBank
Match: gi|553195315|ref|XP_005856125.1| (hypothetical protein NGA_0334500 [Nannochloropsis gaditana CCMP526] >gi|422292960|gb|EKU20261.1| hypothetical protein NGA_0334500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 211.075 bits (536), Expect = 2.821e-63
Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
Query:    1 ERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGAAVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPLTGSEEEEIV 109
            ERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGAAVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPLTGSEEEEI 
Sbjct:  432 ERRLAPLSERLKHMLDLNLRKPAADARDRLPSLDSTSSSSGTGGNSRTGAAVAGEGPAPMRRGGGVDAELHELDEALGEASREWEGLRSPGPVQTLEEPLTGSEEEEIT 540          
The following BLAST results are available for this feature:
BLAST of EWM25856.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107724|gb|EWM25856.1|1.896e-69100.00hypothetical protein Naga_100054g40, partial [Nann... [more]
gi|553195315|ref|XP_005856125.1|2.821e-6399.08hypothetical protein NGA_0334500 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4829rna4829Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications