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Properties
| Property Name | Value |
|---|
| Product | thioredoxin domain-containing protein 9 |
| Orig transcript id | gnl|cribi|Naga_100054g34.5552.mrna |
| Orig protein id | gnl|cribi|Naga_100054g34.5552 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:451049..452405 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4824 ID=rna4824|Name=rna4824|organism=Nannochloropsis gaditana|type=mRNA|length=1390bp
TCTACCTTTTATCTTCGGACTGGCGACAAAGCGCTCGCAAGGATGCCGCA
GCTCTCGAATTTAGAGAGAGGTTGGTGGACATTATACCATCTTGTCGGAA
GAGAGAGACAGCAGGCAGCGTCTGGCTCGGATCAAGAAGGCCGGACTAAA
GGAGCTGTTCGAGTGGGAGGTTGCTCGTAAACATACAAGACGTCGCTCCT
CAACGTAAAAGCGTGAGACCCGGCCTTTATTATTGTTCGTGCACCACGCT
CTTGCCCTGGCGGATCTATATGATGCGCGTGTCTTGCAGCGTTTACCCAC
TTTCATGATGGACATGCATATTAAAAATGCGACGAACACTTCGCGTAATA
AGCCTTTCAATGCCCATGTCGTAGCCTTGATGAAGATGTGGGATTGGAAG
ATAGGGATAATTTGAAAACTTGCAGGAGCAATCGCAAGCAGCTCATCCTC
TTTCTCTTGTTGTTCCTTGTCATACCAGCCACGGACGCTATGGGATCTCT
CTTCTCTCGCATCACGAACCCTCGTCGCTACAGAGAGCACTACGAGAACG
AGGAGACCTCTACTCCTGCAGGAGGAAGCAACTCTGCTGCCGCTGCGACC
TCCCCGGTGGCGGAAACGGTGGAGGAAGCTGCACCATTCGATTATATGCC
TCTCCCTAAAGAGCGTGTGGCGACGATCAAGGGGATCTTTGGTTTCGGCC
AGTGGCAGGGCGTGTCCATTATTGAATGGTTCTTCGTACTCTTTTACAGT
ATGGTTGGAGTGATAATGTTCTTGTCGATTGTGCAGGCAATGACCATGGG
CTCAGCAGGCCTGGCAATTCTCTACATGGTGCTGTCGCCCATCTTTTTCG
TGCTCCTCACGATGGCCGCGCGGGTCTTCACTGAGCTTGTGATATCTGTC
CTGATGGTCCCCCACCTCCTCATGAAGAACCAGCAGGAGCTCCAGCGGCA
GATAGGCATCCTCCAACAGCAGCAGCAGTCCTACCTTTCATCAACCCAGC
AGCAACAGCAGCAGCAAGCAGGCTGCCCGGACCTGGAGGCGGGCCATCAG
GACTTCACTACTGTGCACCTGCACTCCGCCACAGGGGAAGGAGGGAGGGA
GGGGCCCTCCAGCAGCAACCCCTCGTCATCGGCCGTCCCGTCGCGTCGTC
ACGTGGGGGAGAATCGCGGCGAGGAGATTGGGATCGCTATGGCCTAGATC
GTCAAGGCGTCTCATTCATAAAAGATGTGTATACTCGAGGGCGGAGGTAG
ACGCGGGCACGGGGCCAGGCGTGGGTGTGATACAGAGCGGGGCGGAAGCT
TCGCACTTCGGAAAAGACTAAGATGAACAAAGATATGCAACCAATTATGA
CAGAGTTTAAAAGCACACAACGCACGAATGTCGACTAAAA back to topprotein sequence of rna4824 >rna4824-protein ID=rna4824-protein|Name=rna4824|organism=Nannochloropsis gaditana|type=polypeptide|length=244bp
METEVFQEVASQQILQLAQEEEAKLDREIQKLETLDEDDFDKLRQRRLEK
LKKAEQQKHIYKQLGHGEYAELASQQEFFDAAKHSPRVVCHFYRPTAKYC
QVVDFHMARLAARHIETRFCKINAEKSPYLVEKLNVYMMPTIVCIKDQKT
THHIKGLDELGGTDEFSSDMFAYVLSSHNVLNYDGGRPDSPTQAAKKKGV
NSIRMAMTGPGGLAPGRRGGTSSIRDGLTETQYDSDGSAEDDVF back to topmRNA from alignment at CM002464.1:451049..452405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4824 ID=rna4824|Name=rna4824|organism=Nannochloropsis gaditana|type=mRNA|length=1357bp|location=Sequence derived from alignment at CM002464.1:451049..452405+ (Nannochloropsis gaditana)
GTCGAGATGGAGCGCTTTCAGGGCCGCCATAGTGACGCGAAGGCAATCAC
TTTGCACTCATGCGAGCTGCATGTCCCTGTTGTCAATATGATCGTCTTGA
CGTACGGTTTATTTGTGTGTCCGACGTGTCTGACGCGTGCACCTTTTTTg
agaggaagccgaggaAGCAGTCAAAATTGTCGGTCTTCCTGTGTCCTTTT
CCGTAGTACCTTTTCCTCAAACTTTTGTCTCAATTTACATGGTATAGGTG
AAGCAATATGGAAACCGAGGTTTTTCAGGAAGTGGCCTCCCAGCAAATAT
TACAGCTTgctcaagaggaagaagcgaaaTTAGACAGGGAGATCCAGAAG
CTCGAGACTCTCGACGAGGATGACTTCGACAAACTTCGGCAGCGTCGTTT
GGAGAAGCTAAAAAAAGcggagcagcagaagcacaTCTACAAACAACTGG
GTCACGGGGAGTATGCTGAGCTGGCAAGTCAGCAAGAGTTTTTCGATGCA
GCGAAGCACAGTCCCCGCGTAGTCTGTCATTTCTACCGACCCACGGCCAA
GTACTGCCAAGTGGTAGACTTTCACATGGCACGACTTGCGGCCCGACACA
TCGAAACGCGATTCTGCAAAATAAATGCCGAGAAGAGCCCATATCTGGTC
GAGAAGCTGAATGTGTACATGATGCCCACGATTGTGTGCATCAAGGACCA
AAAAACGACGCACCACATCAAGGGATTGGACGAGCTGGGGGGCACGGACG
AGTTCTCCTCAGATATGTTCGCCTACGTACTCAGCTCCCACAACGTCTTG
AACTATGATGGTGGCCGGCCTGACAGCCCCACCCAGGcagcgaagaagaa
aggagtaAATTCCATCCGCATGGCCATGACAGGCCCCGGGGGCCTCGCGC
CTGGTCGACGGGGAGGAACTAGCTCCATCCGGGATGGTCTGACCGAGACG
CAGTACGATAGTGACGGGAGTGCAGAGGACGACGTTTTTTAAGTAGCGTT
TTTCTCTTGTATGTGCATGTACGAGGATGTTCTGGGAAGCGTCCAGGTtt
agagggaggggaagatggcgaTGTGGCGCGGCGCATAGGAAATTGCAGTC
TGTAAGAAACATCAAATTAAccaagggaaaaaaagcacTTGCACTTTTAA
GATGCGAAGGGTTTCTTCTTCACCATATATTTTATGTGCGTCGTAGGCTC
TAGGAATAGTAAAGTTCTAGAGACATGCCCTATATGGGATGTagcgggaa
aggagaaacgGAAGACAATGAGTGCTCTGTCGATCAGAAAATTCCAAGTC
CGTCAGCTTCTAAGTGTTCAACCACACTTTTCACAGATAATCCTTTTCAT
AGCCTCG back to topCoding sequence (CDS) from alignment at CM002464.1:451049..452405+ >rna4824 ID=rna4824|Name=rna4824|organism=Nannochloropsis gaditana|type=CDS|length=735bp|location=Sequence derived from alignment at CM002464.1:451049..452405+ (Nannochloropsis gaditana)
ATGGAAACCGAGGTTTTTCAGGAAGTGGCCTCCCAGCAAATATTACAGCT
TgctcaagaggaagaagcgaaaTTAGACAGGGAGATCCAGAAGCTCGAGA
CTCTCGACGAGGATGACTTCGACAAACTTCGGCAGCGTCGTTTGGAGAAG
CTAAAAAAAGcggagcagcagaagcacaTCTACAAACAACTGGGTCACGG
GGAGTATGCTGAGCTGGCAAGTCAGCAAGAGTTTTTCGATGCAGCGAAGC
ACAGTCCCCGCGTAGTCTGTCATTTCTACCGACCCACGGCCAAGTACTGC
CAAGTGGTAGACTTTCACATGGCACGACTTGCGGCCCGACACATCGAAAC
GCGATTCTGCAAAATAAATGCCGAGAAGAGCCCATATCTGGTCGAGAAGC
TGAATGTGTACATGATGCCCACGATTGTGTGCATCAAGGACCAAAAAACG
ACGCACCACATCAAGGGATTGGACGAGCTGGGGGGCACGGACGAGTTCTC
CTCAGATATGTTCGCCTACGTACTCAGCTCCCACAACGTCTTGAACTATG
ATGGTGGCCGGCCTGACAGCCCCACCCAGGcagcgaagaagaaaggagta
AATTCCATCCGCATGGCCATGACAGGCCCCGGGGGCCTCGCGCCTGGTCG
ACGGGGAGGAACTAGCTCCATCCGGGATGGTCTGACCGAGACGCAGTACG
ATAGTGACGGGAGTGCAGAGGACGACGTTTTTTAA back to top
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